Reddy Lab Home Page

Publications:

1.         Venkataraman, S., Reddy, S.P., Loo, J., Idamakanti, N., Hallenbeck, P.L. and Reddy, V.S. (2008) Crystallization and preliminary X-ray diffraction studies of Seneca Valley Virus-001, a new member of the Picornaviridae family. Acta Crystallogr Sect F Struct Biol Cryst Commun, 64, 293-296.

2.         Pache, L., Venkataraman, S., Reddy, V.S. and Nemerow, G.R. (2008) Structural Variations in Species B Adenovirus Fibers Impact CD46 Association. J Virol.

3.         Pache, L., Venkataraman, S., Nemerow, G.R. and Reddy, V.S. (2008) Conservation of fiber structure and CD46 usage by subgroup B2 adenoviruses. Virology.

4.         Carrillo-Tripp, M., Brooks, C.L., 3rd and Reddy, V.S. (2008) A novel method to map and compare protein-protein interactions in spherical viral capsids. Proteins, 73, 644-655.

5.         Nguyen, H.D., Reddy, V.S. and Brooks, C.L., 3rd. (2007) Deciphering the kinetic mechanism of spontaneous self-assembly of icosahedral capsids. Nano Lett, 7, 338-344.

6.         Manayani, D.J., Thomas, D., Dryden, K.A., Reddy, V., Siladi, M.E., Marlett, J.M., Rainey, G.J., Pique, M.E., Scobie, H.M., Yeager, M. et al. (2007) A viral nanoparticle with dual function as an anthrax antitoxin and vaccine. PLoS Pathog, 3, 1422-1431.

7.         Lad, S.P., Yang, G., Scott, D.A., Wang, G., Nair, P., Mathison, J., Reddy, V.S. and Li, E. (2007) Chlamydial CT441 Is a PDZ Domain-Containing Tail-Specific Protease That Interferes with the NF-{kappa}B Pathway of Immune Response. J Bacteriol, 189, 6619-6625.

8.         Kumar, S., Ochoa, W., Kobayashi, S. and Reddy, V.S. (2007) Presence of a surface-exposed loop facilitates trypsinization of particles of Sinsiro virus, a genogroup II.3 norovirus. J Virol, 81, 1119-1128.

9.         Taylor, D.J., Speir, J.A., Reddy, V., Cingolani, G., Pringle, F.M., Ball, L.A. and Johnson, J.E. (2006) Preliminary x-ray characterization of authentic providence virus and attempts to express its coat protein gene in recombinant baculovirus. Arch Virol, 151, 155-165.

10.       Shepherd, C.M., Borelli, I.A., Lander, G., Natarajan, P., Siddavanahalli, V., Bajaj, C., Johnson, J.E., Brooks, C.L., 3rd and Reddy, V.S. (2006) VIPERdb: a relational database for structural virology. Nucleic Acids Res, 34, D386-389.

11.       Hsu, C., Singh, P., Ochoa, W., Manayani, D.J., Manchester, M., Schneemann, A. and Reddy, V.S. (2006) Characterization of polymorphism displayed by the coat protein mutants of tomato bushy stunt virus. Virology, 349, 222-229.

12.       Shepherd, C.M. and Reddy, V.S. (2005) Extent of protein-protein interactions and quasi-equivalence in viral capsids. Proteins, 58, 472-477.

13.       Reddy, V.S. and Johnson, J.E. (2005) Structure-derived insights into virus assembly. Adv Virus Res, 64, 45-68.

14.       Natarajan, P., Lander, G.C., Shepherd, C.M., Reddy, V.S., Brooks, C.L., 3rd and Johnson, J.E. (2005) Exploring icosahedral virus structures with VIPER. Nat Rev Microbiol, 3, 809-817.

15.       Mitra, A.K., Ren, G., Reddy, V.S., Cheng, A. and Froger, A. (2002) The architecture of a water-selective pore in the lipid bilayer visualized by electron crystallography in vitreous ice. Novartis Found Symp, 245, 33-46; discussion 46-50; 165-168.

16.       Damodaran, K.V., Reddy, V.S., Johnson, J.E. and Brooks, C.L., 3rd. (2002) A general method to quantify quasi-equivalence in icosahedral viruses. J Mol Biol, 324, 723-737.

