Recent PDB releases or updates: week of 2 October 2009

• 1agy.pdb. serine esterase 26-mar-97 1agy
  Title: the 1.15 angstrom refined structure of fusarium solani pisi cutinase
  Author: a. nicolas, c. martinez, c. cambillau
  Keywords: serine esterase, glycoprotein
  
• 1dy5.pdb. hydrolase 27-jan-00 1dy5
  Title: deamidated derivative of bovine pancreatic ribonuclease
  Author: l. esposito, l. vitagliano, f. sica, a. zagari, l. mazzarella
  Keywords: ribonuclease, deamidation, ultra-high resolution
  
• 1gjn.pdb. oxygen transport 27-jul-01 1gjn Fe
  Title: hydrogen peroxide derived myoglobin compound ii at ph 5.2
  Author: h. -p. hersleth, b. dalhus, c. h. gorbitz, k. k. andersson
  Keywords: reaction intermediate, haem, heme, oxygen activation, peroxidase, monooxygenase, ferryl, hydroxy radical
  
• 1jnb.pdb. viral protein 23-jul-01 1jnb
  Title: connector protein from bacteriophage phi29
  Author: a. a. simpson, p. g. leiman, y. tao, y. he, m. o. badasso, p. j. jardine, d. l. anderson, m. g. rossmann
  Keywords: viral protein
  
• 1qbv.pdb. hydrolase 27-apr-99 1qbv
  Title: crystal structure of thrombin complexed with an guanidine- mimetic inhibitor
  Author: r. bone, t. lu, c. r. illig, r. m. soll, j. c. spurlino
  Keywords: inhibitor, 3dp, hydrolase
  
• 1yvs.pdb. endonuclease 10-dec-98 1yvs
  Title: trimeric domain swapped barnase
  Author: i. zegers, l. wyns
  Keywords: ribonuclease, domain swapped, trimer
  
• 2bum.pdb. oxidoreductase 14-jun-05 2bum Fe
  Title: crystal structure of wild-type protocatechuate 3,4- dioxygenase from acinetobacter sp. adp1
  Author: m. w. vetting, m. p. valley, d. a. d'argenio, l. n. ornston, j. d. lipscomb, d. h. ohlendorf
  Keywords: dioxygenase, aromatic degradation, non-heme iron, beta-sandwich, mixed alpha/beta structure
  
• 2but.pdb. oxidoreductase 17-jun-05 2but Fe
  Title: crystal structure of protocatechuate 3,4-dioxygenase from acinetobacter sp. adp1 mutant r457s - apo
  Author: m. w. vetting, m. p. valley, d. a. d'argenio, l. n. ornston, j. d. lipscomb, d. h. ohlendorf
  Keywords: aromatic degradation, non-heme iron, aromatic hydrocarbons catabolism, iron, oxidoreductase, metal-binding
  
• 2bux.pdb. oxidoreductase 20-jun-05 2bux Fe
  Title: crystal structure of protocatechuate 3,4-dioxygenase from acinetobacter sp. adp1 mutant r133h
  Author: m. w. vetting, m. p. valley, d. a. d'argenio, l. n. ornston, j. d. lipscomb, d. h. ohlendorf
  Keywords: aromatic degradation, non-heme iron, aromatic hydrocarbons catabolism, iron, oxidoreductase, metal-binding
  
• 2ca3.pdb. oxidoreductase 16-dec-05 2ca3 Mo Fe
  Title: sulfite dehydrogenase from starkeya novella r55m mutant
  Author: s. bailey, u. kappler, c. feng, m. j. honeychurch, p. v. bernhardt, g. tollin, j. h. enemark
  Keywords: molybdopterin, c-type cytochrome, heme, mutant, oxidoreductase
  
• 2ca4.pdb. oxidoreductase 16-dec-05 2ca4 Mo Fe
  Title: sulfite dehydrogenase from starkeya novella mutant
  Author: s. bailey, u. kappler
  Keywords: molybdopterin, c-type cytochrome, heme, mutant, oxidoreductase
  
• 2gow.pdb. structural genomics, unknown function 14-apr-06 2gow (solution NMR)
  Title: solution structure of bc059385 from homo sapiens
  Author: b. f. volkman, n. b. de la cruz, b. l. lytle, f. c. peterson, center for eukaryotic structural genomics (cesg)
  Keywords: structural genomics, protein structure initiative, psi, center for eukaryotic structural genomics, cesg, unknown function
  
• 2htr.pdb. hydrolase 26-jul-06 2htr
  Title: n8 neuraminidase in complex with dana
  Author: r. j. russell, l. f. haire, d. j. stevens, p. j. collins, y. p. lin, g. m. blackburn, a. j. hay, s. j. gamblin, j. j. skehel
  Keywords: neuraminidase, dana, hydrolase
  
• 2hty.pdb. hydrolase 26-jul-06 2hty Ca
  Title: n1 neuraminidase
  Author: r. j. russell, l. f. haire, d. j. stevens, p. j. collins, y. p. lin, g. m. blackburn, a. j. hay, s. j. gamblin, j. j. skehel
  Keywords: neuraminidase, hydrolase
  
• 2hu0.pdb. hydrolase 26-jul-06 2hu0
  Title: n1 neuraminidase in complex with oseltamivir 1
  Author: r. j. russell, l. f. haire, d. j. stevens, p. j. collins, y. p. lin, g. m. blackburn, a. j. hay, s. j. gamblin, j. j. skehel
  Keywords: neuraminidase, oseltamivir, hydrolase
  
• 2hu4.pdb. hydrolase 26-jul-06 2hu4
  Title: n1 neuraminidase in complex with oseltamivir 2
  Author: r. j. russell, l. f. haire, d. j. stevens, p. j. collins, y. p. lin, g. m. blackburn, a. j. hay, s. j. gamblin, j. j. skehel
  Keywords: neuraminidase, oseltamivir, hydrolase
  
• 2i1n.pdb. signaling protein 14-aug-06 2i1n Na
  Title: crystal structure of the 1st pdz domain of human dlg3
  Author: a. p. turnbull, c. phillips, g. bunkoczi, j. debreczeni, e. ugochukwu, a. c. w. pike, f. gorrec, c. umeano, j. elkins, g. berridge, p. savitsky, o. gileadi, f. von delft, j. weigelt, a. edwards, c. arrowsmith, m. sundstrom, d. doyle, structural genomics consortium (sgc)
  Keywords: pdz, pdz domain, signal transduction, structural genomics, structural genomics consortium, sgc, signaling protein
  
• 2i9y.pdb. structural genomics, unknown function 06-sep-06 2i9y (solution NMR)
  Title: solution structure of arabidopsis thaliana protein at1g70830, a member of the major latex protein family
  Author: b. f. volkman, n. b. de la cruz, b. l. lytle, f. c. peterson, center for eukaryotic structural genomics (cesg)
  Keywords: bet v1-like, structural genomics, protein structure initiative, psi, center for eukaryotic structural genomics, cesg, unknown function
  
• 2jk2.pdb. isomerase 22-jun-08 2jk2
  Title: structural basis of human triosephosphate isomerase deficiency. crystal structure of the wild type enzyme.
  Author: c. rodriguez-almazan, r. arreola-alemon, d. rodriguez-larrea, b. aguirre-lopez, m. t. de gomez-puyou, r. perez-montfort, m. costas, a. gomez-puyou, a. torres-larios
  Keywords: alternative splicing, fatty acid biosynthesis, lipid synthesis, disease mutation, pentose shunt, phosphoprotein, gluconeogenesis, glycolysis, acetylation, polymorphism
  
• 2k07.pdb. structural genomics, unknown function 25-jan-08 2k07 (solution NMR)
  Title: solution nmr structure of human e2-like ubiquitin-fold modifier conjugating enzyme 1 (ufc1). northeast structural genomics consortium target hr41
  Author: g. liu, a. eletsky, h. s. atreya, j. m. aramini, r. xiao, t. acton, g. t. montelione, t. szyperski, northeast structural genomics consortium (nesg)
  Keywords: unknown function
  
• 2k2n.pdb. transferase 04-apr-08 2k2n (solution NMR)
  Title: solution structure of a cyanobacterial phytochrome gaf domain in the red light-absorbing ground state
  Author: c. c. cornilescu, g. cornilescu, a. t. ulijasz, r. d. vierstra, j. l. markley
  Keywords: gaf domain, phycocyanobilin, pcb, bacteriophytochrome, cyanobacterial phytochrome, kinase, phosphoprotein, transferase
  
• 2kby.pdb. transcription 12-dec-08 2kby (solution NMR)
  Title: the tetramerization domain of human p73
  Author: d. coutandin, t. ikeya, f. loehr, p. guntert, h. d. ou, v. doetsch
  Keywords: activator, alternative splicing, anti-oncogene, apoptosis, cell cycle, dna-binding, metal- binding, nucleus, phosphoprotein, transcription, transcription regulation, ubl conjugation, zinc
  
• 2kdr.pdb. viral protein, membrane protein 15-jan-09 2kdr (solution NMR)
  Title: solution structure of hcv ns4b(227-254)
  Author: r. montserret, f. penin
  Keywords: ns4b, 227-254 segment, membranous web, replication complex, membrane, transmembrane, rna-binding, palmitate, viral protein, membrane protein
  
• 2kec.pdb. cytokine 28-jan-09 2kec (solution NMR)
  Title: structure of sdf-1/cxcl12
  Author: b. f. volkman, c. t. veldkamp, f. c. peterson
  Keywords: sdf1-alpha, cxcl12, chemokine, alternative splicing, chemotaxis, cytokine, growth factor, secreted
  
• 2ked.pdb. cytokine 28-jan-09 2ked (solution NMR)
  Title: structure of sdf-1/cxcl12
  Author: b. f. volkman, c. t. veldkamp, f. c. peterson
  Keywords: sdf1-alpha, cxcl12, chemokine, alternative splicing, chemotaxis, cytokine, growth factor, secreted
  
• 2kee.pdb. cytokine 28-jan-09 2kee (solution NMR)
  Title: structure of sdf-1/cxcl12
  Author: b. f. volkman, c. t. veldkamp, f. c. peterson
  Keywords: sdf1-alpha, cxcl12, chemokine, alternative splicing, chemotaxis, cytokine, growth factor, secreted
  
• 2kia.pdb. motor protein 29-apr-09 2kia (solution NMR)
  Title: solution structure of myosin vi c-terminal cargo-binding domain
  Author: w. feng, c. yu, z. wei, y. miyanoiri, m. zhang
  Keywords: endocytosis, golgi apparatus, hearing, membrane, motor protein, myosin, nucleotide- binding, nucleus, phosphoprotein, protein transport, transport
  
• 2kjy.pdb. signaling protein 11-jun-09 2kjy (solution NMR)
  Title: mypt1(658-714)
  Author: s. mori, r. iwaoka, m. eto, s. ohki
  Keywords: phosphorylation, protein phosphatase 1, myosin phosphatase, alternative splicing, ank repeat, cytoplasm, phosphoprotein, polymorphism, signaling protein
  
