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Class of '14

Doctorate of Philosophy

abbott

Jason Robert Abbott


Studies Toward the Total Synthesis of Incednine


Advisor: William R. Roush, PhD, Associate Dean of Graduate Studies, Florida; Professor, Department of Chemistry


albertshofer

Klaus Albertshofer


Part 1: Diversity Oriented Construction of Carbocyclic Spiro-3 3'-Oxindole-Derived Core Structures via Asymmetric Organocatalytic Tandem Processes; Part 2: Assembly of Syn-1 2- Diol-Containing Target Molecules via Asymmetric Organocatalytic Aldol Reactions


Advisor: Carlos F. Barbas III PhD, Professor, Departments of Chemistry and Cell and Molecular Biology


aoto

Phillip Aoto


Structure and Dynamics of a Protein Kinase


Advisor: Peter E. Wright, PhD, Professor, Department of Integrative Structural and Computational Biology


boregowda

Siddaraju V. Boregowda


TWIST1 Regulates Growth, Multi-potency and Non-progenitor Functions of Mesenchymal Stem Cells


Advisor: Donald G. Phinney, PhD, Professor, Department of Molecular Therapeutics


coleman

Ronald Leroy Coleman


Regenerative Medicine and Multiple Sclerosis: Toward Clinical Intervention


Advisor: Jeanne F. Loring, PhD, Professor of Developmental Neurobiology, Department of Chemical Physiology


diez

Peter S. Diez


Stereoselective Synthesis of Skipped-Polyenes and Deoxypropionates via Titanium-Mediated Reductive Cross-Coupling of Allylic-Alcohols and Alkynes


Advisor: Glenn Micalizio, PhD, Professor, Dartmouth College, Department of Chemistry


dillon

Myles B.C. Dillon


Understanding the Function of Arginine Methylation in Pancreatic Beta Cells: Developing Tools to Modulate the Activity of Protein Arginine Methyltransferases


Advisor: Kerri A. Mowen, PhD, Assistant Professor, Department of Chemical Physiology


duncan

Katharine K. Duncan


α-Ketoheterocycle Inhibitors of Fatty Acid Amide Hydrolase: Exploration of Conformational Constraints in the Acyl Side Chain


Advisor: Dale L. Boger, PhD, Professor and Chair, Department of Chemistry


engel

Keary Mark Engle


I. Ligand-Accelerated Catalysis in Palladium (II)-Mediated C-H Functionalization; II. Hydrogen Bonding Effects on the Reactivity of Fluoride Anion


Advisor: Jin-Quan Yu PhD, Professor, Department of Chemistry


gay

Laurie Jeanne Gay


Brain Metastasis Depends on Tumor Cell Initiated Coagulation and Tissue Factor Signaling


Advisor: Brunhilde Felding, PhD, Associate Professor, Department of Chemical Physiology


gutenkunst

Will Ryan Gutekunst


Synthesis of Cyclobutane Natural Products using C-H Functionalization Logic


Advisor: Phil S. Baran PhD, Professor, Department of Chemistry


hazen

Jennifer L. Hazen


Reprogramming and Neuronal Genomes


Advisor: Kristin K. Baldwin, PhD, Associate Professor, Department of Molecular and Cellular Neuroscience


hsu

Pei-hsin Hsu


In vivo Evidence for Ndc80p Regulated Kinetochore-Microtubule Slippage


Advisor: Gaudenz Danuser, PhD, Professor, Department of Cell Biology, Harvard University


jardine

Joseph G. Jardine


Development of Germline-Targeting Immunogens and Determination of Minimal Maturation antibodies against HIV Requirements for VRC01-class Broadly Neutralizing


Advisor: William G. Schief, PhD, Professor of Immunology, Department of Immunology and Microbial Science


kang

Mingchao Kang


Genetic Incorporation of Unnatural Amino Acids and its Applications


Advisor: Peter G. Schultz, PhD, Professor, Department of Chemistry


kim

Sung Eun Kim


Ion channels in Mechano-and Thermo-sensation


Advisor: Ardem Patapoutian, PhD, Professor, Department of Molecular and Cellular Neuroscience


kwong

Jinny Kwong


p38 MAPK Family: Their Regulation, Function and Role in Ras-induced Senescence


Advisor: Peiqing Sun, PhD, Associate Professor, Department of Cell and Molecular Biology


lee

Peter Sung Keun Lee


Recognition of Functionally Conserved Neutralizing Epitopes on Influenza Virus Hemagglutinin


