Bioconductor
Bioconductor is an open source and open development software project for the analysis and comprehension of genomic data.
Features:
- Access to powerful statistical and graphical methods for analysis
- Integration of biological metadata in the analysis of experimental data
- Rapid development of extensible, scalable, and interoperable software
- High-quality documentation and reproducible research
- Packages run through the R GUI
Input:
Depending on the package, anything from raw image files to processed data files
Output:
Depending on the package and the input, anything from raw signal intensities to fully annotated and processed data files
Availability:
All packages available for download through the Bioconductor website
Figure 1. Bioconductor software maBoxplot screenshot