• 2kld.pdb. membrane protein 01-jul-09 2kld (solution NMR)
  Title: solution structure of the calcium binding domain of the c- terminal cytosolic domain of polycystin-2
  Author: h. r. kalbitzer
  Keywords: membrane protein
  
• 2kle.pdb. membrane protein 01-jul-09 2kle (solution NMR)
  Title: isic refined solution structure of the calcium binding domain of the c-terminal cytosolic domain of polycystin-2
  Author: h. r. kalbitzer
  Keywords: membrane protein
  
• 2kmf.pdb. photosynthesis 28-jul-09 2kmf (solution NMR)
  Title: solution structure of psb27 from cyanobacterial photosystem ii
  Author: p. d. mabbitt, g. j. p. rautureau, c. l. day, s. m. wilbanks, j. j. eaton- rye, m. g. hinds
  Keywords: photosystem ii, structure, helical bundle, cyanobacteria, photosynthesis
  
• 2kn6.pdb. apoptosis 16-aug-09 2kn6 (solution NMR)
  Title: structure of full-length human asc (apoptosis-associated speck-like protein containing a card)
  Author: e. de alba
  Keywords: interdomain mobility, death domain, apoptosis, inflammation
  
• 2knc.pdb. cell adhesion 20-aug-09 2knc (solution NMR)
  Title: platelet integrin alfaiib-beta3 transmembrane-cytoplasmic heterocomplex
  Author: j. yang, y. ma, r. c. page, s. misra, e. f. plow, j. qin
  Keywords: polymorphism, pyrrolidone carboxylic acid, receptor, transmembrane, host- virus interaction, phosphoprotein
  
• 2knk.pdb. dna 26-aug-09 2knk (solution NMR)
  Title: structure of the trimethylene n2-dg:n2-dg interstrand cross- link in 5'-cpg-3' sequence context
  Author: h. huang, p. a. dooley, c. m. harris, t. m. harris, m. p. stone
  Keywords: trimethylene, cpg sequence context, dna
  
• 2knl.pdb. dna 26-aug-09 2knl (solution NMR)
  Title: structure of the trimethylene n2-dg:n2-dg interstrand cross- link in the 5'-gpc-3' sequence context
  Author: h. huang, p. a. dooley, c. m. harris, t. m. harris, m. p. stone
  Keywords: trimethylene, gpc sequence context, dna
  
• 2ko1.pdb. transferase 08-sep-09 2ko1 (solution NMR)
  Title: solution nmr structure of the act domain from gtp pyrophosphokinase of chlorobium tepidum. northeast structural genomics consortium target ctr148a
  Author: a. eletsky, e. garcia, h. wang, c. ciccosanti, m. jiang, r. nair, b. rost, t. b. acton, r. xiao, j. k. everett, h. lee, j. h. prestegard, g. t. montelione, t. szyperski, northeast structural genomics consortium (nesg)
  Keywords: alpha+beta, kinase, transferase, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
  
• 2ko7.pdb. isomerase 11-sep-09 2ko7 (solution NMR)
  Title: solution structure of peptidyl-prolyl cis-trans isomerase from burkholderia pseudomallei complexed with cycloheximide-n-ethylethanoate
  Author: n. zheng, t. leeper, g. varani
  Keywords: fkbp, cycloheximide-n-ethylethanoate, nmr, complex, isomerase, rotamase, structural genomics, ssgcid, seattle structural genomics center for infectious disease
  
• 2kob.pdb. structural genomics, unknown function 15-sep-09 2kob (solution NMR)
  Title: solution nmr structure of clolep_01837 (fragment 61-160) from clostridium leptum. northeast structural genomics consortium target qlr8a
  Author: t. a. ramelot, d. lee, c. ciccosanti, m. jiang, r. nair, b. rost, t. b. acton, r. xiao, j. k. everett, g. t. montelione, m. a. kennedy, northeast structural genomics consortium (nesg)
  Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, unknown function
  
• 2oz2.pdb. hydrolase 23-feb-07 2oz2
  Title: crystal structure analysis of cruzain bound to vinyl sulfone derived inhibitor (k11777)
  Author: m. rickert, l. brinen
  Keywords: covalent inhibitor, vinyl sulfoneamide derived, hydrolase
  
• 2p7u.pdb. hydrolase 20-mar-07 2p7u
  Title: the crystal structure of rhodesain, the major cysteine protease of t. brucei rhodesiense, bound to inhibitor k777
  Author: l. s. brinen, r. marion
  Keywords: trypanosoma brucei, neglected disease, hydrolase
  
• 2qe3.pdb. cytokine 22-jun-07 2qe3 Cl
  Title: crystal structure of human tl1a extracellular domain
  Author: c. zhan, q. yan, y. patskovsky, w. shi, r. toro, j. bonanno, s. g. nathenson, s. c. almo
  Keywords: tnfsf, cytokine;
  
• 2qje.pdb. hydrolase 07-jul-07 2qje Zn Fe
  Title: crystal structure of the complex of bovine c-lobe with amygdalin at 2.3a resolution
  Author: r. mir, r. jain, s. kumar, m. sinha, n. singh, s. sharma, p. kaur, a. srinivasan, a. bhushan, t. p. singh
  Keywords: c-lobe, aymgdalin, antibiotic, antimicrobial, glycoprotein, hydrolase, ion transport, iron, iron transport, metal-binding, protease, secreted, serine protease, transport
  
• 2r96.pdb. oxidoreductase, electron transport 12-sep-07 2r96
  Title: crystal structure of e. coli wrba in complex with fmn
  Author: i. kuta smatanova, j. wolfova, j. brynda, j. r. mesters, r. grandori, j. carey
  Keywords: quinone oxidoreductase, flavoprotein, flavodoxin-like fold, fmn-binding, oxidoreductase
  
• 2r97.pdb. oxidoreductase, electron transport 12-sep-07 2r97
  Title: crystal structure of e. coli wrba in complex with fmn
  Author: i. kuta smatanova, j. wolfova, j. brynda, j. r. mesters, r. grandori, j. carey
  Keywords: quinone oxidoreductase, flavoprotein, flavodoxin-like fold, fmn-binding, oxidoreductase
  
• 2rg1.pdb. oxidoreductase, electron transport 02-oct-07 2rg1 Cl
  Title: crystal structure of e. coli wrba apoprotein
  Author: i. kuta smatanova, j. wolfova, j. brynda, m. lapkouski, j. r. mesters, r. grandori, j. carey
  Keywords: quinone oxidoreductase, flavoprotein, flavodoxin-like fold, fmn-binding, oxidoreductase
  
• 2rgh.pdb. oxidoreductase 01-oct-07 2rgh Se
  Title: structure of alpha-glycerophosphate oxidase from streptococcus sp.: a template for the mitochondrial alpha- glycerophosphate dehydrogenase
  Author: t. colussi, w. boles, t. c. mallett, p. a. karplus, a. claiborne
  Keywords: oxidoreductase
  
• 2rgo.pdb. oxidoreductase 04-oct-07 2rgo
  Title: structure of alpha-glycerophosphate oxidase from streptococcus sp.: a template for the mitochondrial alpha- glycerophosphate dehydrogenase
  Author: t. colussi, w. boles, t. c. mallett, p. a. karplus, a. claiborne
  Keywords: oxidoreductase
  
• 2ric.pdb. sugar binding protein 10-oct-07 2ric Ca
  Title: crystal structure of the trimeric neck and carbohydrate recognition domain of human surfactant protein d in complex with l-glycero-d-manno-heptopyranosyl-(1-3)-l-glycero-d- manno-heptopyranose
  Author: h. wang, j. head, p. kosma, s. sheikh, b. mcdonald, k. smith, t. cafarella, b. seaton, e. crouch
  Keywords: sugar binding protein
  
• 2rjk.pdb. cytokine 15-oct-07 2rjk
  Title: crystal structure of human tl1a extracellular domain c95s mutant
  Author: c. zhan, q. yan, y. patskovsky, w. shi, u. a. ramagopal, r. toro, j. bonanno, s. g. nathenson, s. c. almo
  Keywords: tnfsf, cytokine, mutant, membrane, transmembrane
  
• 2rjl.pdb. cytokine 15-oct-07 2rjl
  Title: crystal structure of human tl1a extracellular domain c95s/c135s mutant
  Author: c. zhan, y. patskovsky, q. yan, w. shi, r. toro, j. bonanno, s. g. nathenson, s. c. almo
  Keywords: tnfsf, cytokine, mutant, membrane, transmembrane
  
• 2rqe.pdb. sugar binding protein 22-apr-09 2rqe (solution NMR)
  Title: solution structure of the silkworm bgrp/gnbp3 n-terminal domain reveals the mechanism for b-1,3-glucan specific recognition
  Author: k. takahasi, m. ochiai, m. horiuchi, h. kumeta, k. ogura, m. ashida, f. inagaki
  Keywords: beta-1,3-glucan, glycoprotein, immune response, innate immunity, secreted, sugar binding protein
  
• 2v1e.pdb. oxygen transport 23-may-07 2v1e Fe
  Title: crystal structure of radiation-induced myoglobin compound ii - intermediate h at ph 6.8
  Author: h. -p. hersleth, c. h. gorbitz, k. k. andersson
  Keywords: oxygen transport, oxygen activation, haem, iron, heme, ferryl, transport, peroxidase, reaction intermediate, monooxygenase, metal-binding, muscle protein
  
• 2v1f.pdb. oxygen transport 24-may-07 2v1f Fe
  Title: crystal structure of radiation-induced myoglobin compound ii - intermediate h at ph 8.7
  Author: h. -p. hersleth, c. h. gorbitz, k. k. andersson
  Keywords: oxygen transport, oxygen activation, peroxidase, monooxygenase, metal-binding, reaction intermediate, heme, ferryl, transport, haem, iron, radiation
  
• 2v1g.pdb. oxygen transport 24-may-07 2v1g Fe
  Title: crystal structure of radiation-induced myoglobin compound ii - intermediate h at ph 5.2
  Author: h. -p. hersleth, b. dalhus, c. h. gorbitz, k. k. andersson
  Keywords: oxygen transport, oxygen activation, peroxidase, monooxygenase, metal-binding, reaction intermediate, heme, ferryl, transport, haem, iron, radiation
  
• 2vcm.pdb. oxidoreductase 25-sep-07 2vcm Fe
  Title: isopenicillin n synthase with substrate analogue asmcov
  Author: w. ge, i. j. clifton, r. m. adlington, j. e. baldwin, p. j. rutledge
  Keywords: penicillin biosynthesis, iron, oxygenase, vitamin c, metal-binding, monocyclic intermediate, oxidoreductase, b-lactam antibiotic
  
• 2vm0.pdb. oxygen transport 20-jan-08 2vm0 Fe
  Title: crystal structure of radiation-induced myoglobin compound ii generated after annealing of peroxymyoglobin
  Author: h. -p. hersleth, c. h. gorbitz, k. k. andersson
  Keywords: iron, heme, ferryl, transport, peroxidase, oxygen transport, oxygen activation, radiolytic- reduction, reaction intermediate, monooxygenase, metal-binding, muscle protein, x-ray-induced-photoreductio...
  