Advisor: Ian A. Wilson, PhD, Professor and Chair, Department of Integrative Structural and Computational Biology


liu

Jeffrey J. Liu


Biophysical Investigation of G-protein Coupled Receptor


Advisor: Raymond C. Stevens, PhD, Professor, Department of Integrative Structural and Computational Biology


lyumkis

Dmitry Lyumkis


Heterogeneous Macromolecular Machines Analyzed by Single-Particle Electron


Advisor: Bridget Carragher, PhD, Professor of Cell Biology, Department of Integrative Structural and Computational Biology


malyshev

Denis A. Malyshev


Expansion of the Genetic Alphabet in vitro and in vivo


Advisor: Floyd E. Romesberg, PhD, Associate Professor, Department of Chemistry


martin

Christopher E. Martin


IL-7 Homeostasis and T Cell Behavior


Advisor: Charles D. Surh, PhD, Professor, Department of T Cell Biology, Postech


mirendil

Hope Mirendil


Lysophosphatidic Acid (LPA) Receptor Signaling is Involved in Schizophrenia Development Initiated by Environmental Risk Factors


Advisor: Jerold J.M. Chun, MD, PhD, Professor


moran

Crystal R. Moran-Gutierrez


Advancing Single-Molecule Förster Resonance Energy Transfer Methods to Study Complex Protein Folding


Advisor: Ashok A. Deniz, PhD, Associate Professor, Department of Integrative Structural and Computational Biology


obtrubova

Katerina Otrubova


Rational Design of FAAH Inhibitors that Act by Covalently Bonding to Two Active Site Residues


Advisor: Dale L. Boger, PhD, Professor and Chair, Department of Chemistry


petrie

Katherine Lynn Petrie


Modeling Evolution In Vitro: Mutagenesis Neutral Drift and Fitness Landscapes


Advisor: Gerald F. Joyce, MD, PhD, Professor


ranade

Sanjeev S. Ranade


Investigating the Role of Piezo1 a Mechanically Activated Ion channel in Cardiovascular Physiology


Advisor: Ardem Patapoutian, PhD, Professor, Department of Molecular and Cellular Neuroscience


reichart

Timothy Reichart


Membrane Presentation of Peptides Modulates Neutralizing Antibody Affinity: Implications for HIV Immunogen Design


Advisor: Philip E. Dawson, PhD, Associate Dean of Graduate Studies, California; Associate Professor, Department of Cell and Molecular Biology


sok

Devin Sok


Defining Sites of Vulnerability on HIV Env with Diverse Broadly Neutralizing Antibodies to Facilitate Vaccine Design


Advisor: Dennis R. Burton, PhD, Professor, Department of Immunology and Microbial Science


song

Youngzee Song


Understanding the Consequences of Mistranslation Caused by Aminoacyl-tRNA Synthetases


Advisor: Paul Schimmel, PhD, Professor, Cell and Molecular Biology


sun

Sophie B. Sun


Elucidating Protein Evolution through Structural Analysis and Expansion of the Genetic Code


Advisor: Peter G. Schultz, PhD, Professor, Department of Chemistry


tan

Yun Lei Tan


Biological and Chemical Approaches to Enhance Protein Folding and Function


Advisor: Jeffery W. Kelly, PhD, Professor and Chair, Department of Molecular and Experimental Medicine


tuesta

Luis Miguel Tuesta


The Role of Brain Glucagon-Like Peptide-1 in Regulating the Reinforcing Properties of Nicotine


Advisor: Paul J. Kenny, PhD, Professor and Chair, Mount Sinai School of Medicine, Department of Pharmacology and Systems Therapeutics

vickers

Chris J. Vickers


Activation, Inhibition, and Detection of Caspases Using Chemical Tools


Advisor: Dennis W. Wolan, PhD, Assistant Professor, Department of Molecular and Experimental Medicine


wacker

Daniel Wacker


Structural Basis of Hallucinogen Signaling through Serotonin and Opioid Receptors


Advisor: Raymond C. Stevens, PhD, Professor, Department of Integrative Structural and Computational Biology


weiser

Briana M. Weiser


Nipsnap1: A Key Transition Factor in the Hepatitis C Viral Lifecycle


Advisor: Timothy L. Tellinghuisen, PhD, Associate Professor, Department of Infectious Diseases


wolfe

Amanda L. Wolfe


Synthesis and Evaluation of Cyclic seco-CBI-indole2 Prodrugs and Water-Soluble Duocarmycin Analogs


Advisor: Dale L. Boger, PhD, Professor and Chair, Department of Chemistry


worrell

Brady T. Worrell


Old Dog New Tricks: Synthetic and Mechanistic Implications of Internal Alkynes in the CuAAC


Advisor: Valery V. Fokin, PhD, Associate Professor, Department Chemistry






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