17.       Ren, G., Reddy, V.S., Cheng, A., Melnyk, P. and Mitra, A.K. (2001) Visualization of a water-selective pore by electron crystallography in vitreous ice. Proc Natl Acad Sci U S A, 98, 1398-1403.

18.       Reddy, V.S., Natarajan, P., Okerberg, B., Li, K., Damodaran, K.V., Morton, R.T., Brooks, C.L., 3rd and Johnson, J.E. (2001) Virus Particle Explorer (VIPER), a website for virus capsid structures and their computational analyses. J Virol, 75, 11943-11947.

19.       Ren, G., Cheng, A., Reddy, V., Melnyk, P. and Mitra, A.K. (2000) Three-dimensional fold of the human AQP1 water channel determined at 4 A resolution by electron crystallography of two-dimensional crystals embedded in ice. J Mol Biol, 301, 369-387.

20.       Oliveira, A.C., Gomes, A.M., Almeida, F.C., Mohana-Borges, R., Valente, A.P., Reddy, V.S., Johnson, J.E. and Silva, J.L. (2000) Virus maturation targets the protein capsid to concerted disassembly and unfolding. J Biol Chem, 275, 16037-16043.

21.       Bothner, B., Schneemann, A., Marshall, D., Reddy, V., Johnson, J.E. and Siuzdak, G. (1999) Crystallographically identical virus capsids display different properties in solution. Nat Struct Biol, 6, 114-116.

22.       Tsuruta, H., Reddy, V.S., Wikoff, W.R. and Johnson, J.E. (1998) Imaging RNA and dynamic protein segments with low-resolution virus crystallography: experimental design, data processing and implications of electron density maps. J Mol Biol, 284, 1439-1452.

23.       Schneemann, A., Reddy, V. and Johnson, J.E. (1998) The structure and function of nodavirus particles: a paradigm for understanding chemical biology. Adv Virus Res, 50, 381-446.

24.       Reddy, V.S., Giesing, H.A., Morton, R.T., Kumar, A., Post, C.B., Brooks, C.L., 3rd and Johnson, J.E. (1998) Energetics of quasiequivalence: computational analysis of protein-protein interactions in icosahedral viruses. Biophys J, 74, 546-558.

25.       Johnson, J.E. and Reddy, V.S. (1998) Biggest virus molecular structure yet! Nat Struct Biol, 5, 849-854.

26.       Kumar, A., Reddy, V.S., Yusibov, V., Chipman, P.R., Hata, Y., Fita, I., Fukuyama, K., Rossmann, M.G., Loesch-Fries, L.S., Baker, T.S. et al. (1997) The structure of alfalfa mosaic virus capsid protein assembled as a T=1 icosahedral particle at 4.0-A resolution. J Virol, 71, 7911-7916.

27.       Munshi, S., Liljas, L., Cavarelli, J., Bomu, W., McKinney, B., Reddy, V. and Johnson, J.E. (1996) The 2.8 A structure of a T = 4 animal virus and its implications for membrane translocation of RNA. J Mol Biol, 261, 1-10.

28.       Zlotnick, A., Reddy, V.S., Dasgupta, R., Schneemann, A., Ray, W.J., Jr., Rueckert, R.R. and Johnson, J.E. (1994) Capsid assembly in a family of animal viruses primes an autoproteolytic maturation that depends on a single aspartic acid residue. J Biol Chem, 269, 13680-13684.

29.       Wery, J.P., Reddy, V.S., Hosur, M.V. and Johnson, J.E. (1994) The refined three-dimensional structure of an insect virus at 2.8 A resolution. J Mol Biol, 235, 565-586.

30.       Johnson, J.E., Munshi, S., Liljas, L., Agrawal, D., Olson, N.H., Reddy, V., Fisher, A., McKinney, B., Schmidt, T. and Baker, T.S. (1994) Comparative studies of T = 3 and T = 4 icosahedral RNA insect viruses. Arch Virol Suppl, 9, 497-512.

31.       Cheng, R.H., Reddy, V.S., Olson, N.H., Fisher, A.J., Baker, T.S. and Johnson, J.E. (1994) Functional implications of quasi-equivalence in a T = 3 icosahedral animal virus established by cryo-electron microscopy and X-ray crystallography. Structure, 2, 271-282.

32.       Reddy, V.S. and Rao, V.S. (1992) Modes of binding of alpha (1-2) linked manno-oligosaccharides to concanavalin A. Int J Biol Macromol, 14, 185-192.