• 2vm3.pdb. oxidoreductase 22-jan-08 2vm3 Cu Zn
  Title: structure of alcaligenes xylosoxidans in space group r3 - 1 of 2
  Author: m. a. hough, s. v. antonyuk, r. w. strange, r. r. eady, s. s. hasnain
  Keywords: nitrite reductase, ordered mechanism, oxidoreductase
  
• 2vm4.pdb. oxidoreductase 22-jan-08 2vm4 Cu Zn
  Title: structure of alcaligenes xylosoxidans nitrite reductase in space group r3 - 2 of 2
  Author: m. a. hough, s. v. antonyuk, r. w. strange, r. r. eady, s. s. hasnain
  Keywords: nitrite reductase, oxidoreductase, ordered mechanism
  
• 2vom.pdb. isomerase 19-feb-08 2vom
  Title: structural basis of human triosephosphate isomerase deficiency. mutation e104d and correlation to solvent perturbation.
  Author: c. rodriguez-almazan, r. arreola-alemon, d. rodriguez-larrea, b. aguirre-lopez, m. t. de gomez-puyou, r. perez-montfort, m. costas, a. gomez-puyou, a. torres-larios
  Keywords: alternative splicing, fatty acid biosynthesis, lipid synthesis, disease mutation, pentose shunt, phosphoprotein, gluconeogenesis, glycolysis, acetylation, polymorphism
  
• 2vtw.pdb. viral protein 16-may-08 2vtw
  Title: structure of the c-terminal head domain of the fowl adenovirus type 1 short fibre
  Author: m. elbakkouri, e. seiradake, s. cusack, r. w. h. ruigrok, g. schoehn
  Keywords: celo, adenovirus, fiber protein, short fibre head
  
• 2vvg.pdb. motor protein 08-jun-08 2vvg Mg
  Title: crystal structure of the g.intestinalis kinesin 2 gikin2a motor domain
  Author: j. c. hoeng, j. loewe, s. c. dawson, w. z. cande, m. s. sagolla, j. j. mancuso
  Keywords: nucleotide-binding, kinesin motor domain, microtubule, atp-binding
  
• 2vzo.pdb. hydrolase 05-aug-08 2vzo Cd
  Title: crystal structure of amycolatopsis orientalis exo- chitosanase csxa
  Author: a. lammerts van bueren, m. g. ghinet, k. gregg, a. fleury, r. brzezinski, a. b. boraston
  Keywords: csxa, pnp-glucosamine, glycoside hydrolase, exo-beta-d-glucosaminidase, hydrolase
  
• 2vzs.pdb. hydrolase 05-aug-08 2vzs Cd
  Title: chitosan product complex of amycolatopsis orientalis exo- chitosanase csxa
  Author: a. lammerts van bueren, m. g. ghinet, k. gregg, a. fleury, r. brzezinski, a. b. boraston
  Keywords: hydrolase, gh2, csxa, glucosamine, glycoside hydrolase
  
• 2vzt.pdb. hydrolase 05-aug-08 2vzt Cd
  Title: complex of amycolatopsis orientalis exo-chitosanase csxa e541a with pnp-beta-d-glucosamine
  Author: a. lammerts van bueren, m. g. ghinet, k. gregg, a. fleury, r. brzezinski, a. b. boraston
  Keywords: csxa, pnp-glucosamine, glycoside hydrolase, exo-beta-d-glucosaminidase, hydrolase
  
• 2vzu.pdb. hydrolase 05-aug-08 2vzu Cd
  Title: complex of amycolatopsis orientalis exo-chitosanase csxa d469a with pnp-beta-d-glucosamine
  Author: a. lammerts van bueren, m. g. ghinet, k. gregg, a. fleury, r. brzezinski, a. b. boraston
  Keywords: csxa, pnp-glucosamine, glycoside hydrolase, exo-beta-d-glucosaminidase, hydrolase
  
• 2vzv.pdb. hydrolase 05-aug-08 2vzv
  Title: substrate complex of amycolatopsis orientalis exo- chitosanase csxa e541a with chitosan
  Author: a. lammerts van bueren, m. g. ghinet, k. gregg, a. fleury, r. brzezinski, a. b. boraston
  Keywords: gh2, csxa, chitosan, glycoside hydrolase, hydrolase
  
• 2w83.pdb. protein transport 08-jan-09 2w83 Mg
  Title: crystal structure of the arf6 gtpase in complex with a specific effector, jip4
  Author: t. isabet, g. montagnac, k. regazzoni, b. raynal, f. el khadali, m. franco, p. england, p. chavrier, a. houdusse, j. menetrey
  Keywords: lipoprotein, coiled coil
  
• 2w9t.pdb. oxidoreductase 28-jan-09 2w9t
  Title: staphylococcus aureus s1:dhfr
  Author: h. h. soutter, j. r. miller
  Keywords: staphylococcus aureus, dhfr, nadp, plasmid, trimethoprim, oxidoreductase, trimethoprim resistance, one-carbon metabolism, methotrexate resistance
  
• 2wc7.pdb. hydrolase 10-mar-09 2wc7
  Title: crystal structure of nostoc punctiforme debranching enzyme( npde)(acarbose soaked)
  Author: a. -b. dumbrepatil, h. -n. song, j. -h. choi, k. -h. park, e. -j. woo
  Keywords: cd/pul-hydrolyzing enzymes, nostoc, hydrolase, glycosidase, neopullulanse
  
• 2wcs.pdb. hydrolase 16-mar-09 2wcs
  Title: crystal structure of debranching enzyme from nostoc punctiforme (npde)
  Author: a. b. dumbrepatil, j. h. choi, s. h. nam, k. h. park, e. j. woo
  Keywords: maltooligosaccharides, hydrolase, glycosidase, cyanobacteria
  
• 2why.pdb. transport protein 07-may-09 2why Cl Fe
  Title: crystal structure of the triscatecholate siderophore binding protein feua from bacillus subtilis complexed with ferri-bacillibactin
  Author: f. peuckert, m. miethke, a. g. albrecht, l. -o. essen, m. a. marahiel
  Keywords: abc-type transporter binding protein, siderophore binding protein, lipoprotein, cell membrane, ion transport
  
• 2wie.pdb. hydrolase 11-may-09 2wie
  Title: high-resolution structure of the rotor ring from a proton dependent atp synthase
  Author: d. pogoryelov, o. yildiz, j. d. faraldo-gomez, t. meier
  Keywords: f1fo atp synthase rotor, ion proton-translocation, ion transport, transmembrane, c-ring structure, spirulina platensis, hydrogen ion transport, membrane protein complex, cf(0), membrane, lipid-bindin...
  
• 2wj5.pdb. chaperone 22-may-09 2wj5
  Title: rat alpha crystallin domain
  Author: c. e. naylor, c. bagneris, o. a. bateman, n. cronin, n. h. keep, c. slingsby
  Keywords: disulfide bond, stress response
  
• 2wj7.pdb. chaperone 22-may-09 2wj7
  Title: human alphab crystallin
  Author: c. e. naylor, c. bagneris, o. a. bateman, n. cronin, n. h. keep, c. slingsby
  Keywords: phosphoprotein, disease mutation, eye lens protein, methylation, polymorphism, glycoprotein, cataract, oxidation, chaperone, acetylation
  
• 2wjw.pdb. transport protein 01-jun-09 2wjw Cl
  Title: crystal structure of the human ionotropic glutamate receptor glur2 atd region at 1.8 a resolution
  Author: a. clayton, c. siebold, r. j. c. gilbert, g. c. sutton, k. harlos, r. a. j. mcilhinney, e. y. jones, a. r. aricescu
  Keywords: glutamate receptors, polymorphism, glycoprotein, ionic channel, transport, ion channel, rna editing, lipoprotein
  
• 2wjx.pdb. transport protein 01-jun-09 2wjx
  Title: crystal structure of the human ionotropic glutamate receptor glur2 atd region at 4.1 a resolution
  Author: a. clayton, c. siebold, r. j. c. gilbert, g. c. sutton, k. harlos, r. a. j. mcilhinney, e. y. jones, a. r. aricescu
  Keywords: glutamate receptors, polymorphism, glycoprotein, ionic channel, transport, ion channel, rna editing, lipoprotein
  
• 2wkc.pdb. dna binding protein 09-jun-09 2wkc
  Title: crystal structure from a single-stranded dna binding protein from the lactococcal phage p2
  Author: e. scaltriti, c. cambillau, m. ortiz-lombardia
  Keywords: single-stranded dna binding, ssb, lactococcal phage protein
  
• 2wkd.pdb. dna binding protein 09-jun-09 2wkd Se
  Title: crystal structure of a double ile-to-met mutant of protein orf34 from lactococcus phage p2
  Author: e. scaltriti, c. cambillau, m. ortiz-lombardia
  Keywords: engineered protein, lactococcal phage protein, single-stranded dna binding, dna binding protein
  
• 2wkg.pdb. hydrolase 11-jun-09 2wkg
  Title: nostoc punctiforme debranching enzyme (npde)(native form)
  Author: a. b. dumbrepatil, j. h. choi, h. n. song, k. h. park, e. j. woo
  Keywords: debranching enzyme, neopullulanase, dimerization, cyanobacteria
  
• 2wlv.pdb. virus protein 26-jun-09 2wlv
  Title: structure of the n-terminal capsid domain of hiv-2
  Author: a. j. price, f. marzetta, m. lammers, l. m. j. ylinen, t. schaller, s. j. wilson, g. j. towers, l. c. james
  Keywords: rna-binding, capsid protein, viral nucleoprotein, hiv, aids, hiv-2, hiv-1
  
• 2wlw.pdb. isomerase 26-jun-09 2wlw
  Title: structure of the n-terminal capsid domain of hiv-2
  Author: a. j. price, f. marzetta, m. lammers, l. m. j. ylinen, t. schaller, s. j. wilson, g. j. towers, l. c. james
  Keywords: isomerase, rhesus macaque trim-cyp
  
• 2wng.pdb. cell adhesion 09-jul-09 2wng
  Title: complete extracellular structure of human signal regulatory protein (sirp) alpha
  Author: d. hatherley, s. c. graham, k. harlos, d. i. stuart, a. n. barclay
  Keywords: transmembrane, cell adhesion
  
