Imagene

ImaGene is a commercial image analysis software produced by Biodiscovery. It processes an image by identifying spots, calculating background, and generating signal intensities based on user-selected parameters.

http://www.biodiscovery.com/imagene.asp

Features:

• Automated quality control with automatic flagging
• Advanced image segmentation algorithms for contamination removal
• Integrated data visualization tools for quality, trend and regulation assessment
• Ability to highlight gene IDs imported from a file as a control type
• Robust algorithms for grid finding, spot adjustment and segmentation

Input:

Raw image .TIF files

Output:

Tab-delimited text file of signal intensities

Availability:

The Core Facility has a site license for ImaGene 4.1. Please call the Core Facility at (858) 784-2263 to set up a time you would like to use the ImaGene software. The version 5.6 software is available for purchase through the Biodiscovery website.

Figure 1. ImaGene 4.0 software screen shot