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Tools for Computational Biology and Bioinformatics

Tailored toward experimental biologists

  • BioGPS: A gene annotation portal emphasizing user customizability and community extensibility
  • Gene Wiki: Creating a collaboratively-written, community-reviewed, and continuously-updated review article for every human gene

Tailored toward computational biologists

  • CAFET: Pathway-based enrichment analysis 
  • Web services for gene annotation
  • CRISP: Comprehensive Read Analysis for Identification of Single Nucleotide Polymorphisms
  • MDMR: Multivariate Distance Matrix Regression
  • SNIP-Seq: Single nucleotide polymorphism identification from population sequence
  • HapCUT: for Next-generation sequence data
  • MAMA: Multivariate Association Mapping Algorithms
  • SNPEM: SNP-Expectation Maximization (SNPEM)