• 2wqe.pdb. transferase 20-aug-09 2wqe
  Title: structure of s155r aurora-a somatic mutant
  Author: r. bibby, r. bayliss
  Keywords: phosphoprotein, nucleotide-binding, cell cycle, transferase
  
• 2wqk.pdb. hydrolase 23-aug-09 2wqk Na
  Title: crystal structure of sure protein from aquifex aeolicus
  Author: s. v. antonyuk, m. j. ellis, r. w. strange, s. s. hasnain, y. bessho, s. kuramitsu, s. yokoyama, riken structural genomics proteomics initiative (rsgi)
  Keywords: riken structural genomics/proteomics initiative, rsgi, hydrolase
  
• 2wqz.pdb. cell adhesion 28-aug-09 2wqz Ca
  Title: crystal structure of synaptic protein neuroligin-4 in complex with neurexin-beta 1: alternative refinement
  Author: i. p. fabrichny, p. leone, g. sulzenbacher, d. comoletti, m. t. miller, p. taylor, y. bourne, p. marchot
  Keywords: disulfide bond, alternative splicing, alpha/beta-hydrolase cholinesterase autism brain, alternative promoter usage, membrane, polymorphism, glycoprotein, cell adhesion
  
• 2wr0.pdb. viral protein 28-aug-09 2wr0
  Title: structures of influenza h2 hemagglutinins
  Author: j. liu, d. stevens, l. haire, p. coombs, r. russell, s. gamblin, j. skehel
  Keywords: glycoprotein, envelope protein, liproprotein
  
• 2wr1.pdb. viral protein 29-aug-09 2wr1
  Title: structure of influenza h2 hemagglutinin with human receptor
  Author: j. liu, d. j. stevens, l. f. haire, p. a. walker, p. j. coombs, r. j. russell, s. j. gamblin, j. j. skehel
  Keywords: lipoprotein, envelope protein, viral protein
  
• 2wr2.pdb. viral protein 29-aug-09 2wr2
  Title: structure of influenza h2 avian hemagglutinin with avian receptor
  Author: j. liu, d. j. stevens, l. f. haire, p. a. walker, p. j. coombs, r. j. russell, s. j. gamblin, j. j. skehel
  Keywords: glycoprotein, envelope protein, liproprotein
  
• 2wr3.pdb. viral protein 29-aug-09 2wr3
  Title: structure of influenza h2 duck ontario hemagglutinin with avian receptor
  Author: j. liu, d. j. stevens, l. f. haire, p. a. walker, p. j. coombs, r. j. russell, s. j. gamblin, j. j. skehel
  Keywords: lipoprotein, envelope protein, viral protein
  
• 2wr4.pdb. viral protein 29-aug-09 2wr4
  Title: structure of influenza h2 duck ontario hemagglutinin with human receptor
  Author: j. liu, d. j. stevens, l. f. haire, p. a. walker, p. j. coombs, r. j. russell, s. j. gamblin, j. j. skehel
  Keywords: glycoprotein, envelope protein, liproprotein
  
• 2wr5.pdb. viral protein 29-aug-09 2wr5
  Title: structure of influenza h2 duck ontario hemagglutinin
  Author: j. liu, d. j. stevens, l. f. haire, p. a. walker, p. j. coombs, r. j. russell, s. j. gamblin, j. j. skehel
  Keywords: glycoprotein, envelope protein, liproprotein
  
• 2wr7.pdb. viral protein 30-aug-09 2wr7
  Title: the structure of influenza h2 human singapore hemagglutinin with human receptor
  Author: j. liu, d. j. stevens, l. f. haire, p. a. walker, p. j. coombs, r. j. russell, s. j. gamblin, j. j. skehel
  Keywords: glycoprotein, envelope protein, liproprotein
  
• 2wra.pdb. sugar binding protein 01-sep-09 2wra Ca
  Title: bcla lectin from burkholderia cenocepacia complexed with aman1(aman1-6)-3man trisaccharide
  Author: e. lameignere, t. c. shiao, r. roy, m. wimmerova, f. dubreuil, a. varrot, a. imberty
  Keywords: bacterial lectin, oligosaccharides
  
• 2wrb.pdb. viral protein 01-sep-09 2wrb
  Title: the structure of influenza h2 human singapore hemagglutinin with avian receptor
  Author: j. liu, d. j. stevens, l. f. haire, p. a. walker, p. j. coombs, r. j. russell, s. j. gamblin, j. j. skehel
  Keywords: lipoprotein, envelope protein, viral protein
  
• 2wrc.pdb. viral protein 01-sep-09 2wrc
  Title: the structure of influenza h2 human singapore hemagglutinin
  Author: j. liu, d. j. stevens, l. f. haire, p. a. walker, p. j. coombs, r. j. russell, s. j. gamblin, j. j. skehel
  Keywords: lipoprotein, envelope protein, viral protein
  
• 2wrd.pdb. viral protein 01-sep-09 2wrd
  Title: structure of h2 japan hemagglutinin
  Author: j. liu, d. j. stevens, l. f. haire, p. a. walker, p. j. coombs, r. j. russell, s. j. gamblin, j. j. skehel
  Keywords: glycoprotein, envelope protein, lipoprotein
  
• 2wre.pdb. viral protein 01-sep-09 2wre
  Title: structure of h2 japan hemagglutinin with human receptor
  Author: j. liu, d. j. stevens, l. f. haire, p. a. walker, p. j. coombs, r. j. russell, s. j. gamblin, j. j. skehel
  Keywords: glycoprotein, envelope protein, lipoprotein
  
• 2wrf.pdb. viral protein 01-sep-09 2wrf
  Title: structure of h2 avian jena hemagglutinin with human receptor
  Author: j. liu, d. j. stevens, l. f. haire, p. a. walker, p. j. coombs, r. j. russell, s. j. gamblin, j. j. skehel
  Keywords: glycoprotein, lipoprotein, envelope protein
  
• 2wrg.pdb. viral protein 01-sep-09 2wrg
  Title: structure of h1 1918 hemagglutinin with human receptor
  Author: j. liu, d. j. stevens, l. f. haire, p. a. walker, p. j. coombs, r. j. russell, s. j. gamblin, j. j. skehel
  Keywords: envelope protein, glycoprotein, lipoprotein
  
• 2wrh.pdb. viral protein 01-sep-09 2wrh
  Title: structure of h1 duck albert hemagglutinin with human receptor
  Author: j. liu, d. j. stevens, l. f. haire, p. a. walker, p. j. coombs, r. j. russell, s. j. gamblin, j. j. skehel
  Keywords: envelope protein, glycoprotein, lipoprotein
  
• 2wsn.pdb. fluorescent protein 08-sep-09 2wsn
  Title: structure of enhanced cyan fluorescent protein at physiological ph
  Author: m. lelimousin, m. noirclerc-savoye, c. lazareno-saez, b. paetzold, s. le vot, r. chazal, p. macheboeuf, m. j. field, d. bourgeois, a. royant
  Keywords: chromophore, luminescence, photoprotein
  
• 2wso.pdb. fluorescent protein 08-sep-09 2wso
  Title: structure of cerulean fluorescent protein at physiological ph
  Author: m. lelimousin, m. noirclerc-savoye, c. lazareno-saez, b. paetzold, s. le vot, r. chazal, p. macheboeuf, m. j. field, d. bourgeois, a. royant
  Keywords: chromophore, luminescence, photoprotein
  
• 2wtr.pdb. signaling protein 21-sep-09 2wtr Ba
  Title: full length arrestin2
  Author: h. g. zhou, j. standfuss, k. a. watson, c. krasel
  Keywords: sensory transduction, g-protein-coupled receptor desensitization, phosphoprotein
  
• 2yx8.pdb. protein transport 24-apr-07 2yx8 Se
  Title: crystal structure of the extracellular domain of human ramp1
  Author: s. kusano, m. kukimoto-niino, m. shirouzu, t. shindo, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, protein transport
  
• 2zq5.pdb. transferase 06-aug-08 2zq5
  Title: crystal structure of sulfotransferase stf1 from mycobacterium tuberculosis h37rv (type1 form)
  Author: s. tanaka, m. kimura, y. kakuta
  
  
• 2zz8.pdb. unknown function 06-feb-09 2zz8
  Title: crystal structure of lipl32, the most abundant surface protein of pathogenic leptospira spp
  Author: j. p. vivian, t. beddoe, j. rossjohn
  Keywords: outer-membrane protein, unknown function
  
• 3a42.pdb. hydrolase 30-jun-09 3a42
  Title: crystal structure of mvnei1
  Author: k. imamura, s. wallace, s. doublie
  Keywords: zinc-less finger, hydrolase, dna damage, dna repair, dna-binding, glycosidase, lyase, multifunctional enzyme
  
• 3a45.pdb. hydrolase 30-jun-09 3a45 K
  Title: crystal structure of mvnei1_2
  Author: k. imamura, s. wallace, s. doublie
  Keywords: zinc-less finger, hydrolase, dna damage, dna repair, dna-binding, glycosidase, lyase, multifunctional enzyme
  
• 3a46.pdb. hydrolase 01-jul-09 3a46
  Title: crystal structure of mvnei1/thf complex
  Author: k. imamura, s. wallace, s. doublie
  Keywords: zinc-less finger, hydrolase, thf, dna damage, dna repair, dna-binding, glycosidase, lyase, multifunctional enzyme
  
• 3bov.pdb. immune system 17-dec-07 3bov Na
  Title: crystal structure of the receptor binding domain of mouse pd-l2
  Author: e. lazar-molnar, u. ramagopal, e. cao, r. toro, s. g. nathenson, s. c. almo
  Keywords: programmed death-1 ligand2, glycoprotein, immunoglobulin domain, membrane, receptor, transmembrane, immune system
  
• 3bwk.pdb. hydrolase 09-jan-08 3bwk
  Title: crystal structure of falcipain-3 with its inhibitor, k11017
  Author: i. kerr, j. h. lee, l. s. brinen
  Keywords: falcipain, malaria, cysteine protease, hydrolase
  
• 3cay.pdb. de novo protein 20-feb-08 3cay
  Title: crystal structure of lipopeptide detergent (lpd-12)
  Author: d. n. ho, n. c. pomroy, j. a. cuesta-seijo, g. g. prive
  Keywords: acyl chains, detergent, amphiphilic, lipopeptide, self-assembling peptide, de novo protein
  
• 3ctm.pdb. oxidoreductase 14-apr-08 3ctm
  Title: crystal structure of a carbonyl reductase from candida parapsilosis with anti-prelog stereo-specificity
  Author: r. zhang, g. zhu, x. li, y. xu, x. c. zhang, z. rao
  Keywords: candida parapsilosis, short-chain dehydrogenases/reductases (sdr), x-ray crystallography, oxidoreductase
  
• 3cx9.pdb. structural protein 24-apr-08 3cx9
  Title: crystal structure of human serum albumin complexed with myristic acid and lysophosphatidylethanolamine
  Author: s. guo, f. yang, l. chen, c. bian, m. huang
  Keywords: glycoprotein, lipid-binding, metal-binding, polymorphism, secreted, structural protein
  
• 3d4u.pdb. hydrolase/hydrolase inhibitor 15-may-08 3d4u Zn
  Title: bovine thrombin-activatable fibrinolysis inhibitor (tafia) in complex with tick-derived carboxypeptidase inhibitor.
  Author: l. sanglas, z. valnickova, j. l. arolas, i. pallares, t. guevara, m. sola, t. kristensen, j. j. enghild, f. x. aviles, f. x. gomis-ruth
  Keywords: hydrolase/hydrolase inhibitor complex
  
• 3dey.pdb. oxidoreductase 10-jun-08 3dey
  Title: crystal structure of 17beta-hsd1 with dht in normal and reverse orientation.
  Author: m. mazumdar
  Keywords: dht, cytoplasm, lipid synthesis, nadp, oxidoreductase, polymorphism, steroid biosynthesis
  
• 3dgv.pdb. hydrolase 16-jun-08 3dgv Zn
  Title: crystal structure of thrombin activatable fibrinolysis inhibitor (tafi)
  Author: k. anand, i. pallares, z. valnickova, t. christensen, h. schreuder, j. enghild
  Keywords: fibrinolysis, carboxypeptidase, protein stability, glycoprotein, hydrolase, metal-binding, metalloprotease, protease, secreted, zinc, zymogen
  
• 3dvw.pdb. oxidoreductase 21-jul-08 3dvw
  Title: crystal structure of reduced dsba1 from neisseria meningitidis
  Author: c. lafaye, l. serre
  Keywords: neisseria, dsba, disulfide bond
  
• 3dvx.pdb. oxidoreductase 21-jul-08 3dvx Se
  Title: crystal structure of reduced dsba3 from neisseria meningitidis
  Author: c. lafaye, l. serre
  Keywords: neisseria, dsba, disulfide bond
  
• 3eka.pdb. lyase 19-sep-08 3eka
  Title: crystal structure of the complex of hyaluranidase trimer with ascorbic acid at 3.1 a resolution reveals the locations of three binding sites
  Author: p. mishra, a. s. ethayathulla, r. prem kumar, n. singh, s. sharma, p. kaur, v. bhakuni, t. p. singh
  Keywords: lyase, hyaluronan lyase, phage tail fibre, triple-stranded
  
• 3el3.pdb. oxidoreductase 19-sep-08 3el3 Fe
  Title: distinct monooxygenase and farnesene synthase active sites in cytochrome p450 170a1
  Author: b. zhao, m. r. waterman
  Keywords: cytochrome p450 oxidoreductase, cyp170a1, antibiotic biosynthesis, farnesene synthase, heme, iron, metal-binding, monooxygenase
  
• 3em5.pdb. hydrolase, allergen 23-sep-08 3em5
  Title: crystal structure of a native endo beta-1,3-glucanase (hev b 2), a major allergen from hevea brasiliensis
  Author: d. fuentes-silva, a. rodriguez-romero
  Keywords: rossmann fold, (beta-alpha)8-tim-barrel, glycosidase, hydrolase, allergen
  
• 3emc.pdb. hydrolase 24-sep-08 3emc
  Title: crystal structure of xynb, an intracellular xylanase from paenibacillus barcinonensis
  Author: sanz-aparicio, j, p. isorna, b. gonzalez
  Keywords: glycosidase, hydrolase, xylan degradation
  
• 3emq.pdb. hydrolase 25-sep-08 3emq
  Title: crystal structure of xilanase xynb from paenibacillus barcelonensis complexed with an inhibitor
  Author: j. sanz-aparicio, p. isorna
  Keywords: hydrolase
  
• 3emr.pdb. oxidoreductase 25-sep-08 3emr Fe Se
  Title: crystal structure analysis of the ectoine hydroxylase ectd from salibacillus salexigens
  Author: k. reuter, a. heine
  Keywords: oxidoreductase
  
• 3emz.pdb. hydrolase 25-sep-08 3emz
  Title: crystal structure of xylanase xynb from paenibacillus barcinonensis complexed with a conduramine derivative
  Author: j. sanz-aparicio, p. isorna
  Keywords: gh10 enzyme complex, hydrolase
  
• 3enq.pdb. isomerase 25-sep-08 3enq
  Title: substrate and inhibitor complexes of ribose 5-phosphate isomerase a from vibrio vulnificus yj016
  Author: k. min, t. h. kwon, t. g. kim
  Keywords: arabinose 5-phosphate, isomerase
  
• 3env.pdb. isomerase 26-sep-08 3env
  Title: substrate and inhibitor complexes of ribose 5-phosphate isomerase from vibrio vulnificus yj016
  Author: k. min, t. h. kwon, t. g. kim
  Keywords: arabinose 5-phosphate, isomerase
  
• 3enw.pdb. isomerase 26-sep-08 3enw
  Title: substrate and inhibitor complexes of ribose 5-phosphate isomerase from vibrio vulnificus yj016
  Author: k. min, t. h. kwon, t. g. kim
  Keywords: arabinose 5-phosphate, isomerase
  
• 3eop.pdb. 29-sep-08 3eop
  Title: crystal structure of the duf55 domain of human thymocyte nuclear protein 1
  Author: f. yu, a. song, c. xu, l. sun, l. li, l. tang, h. hu, j. he
  Keywords: alternative splicing, nucleus, phosphoprotein
  
• 3ep1.pdb. immune system 29-sep-08 3ep1
  Title: structure of the pgrp-hd from alvinella pompejana
  Author: v. delfosse, n. gagniere, e. perrodou, o. poch, o. lecompte, c. mayer
  Keywords: alvinella pompejana, immune system, thermophile, model system
  
• 3epu.pdb. chaperone 30-sep-08 3epu
  Title: crystal structure of stm2138, a novel virulence chaperone in salmonella
  Author: k. zhang, s. n. andres, m. hannemann, b. coombes, m. junop
  Keywords: salmonella, typeiii secretion system, stm2138, srca (ssrb-regulated chaperone a)
  
• 3etc.pdb. ligase 07-oct-08 3etc Mg
  Title: 2.1 a structure of acyl-adenylate synthetase from methanosarcina acetivorans containing a link between lys256 and cys298
  Author: m. b. shah, a. m. gulick, k. s. smith, c. ingram-smith
  
  
• 3f41.pdb. hydrolase 31-oct-08 3f41
  Title: structure of the tandemly repeated protein tyrosine phosphatase like phytase from mitsuokella multacida
  Author: r. j. gruninger, l. b. selinger, s. c. mosimann
  Keywords: tandem repeat, protein tyrosine phosphatase, inositol phosphatase, hydrolase
  
• 3f75.pdb. hydrolase 07-nov-08 3f75 Cl Br
  Title: activated toxoplasma gondii cathepsin l (tgcpl) in complex with its propeptide
  Author: e. t. larson, e. a. merritt, medical structural genomics of pathogenic protozoa (msgpp)
  Keywords: msgpp, cysteine protease, parasite, protozoa, hydrolase, thiol protease
  
• 3f9e.pdb. hydrolase 13-nov-08 3f9e
  Title: crystal structure of the s139a mutant of sars-coronovirus 3c-like protease
  Author: t. hu, l. li, h. jiang, x. shen
  Keywords: cytoplasm, hydrolase, membrane, metal-binding, ribosomal frameshifting, rna-binding, thiol protease, transmembrane, zinc, zinc-finger
  
• 3f9f.pdb. hydrolase 13-nov-08 3f9f
  Title: crystal structure of the f140a mutant of sars-coronovirus 3c-like protease at ph 6.0
  Author: t. hu, l. li, h. jiang, x. shen
  Keywords: cytoplasm, hydrolase, membrane, metal-binding, ribosomal frameshifting, rna-binding, thiol protease, transmembrane, zinc, zinc-finger
  
• 3f9g.pdb. hydrolase 13-nov-08 3f9g
  Title: crystal structure of the f140a mutant of sars-coronovirus 3c-like protease at ph 6.5
  Author: t. hu, l. li, h. jiang, x. shen
  Keywords: cytoplasm, hydrolase, membrane, metal-binding, ribosomal frameshifting, rna-binding, thiol protease, transmembrane, zinc, zinc-finger
  
• 3f9h.pdb. hydrolase 13-nov-08 3f9h
  Title: crystal structure of the f140a mutant of sars-coronovirus 3c-like protease at ph 7.6
  Author: t. hu, l. li, h. jiang, x. shen
  Keywords: cytoplasm, hydrolase, membrane, metal-binding, ribosomal frameshifting, rna-binding, thiol protease, transmembrane, zinc, zinc-finger
  
• 3f9o.pdb. hydrolase 14-nov-08 3f9o Cl Zn
  Title: crystal structure of the di-zinc carbapenemase cpha from aeromonas hydrophila
  Author: h. delbruck, k. m. v. hoffmann
  Keywords: antibiotic resistance, metal-binding, periplasm, zinc
  
• 3f9p.pdb. oxidoreductase 14-nov-08 3f9p Cl Fe Ca
  Title: crystal structure of myeloperoxidase from human leukocytes
  Author: x. carpena, i. fita, c. obinger
  Keywords: oxidation, oxidoreductase, polymorphism, disulfide bond, heme, peroxidase
  
• 3fai.pdb. hydrolase 17-nov-08 3fai Cl Zn
  Title: the di zinc carbapenemase cpha n220g mutant
  Author: h. delbruck, k. m. v. hoffmann
  Keywords: antibiotic resistance, metal-binding, periplasm, zinc
  
• 3fb4.pdb. transferase 18-nov-08 3fb4 Zn
  Title: crystal structure of adenylate kinase from marinibacillus marinus
  Author: m. g. davlieva, y. shamoo
  Keywords: kinase, adenylate kinase, phosphotransferase, atp-binding, nucleotide-binding, transferase
  
• 3fgz.pdb. signaling protein 08-dec-08 3fgz F Be Mn
  Title: crystal structure of chey triple mutant f14e, n59m, e89r complexed with bef3- and mn2+
  Author: a. c. wollish, p. j. miller, y. pazy, e. j. collins, r. b. bourret
  Keywords: receiver domain, bef3, two-component signal transduction, chemotaxis, cytoplasm, flagellar rotation, magnesium, metal-binding, phosphoprotein, two- component regulatory system, signaling protein
  
• 3fkb.pdb. transferase 16-dec-08 3fkb Mg
  Title: structure of ndpk h122g and tenofovir-diphosphate
  Author: s. morera, y. x. chen
  Keywords: atp-binding, cytoplasm, kinase, magnesium, metal-binding, nucleotide metabolism, nucleotide-binding, phosphoprotein, transferase
  
• 3fs3.pdb. chaperone 09-jan-09 3fs3
  Title: crystal structure of malaria parasite nucleosome assembly protein (nap)
  Author: j. gill, m. yogavel, a. kumar, h. belrhali, a. sharma
  Keywords: nucleosome assembly protein, protein localization, histone recognition, structural analysis, chaperone
  
• 3fsn.pdb. isomerase 11-jan-09 3fsn Fe
  Title: crystal structure of rpe65 at 2.14 angstrom resolution
  Author: p. d. kiser, d. t. lodowski, k palczewski
  Keywords: palmitoylation, cell membrane, cytoplasm, lipoprotein, membrane, palmitate, sensory transduction, vision, isomerase, isomerohydrolase
  
• 3g20.pdb. protein transport 30-jan-09 3g20 Na Ca
  Title: crystal structure of the major pseudopilin from the type 2 secretion system of enterohaemorrhagic escherichia coli
  Author: k. v. korotkov, m. d. gray, a. kreger, s. turley, m. sandkvist, w. g. j. hol
  Keywords: major pilin, protein transport, complex
  
• 3gcq.pdb. transferase 22-feb-09 3gcq
  Title: human p38 map kinase in complex with rl45
  Author: c. gruetter, j. r. simard, m. getlik, d. rauh
  Keywords: type ii, alternative splicing, atp-binding, cytoplasm, kinase, nucleotide-binding, nucleus, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
  
• 3gcs.pdb. transferase 22-feb-09 3gcs Cl F
  Title: human p38 map kinase in complex with sorafenib
  Author: c. gruetter, j. r. simard, d. rauh
  Keywords: type ii, bay439006, alternative splicing, atp- binding, cytoplasm, kinase, nucleotide-binding, nucleus, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
  
• 3gcu.pdb. transferase 22-feb-09 3gcu
  Title: human p38 map kinase in complex with rl48
  Author: c. gruetter, j. r. simard, m. getlik, d. rauh
  Keywords: type ii, alternative splicing, atp-binding, cytoplasm, kinase, nucleotide-binding, nucleus, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
  
• 3gi2.pdb. oxidoreductase 05-mar-09 3gi2
  Title: human dihydrofolate reductase q35k mutant inhibitor complex
  Author: v. cody
  Keywords: folate enzyme, active site mutants, nadp, one-carbon metabolism, oxidoreductase
  
• 3gn8.pdb. hormone/hormone activator 16-mar-09 3gn8 F
  Title: x-ray crystal structure of ancgr2 in complex with dexamethasone
  Author: e. a. ortlund
  Keywords: gr2, evolution, glucocorticoid receptor, dexamethasone, cortisol, activator, nucleus, phosphoprotein, polymorphism, transcription, transcription regulation, hormone/hormone activator complex
  
• 3gn9.pdb. protein transport 16-mar-09 3gn9 Ca
  Title: crystal structure of the major pseudopilin from the type 2 secretion system of vibrio vulnificus
  Author: k. v. korotkov, m. d. gray, a. kreger, s. turley, m. sandkvist, w. g. j. hol
  Keywords: major pilin, protein transport, complex, methylation
  
• 3h3f.pdb. oxidoreductase 16-apr-09 3h3f
  Title: rabbit muscle l-lactate dehydrogenase in complex with nadh and oxamate
  Author: a. bujacz, g. bujacz, k. swiderek, p. paneth
  Keywords: rossman fold, oxidoreductase, glycolysis, nad, nadh, oxamate, m-type tetramer
  
• 3h5f.pdb. de novo protein 22-apr-09 3h5f Cl Zn
  Title: switching the chirality of the metal environment alters the coordination mode in designed peptides.
  Author: a. f. a. peacock, j. a. stuckey, v. l. pecoraro
  Keywords: parallel three-stranded coiled coil, l- penicillamine, de novo protein
  
• 3h5g.pdb. de novo protein 22-apr-09 3h5g Zn
  Title: switching the chirality of the metal environment alters the coordination mode in designed peptides.
  Author: a. f. a. peacock, j. a. stuckey, v. l. pecoraro
  Keywords: parallel three-stranded coiled coil, d- penicillamine, de novo protein
  
• 3h5s.pdb. transferase 22-apr-09 3h5s F
  Title: hepatitis c virus polymerase ns5b with saccharin inhibitor
  Author: s. f. harris, a. wong
  Keywords: secreted, serine protease, sh3-binding, thiol protease, transcription, transcription regulation, transferase, transmembrane, ubl conjugation, viral nucleoprotein, virion, zinc
  
• 3h5u.pdb. transferase 22-apr-09 3h5u F
  Title: hepatitis c virus polymerase ns5b with saccharin inhibitor 1
  Author: s. f. harris, m. ghate
  Keywords: secreted, serine protease, sh3-binding, thiol protease, transcription, transcription regulation, transferase, transmembrane, ubl conjugation, viral nucleoprotein, virion, zinc
  
• 3h60.pdb. hydrolase 23-apr-09 3h60 Mn
  Title: catalytic domain of human serine/threonine phosphatase 5 (pp5c)with two mn2+ atoms
  Author: i. bertini, v. calderone, m. fragai, c. luchinat, e. talluri
  Keywords: phosphatase, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus, protein phosphatase, tpr repeat
  
• 3h61.pdb. hydrolase 23-apr-09 3h61 Mn
  Title: catalytic domain of human serine/threonine phosphatase 5 (pp5c) with two mn2+ atoms originally soaked with norcantharidin (which is present in the structure in the hydrolyzed form)
  Author: i. bertini, v. calderone, m. fragai, c. luchinat, e. talluri
  Keywords: phosphatase, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus, protein phosphatase, tpr repeat
  
• 3h62.pdb. hydrolase 23-apr-09 3h62 Mn
  Title: catalytic domain of human serine/threonine phosphatase 5 (pp5c) with two mn2+ atoms complexed with cantharidic acid
  Author: i. bertini, v. calderone, m. fragai, c. luchinat, e. talluri
  Keywords: phosphatase, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus, protein phosphatase, tpr repeat
  
• 3h63.pdb. hydrolase 23-apr-09 3h63 Mn
  Title: catalytic domain of human serine/threonine phosphatase 5 (pp5c) with two mn2+ atoms originally soaked with cantharidin (which is present in the structure in the hydrolyzed form)
  Author: i. bertini, v. calderone, m. fragai, c. luchinat, e. talluri
  Keywords: phosphatase, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus, protein phosphatase, tpr repeat
  
• 3h64.pdb. hydrolase 23-apr-09 3h64 Mn
  Title: catalytic domain of human serine/threonine phosphatase 5 (pp5c) with two mn2+ atoms complexed with endothall
  Author: i. bertini, v. calderone, m. fragai, c. luchinat, e. talluri
  Keywords: phosphatase, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus, protein phosphatase, tpr repeat
  
• 3h66.pdb. hydrolase 23-apr-09 3h66 Zn
  Title: catalytic domain of human serine/threonine phosphatase 5 (pp5c) with two zn2+ atoms
  Author: i. bertini, v. calderone, m. fragai, c. luchinat, e. talluri
  Keywords: phosphatase, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus, protein phosphatase, tpr repeat
  
• 3h67.pdb. hydrolase 23-apr-09 3h67 Zn
  Title: catalytic domain of human serine/threonine phosphatase 5 (pp5c)with two zn2+ atoms complexed with cantharidic acid
  Author: i. bertini, v. calderone, m. fragai, c. luchinat, e. talluri
  Keywords: phosphatase, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus, protein phosphatase, tpr repeat
  
• 3h68.pdb. hydrolase 23-apr-09 3h68 Zn
  Title: catalytic domain of human serine/threonine phosphatase 5 (pp5c)with two zn2+ atoms originally soaked with cantharidin (which is present in the structure in the hydrolyzed form)
  Author: i. bertini, v. calderone, m. fragai, c. luchinat, e. talluri
  Keywords: phosphatase, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus, protein phosphatase, tpr repeat
  
• 3h69.pdb. hydrolase 23-apr-09 3h69 Zn
  Title: catalytic domain of human serine/threonine phosphatase 5 (pp5c) with two zn2+ atoms complexed with endothall
  Author: i. bertini, v. calderone, m. fragai, c. luchinat, e. talluri
  Keywords: phosphatase, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus, protein phosphatase, tpr repeat
  
• 3h8d.pdb. motor protein/signaling protein 29-apr-09 3h8d Cl
  Title: crystal structure of myosin vi in complex with dab2 peptide
  Author: c. yu, w. feng, z. wei, m. zhang
  Keywords: motor protein/signaling protein complex
  
• 3h9u.pdb. hydrolase 30-apr-09 3h9u
  Title: s-adenosyl homocysteine hydrolase (sahh) from trypanosoma brucei
  Author: m. i. siponen, p. schutz, c. h. arrowsmith, h. berglund, c. bountra, r. collins, a. m. edwards, s. flodin, a. flores, s. graslund, m. hammarstrom, a. johansson, i. johansson, t. karlberg, t. kragh nielsen, t. kotenyova, a. kotzsch, m. moche, p. nordlund, t. nyman, c. persson, j. sagemark, a. g. thorsell, l. tresaugues, s. van den berg, j. weigelt, m. welin, m. wisniewska, h. schueler, structural genomics consortium (sgc)
  Keywords: structural genomics, sgc stockholm, structural genomics consortium, sgc, hydrolase, nad, one- carbon metabolism
  
• 3hb2.pdb. hydrolase 04-may-09 3hb2 Cl Zn Ca
  Title: prtc methionine mutants: m226i
  Author: a. e. oberholzer, m. bumann, t. hege, s. russo, u. baumann
  Keywords: beta roll, zinc, calcium, hydrolase, metal-binding, metalloprotease, protease, secreted, zymogen
  
• 3hbu.pdb. hydrolase 05-may-09 3hbu Cl Zn Ca
  Title: prtc methionine mutants: m226h desy
  Author: a. e. oberholzer, m. bumann, t. hege, s. russo, u. baumann
  Keywords: beta roll, zinc, metalloprotease, metzincin, calcium, hydrolase, metal-binding, protease, secreted, zymogen
  
• 3hbv.pdb. hydrolase 05-may-09 3hbv Cl Zn Ca
  Title: prtc methionine mutants: m226a in-house
  Author: a. e. oberholzer, m. bumann, t. hege, s. russo, u. baumann
  Keywords: beta roll, zinc, metalloprotease, metzincin, calcium, hydrolase, metal-binding, protease, secreted, zymogen
  
• 3hda.pdb. hydrolase 07-may-09 3hda Cl Ca
  Title: prtc methionine mutants: m226a_desy
  Author: a. e. oberholzer, m. bumann, t. hege, s. russo, u. baumann
  Keywords: beta roll, zinc, metalloprotease, metzincin, calcium, hydrolase, metal-binding, protease, secreted, zymogen
  
• 3hds.pdb. isomerase 07-may-09 3hds
  Title: crystal structure of 4-methylmuconolactone methylisomerase in complex with mes
  Author: m. marin, d. w. heinz, d. h. pieper, b. u. klink
  Keywords: ferredoxin-like fold, beta-barrel, isomerase, 4- methylmuconolactone methylisomerase, biodegradation, ortho- cleavage
  
• 3hek.pdb. chaperone 08-may-09 3hek Cl F
  Title: hsp90 n-terminal domain in complex with 1-{4-[(2r)-1-(5- chloro-2,4-dihydroxybenzoyl)pyrrolidin-2-yl]benzyl}-3,3- difluoropyrrolidinium
  Author: k. s. gajiwala
  Keywords: alternative splicing, atp-binding, chaperone, cytoplasm, nucleotide-binding, phosphoprotein, stress response
  
• 3hf5.pdb. isomerase 11-may-09 3hf5
  Title: crystal structure of 4-methylmuconolactone methylisomerase in complex with 3-methylmuconolactone
  Author: m. marin, d. w. heinz, d. h. pieper, b. u. klink
  Keywords: ferredoxin-like fold, beta-barrel, isomerase, 4- methylmuconolactone methylisomerase, biodegradation, ortho- cleavage
  
• 3hfg.pdb. oxidoreductase 11-may-09 3hfg F
  Title: crystal structure of human 11-beta-hydroxysteroid- dehydrogenase bound to an sulfonyl-piperazine inhibitor
  Author: j. bard, k. svenson
  Keywords: hsd1, nadp, inhibitor, endoplasmic reticulum, glycoprotein, lipid metabolism, membrane, polymorphism, signal-anchor, steroid metabolism, transmembrane
  
• 3hfk.pdb. isomerase 12-may-09 3hfk
  Title: crystal structure of 4-methylmuconolactone methylisomerase (h52a) in complex with 4-methylmuconolactone
  Author: m. marin, d. w. heinz, d. h. pieper, b. u. klink
  Keywords: ferredoxin-like fold, beta-barrel, isomerase, 4- methylmuconolactone methylisomerase, h52a, biodegradation, ortho-cleavage
  
• 3hhm.pdb. transferase/oncoprotein 15-may-09 3hhm
  Title: crystal structure of p110alpha h1047r mutant in complex with nish2 of p85alpha and the drug wortmannin
  Author: l. m. amzel, b. vogelstein, s. b. gabelli, d. mandelker
  Keywords: transferase/oncoprotein complex
  
• 3hhs.pdb. oxidoreductase 17-may-09 3hhs Cu
  Title: crystal structure of manduca sexta prophenoloxidase
  Author: y. li, y. wang, h. jiang, j. deng
  Keywords: beta strand, copper, melanin biosynthesis, metal-binding, monooxygenase, oxidoreductase, secreted
  
• 3hi8.pdb. replication 19-may-09 3hi8
  Title: crystal structure of proliferating cell nuclear antigen (pcna) from haloferax volcanii
  Author: e. morgunova, f. c. gray, macneill s. a. , r. ladenstein
  Keywords: replication, dna interaction, haloferax volcanii
  
• 3hiz.pdb. transferase/oncoprotein 20-may-09 3hiz
  Title: crystal structure of p110alpha h1047r mutant in complex with nish2 of p85alpha
  Author: l. m. amzel, b. vogelstein, s. b. gabelli, d. mandelker
  Keywords: host-virus interaction, phosphoprotein, sh2 domain, sh3 domain, ubl conjugation, transferase/oncoprotein complex
  
• 3hji.pdb. signaling protein 21-may-09 3hji
  Title: 1.8 angstrom crystal structure of the i74v:i85v variant of vivid (vvd).
  Author: b. d. zoltowski, b. j. vaccaro, b. r. crane
  Keywords: circadian clock, lov, fad, signaling protein
  
• 3hjk.pdb. signaling protein 21-may-09 3hjk
  Title: 2.0 angstrom structure of the ile74val variant of vivid (vvd).
  Author: b. d. zoltowski, b. j. vaccaro, b. r. crane
  Keywords: circadian clock, fad, lov, pas, signaling protein
  
• 3hk5.pdb. isomerase 22-may-09 3hk5 Cl Zn
  Title: crystal structure of uronate isomerase from bacillus halodurans complexed with zinc and d-arabinarate
  Author: a. a. fedorov, e. v. fedorov, t. t. nguyen, f. m. raushel, s. c. almo
  Keywords: mechanism of the reaction, d-arabinarate
  
• 3hk7.pdb. isomerase 22-may-09 3hk7 Cl Zn Na
  Title: crystal structure of uronate isomerase from bacillus halodurans complexed with zinc and d-arabinarate, monoclinic crystal form
  Author: a. a. fedorov, e. v. fedorov, t. t. nguyen, f. m. raushel, s. c. almo
  Keywords: mechanism of the reaction, d-arabinarate
  
• 3hk8.pdb. isomerase 22-may-09 3hk8 Cl Zn
  Title: crystal structure of uronate isomerase from bacillus halodurans complexed with zinc and d-arabinohydroxamate
  Author: a. a. fedorov, e. v. fedorov, t. t. nguyen, f. m. raushel, s. c. almo
  Keywords: d-arabinohydroxamate, mechanism of the reaction
  
• 3hk9.pdb. isomerase 22-may-09 3hk9 Cl Zn
  Title: crystal structure of uronate isomerase from bacillus halodurans complexed with zinc and d-glucuronate
  Author: a. a. fedorov, e. v. fedorov, t. t. nguyen, f. m. raushel, s. c. almo
  Keywords: d-glucuronate, mechanism of the reaction
  
• 3hka.pdb. isomerase 22-may-09 3hka Cl Zn
  Title: crystal structure of uronate isomerase from bacillus halodurans complexed with zinc and d-fructuronate
  Author: a. a. fedorov, e. v. fedorov, t. t. nguyen, f. m. raushel, s. c. almo
  Keywords: d-fructuronate, mechanism of the reaction
  
• 3hks.pdb. translation, rna binding protein 25-may-09 3hks
  Title: crystal structure of eukaryotic translation initiation factor eif-5a2 from arabidopsis thaliana
  Author: y. b. teng, y. x. he, y. l. jiang, y. x. chen, c. z. zhou
  Keywords: alternative splicing, hypusine, initiation factor, protein biosynthesis, translation, rna binding protein
  
• 3hoa.pdb. hydrolase 01-jun-09 3hoa
  Title: crystal structure of the thermus thermophilus m32 carboxypeptidase
  Author: m. m. lee, m. k. chan
  Keywords: carboxypeptidase, hydrolase
  
• 3hp2.pdb. transferase 03-jun-09 3hp2 F Br
  Title: crystal structure of human p38alpha complexed with a pyridinone compound
  Author: h. -s. shieh, j. m. williams, r. a. stegeman, r. g. kurumbail
  Keywords: serine/threonine-protein kinase, transferase
  
• 3hp5.pdb. transferase 03-jun-09 3hp5 Cl F
  Title: crystal structure of human p38alpha complexed with a pyrimidopyridazinone compound
  Author: h. -s. shieh, j. m. williams, r. a. stegeman, r. g. kurumbail
  Keywords: serine/threonine-protein kinase, transferase
  
• 3hrh.pdb. hydrolase 09-jun-09 3hrh
  Title: crystal structure of antigen 85c and glycerol
  Author: j. boucau, a. k sanki, f. e. umesiri, s. j. sucheck, d. r. ronning
  Keywords: acyltransferase, secreted
  
• 3htx.pdb. transferase/rna 12-jun-09 3htx Mg
  Title: crystal structure of small rna methyltransferase hen1
  Author: y. huang, l. -j. ji, q. -c. huang, d. g. vassylyev, x. -m. chen, j. -b. ma
  Keywords: small rna methyltransferase, protein-rna complex, sam binding protein, transferase/rna complex
  
• 3huw.pdb. ribosome 15-jun-09 3huw Mg Zn
  Title: structure of ef-p bound to the 70s ribosome; this file contains the 30s subunit, mrna, p-site trna and ef-p for molecule i.
  Author: r. e. stanley, g. blaha
  Keywords: elongation factor, initiation, l1-stalk, ribosome
  
• 3hux.pdb. ribosome 15-jun-09 3hux Mg Zn
  Title: structure of ef-p bound to the 70s ribosome; this file contains the 50s subunit for molecule i.
  Author: r. e. stanley, g. blaha
  Keywords: elongation factor, initiation, l1-stalk, repressor, ribonucleoprotein, ribosomal protein, rna- binding, rrna-binding, translation regulation, trna- binding, methylation, metal-binding, zinc, ribosome
  
• 3huy.pdb. ribosome 15-jun-09 3huy Mg Zn
  Title: structure of ef-p bound to the 70s ribosome; this file contains the 30s subunit, mrna, p-site trna and ef-p for molecule ii.
  Author: r. e. stanley, g. blaha
  Keywords: ribosome
  
• 3huz.pdb. ribosome 15-jun-09 3huz Mg Zn
  Title: structure of ef-p bound to the 70s ribosome; this file contains the 50s subunit for molecule ii.
  Author: r. e. stanley, g. blaha
  Keywords: elongation factor, initiation, l1-stalk, repressor, ribonucleoprotein, ribosomal protein, rna- binding, rrna-binding, translation regulation, trna- binding, methylation, metal-binding, zinc, ribosome
  
• 3hz8.pdb. oxidoreductase 23-jun-09 3hz8
  Title: crystal structure of the oxidized t176v dsba1 mutant
  Author: c. lafaye, t. iwema, p. carpentier, c. jullian-binard, l. serre
  Keywords: neisseria, dsba, disulfide bond
  
• 3i0w.pdb. hydrolase,lyase/dna 25-jun-09 3i0w Na
  Title: crystal structure of clostridium acetobutylicum 8-oxoguanine glycosylase/lyase in complex with dsdna containing cytosine opposite to 8-oxog
  Author: f. faucher, s. doublie
  Keywords: cacogg, dna, 8-oxog, 8oxog, glycosylase, cytosine, hydrolase,lyase/dna complex
  
• 3i0x.pdb. hydrolase,lyase/dna 25-jun-09 3i0x Na
  Title: crystal structure of clostridium acetobutylicum 8-oxoguanine glycosylase/lyase in complex with dsdna containing adenine opposite to 8-oxog
  Author: f. faucher, s. doublie
  Keywords: cacogg, dna, 8-oxog, 8oxog, glycosylase,adenine, hydrolase,lyase/dna complex
  
• 3i3k.pdb. oxidoreductase 30-jun-09 3i3k Cl Fe
  Title: crystal structure of human lanosterol 14alpha-demethylase (cyp51) in complex with ketoconazole
  Author: n. v. strushkevich, w. tempel, f. mackenzie, c. h. arrowsmith, a. m. edwards, c. bountra, j. u. weigelt, h. park
  Keywords: steroid biosynthesis, sterol biosynthesis, transmembrane
  
• 3i5x.pdb. hydrolase/rna 06-jul-09 3i5x Mg
  Title: structure of mss116p bound to ssrna and amp-pnp
  Author: m. del campo, a. m. lambowitz
  Keywords: rna helicase, dead-box, atp-binding, helicase, hydrolase, mitochondrion, mrna processing, mrna splicing, nucleotide-binding, rna-binding, transit peptide, translation regulation, hydrolase/rna comple...
  
• 3i5y.pdb. hydrolase/rna 06-jul-09 3i5y Mg Br
  Title: structure of mss116p bound to ssrna containing a single 5- bru and amp-pnp
  Author: m. del campo, a. m. lambowitz
  Keywords: rna helicase, dead-box, atp-binding, helicase, hydrolase, mitochondrion, mrna processing, mrna splicing, nucleotide-binding, rna-binding, transit peptide, translation regulation, hydrolase/rna comple...
  
• 3i61.pdb. hydrolase/rna 06-jul-09 3i61 Mg F Be
  Title: structure of mss116p bound to ssrna and adp-beryllium fluoride
  Author: m. del campo, a. m. lambowitz
  Keywords: rna helicase, dead-box, atp-binding, helicase, hydrolase, mitochondrion, mrna processing, mrna splicing, nucleotide-binding, rna-binding, transit peptide, translation regulation, hydrolase/rna comple...
  
• 3i62.pdb. hydrolase/rna 06-jul-09 3i62 Mg F Al
  Title: structure of mss116p bound to ssrna and adp-aluminum fluoride
  Author: m. del campo, a. m. lambowitz
  Keywords: rna helicase, dead-box, atp-binding, helicase, hydrolase, mitochondrion, mrna processing, mrna splicing, nucleotide-binding, rna-binding, transit peptide, translation regulation, hydrolase/rna comple...
  
• 3i6o.pdb. hydrolase 07-jul-09 3i6o I Na
  Title: crystal structure of wild type hiv-1 protease with macrocyclic inhibitor grl-0216a
  Author: a. a. chumanevich, y. -f. wang, a. y. kovalevsky, i. t. weber
  Keywords: wild type protease, protease inhibitor, macrocyclic ligand, aids, aspartyl protease, hydrolase
  
• 3i7e.pdb. hydrolase 08-jul-09 3i7e
  Title: co-crystal structure of hiv-1 protease bound to a mutant resistant inhibitor uic-98038
  Author: l. hong, j. tang, a. ghosh
  Keywords: hiv, hiv prtease, hiv-protease inhibitor, drug design, aspartic protease, acid protease, structure based drug design, aspartyl protease, hydrolase, protease
  
• 3i9g.pdb. immune system 10-jul-09 3i9g Mg Ca
  Title: crystal structure of the lt1009 (sonepcizumab) antibody fab fragment in complex with sphingosine-1-phosphate
  Author: t. huxford
  Keywords: fab, sphingosine-1-phosphate, calcium, immunoglobin, igg, immune system
  
• 3ia4.pdb. oxidoreductase 13-jul-09 3ia4
  Title: moritella profunda dihydrofolate reductase (dhfr) in complex with nadph and methotrexate (mtx)
  Author: c. levy
  Keywords: nadph, methotrexate, oxidoreductase
  
• 3ia5.pdb. oxidoreductase 13-jul-09 3ia5
  Title: moritella profunda dihydrofolate reductase (dhfr)
  Author: s. hay, r. m. evans, c. levy, x. wang, e. j. loveridge, d. leys, r. k. allemann, n. s. scrutton
  Keywords: oxidoreductase
  
• 3ib7.pdb. hydrolase 15-jul-09 3ib7 Mn Fe
  Title: crystal structure of full length rv0805
  Author: m. podobnik, u. dermol
  Keywords: alpha-beta fold, swapped-dimer, hydrolase
  
• 3ib8.pdb. hydrolase 15-jul-09 3ib8 Mn Fe
  Title: crystal structure of full length rv0805 in complex with 5'- amp
  Author: m. podobnik, u. dermol
  Keywords: alpha-beta fold, swapped-dimer, hydrolase
  
• 3icu.pdb. ligase 18-jul-09 3icu
  Title: protease-associated domain of the e3 ligase grail
  Author: j. r. walker, l. yermekbayeva, a. seitova, j. weigelt, c. bountra, c. h. arrowsmith, a. m. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
  Keywords: metal- binding, zinc, zinc-finger
  
• 3idb.pdb. transferase 20-jul-09 3idb Mn
  Title: crystal structure of (108-268)riib:c holoenzyme of camp- dependent protein kinase
  Author: s. h. j. brown, j. wu, c. kim, k. alberto, s. s. taylor
  Keywords: serine/threonine-protein kinase, transferase, acetylation, camp-binding
  
• 3idc.pdb. transferase 20-jul-09 3idc Mn
  Title: crystal structure of (102-265)riib:c holoenzyme of camp- dependent protein kinase
  Author: s. h. j. brown, j. wu, c. kim, k. alberto, s. s. taylor
  Keywords: serine/threonine-protein kinase, transferase, acetylation, camp-binding
  
• 3ihg.pdb. flavoprotein, oxidoreductase 30-jul-09 3ihg
  Title: crystal structure of a ternary complex of aklavinone-11 hydroxylase with fad and aklavinone
  Author: y. lindqvist, h. koskiniemi, a. jansson, t. sandalova, g. schneider
  Keywords: anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein, oxidoreductase
  
• 3ije.pdb. protein binding 04-aug-09 3ije Ca
  Title: crystal structure of the complete integrin alhavbeta3 ectodomain plus an alpha/beta transmembrane fragment
  Author: j-. p. xiong, b. mahalingham, x. rui, b. t. hyman, s. l. goodman, m. a. arnaout
  Keywords: membrane, polymorphism, receptor, transmembrane, disease mutation, phosphoprotein, protein binding
  
• 3iku.pdb. structural protein 06-aug-09 3iku (electron microscopy)
  Title: structural model of parm filament in closed state from cryo- em
  Author: v. e. galkin, a. orlova, c. rivera, r. d. mullins, e. h. egelman
  Keywords: polymorphic filaments, plasmid, plasmid partition, structural protein
  
• 3ikw.pdb. lyase 06-aug-09 3ikw Ca
  Title: structure of heparinase i from bacteroides thetaiotaomicron
  Author: m. l. garron, m. cygler, d. shaya
  Keywords: polysaccharide lyase, beta-jelly roll, lyase
  
• 3iky.pdb. structural protein 06-aug-09 3iky (electron microscopy)
  Title: structural model of parm filament in the open state by cryo- em
  Author: v. e. galkin, a. orlova, c. rivera, r. d. mullins, e. h. egelman
  Keywords: structural protein, plasmid, plasmid partition
  
• 3ilr.pdb. lyase 07-aug-09 3ilr Ca
  Title: structure of heparinase i from bacteroides thetaiotaomicron in complex with tetrasaccharide product
  Author: m. l. garron, m. cygler, d. shaya
  Keywords: polysaccharide lyase, beta-jelly roll, lyase
  
• 3imn.pdb. lyase 10-aug-09 3imn Ca
  Title: crystal structure of heparin lyase i from bacteroides thetaiotaomicron
  Author: y. h. han, k. s. ryu, y. h. jeon
  Keywords: lyase
  
• 3in9.pdb. lyase 12-aug-09 3in9 Ca
  Title: crystal structure of heparin lyase i complexed with disaccharide heparin
  Author: y. h. han, k. s. ryu, h. y. kim, y. h. jeon
  Keywords: lyase
  
• 3ina.pdb. lyase 12-aug-09 3ina Ca
  Title: crystal structure of heparin lyase i h151a mutant complexed with a dodecasaccharide heparin
  Author: y. h. han, k. s. ryu, h. y. kim, y. h. jeon
  Keywords: lyase
  
• 3ior.pdb. signaling protein 14-aug-09 3ior Zn Ca
  Title: huntingtin amino-terminal region with 17 gln residues - crystal c95
  Author: m. w. kim
  Keywords: htt-ex1, hd, sugar transport, transport, apoptosis, cytoplasm, disease mutation, nucleus, phosphoprotein, polymorphism, triplet repeat expansion, ubl conjugation, signaling protein
  
• 3iot.pdb. signaling protein 14-aug-09 3iot Zn Ca
  Title: huntingtin amino-terminal region with 17 gln residues - crystal c92-b
  Author: m. w. kim
  Keywords: htt-ex1, hd, sugar transport, transport, apoptosis, cytoplasm, disease mutation, nucleus, phosphoprotein, polymorphism, triplet repeat expansion, ubl conjugation, signaling protein
  
• 3iou.pdb. signaling protein 14-aug-09 3iou Zn Ca
  Title: huntingtin amino-terminal region with 17 gln residues - crystal c94
  Author: m. w. kim
  Keywords: htt-ex1, hd, sugar transport, transport, apoptosis, cytoplasm, disease mutation, nucleus, phosphoprotein, polymorphism, triplet repeat expansion, ubl conjugation, signaling protein
  
• 3iov.pdb. signaling protein 14-aug-09 3iov Zn Ca
  Title: huntingtin amino-terminal region with 17 gln residues - crystal c99
  Author: m. w. kim
  Keywords: htt-ex1, hd, sugar transport, transport, apoptosis, cytoplasm, disease mutation, nucleus, phosphoprotein, polymorphism, triplet repeat expansion, ubl conjugation, signaling protein
  
• 3iow.pdb. signaling protein 14-aug-09 3iow Zn Ca
  Title: huntingtin amino-terminal region with 17 gln residues - crystal c99-hg
  Author: m. w. kim
  Keywords: htt-ex1, hd, sugar transport, transport, apoptosis, cytoplasm, disease mutation, nucleus, phosphoprotein, polymorphism, triplet repeat expansion, ubl conjugation, signaling protein
  
• 3ip1.pdb. oxidoreductase 15-aug-09 3ip1 Cl Se Cd
  Title: structure of putative alcohol dehydrogenase (tm_042) from thermotoga maritima
  Author: u. a. ramagopal, r. toro, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
  Keywords: alcohol dehydrogenase, metal-binding, oxidoreductase, zinc, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc
  
• 3ip3.pdb. oxidoreductase 16-aug-09 3ip3 Se
  Title: structure of putative oxidoreductase (tm_0425) from thermotoga maritima
  Author: u. a. ramagopal, c. morano, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
  Keywords: oxidoreductase, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc
  
• 3irc.pdb. viral protein 21-aug-09 3irc
  Title: crystal structure analysis of dengue-1 envelope protein domain iii
  Author: c. a. nelson, t. kim, j. t. warren, m. chruszcz, w. minor, d. h. fremont, center for structural genomics of infectious diseases (csgid)
  Keywords: rna replication, transmembrane, virion
  
• 3iug.pdb. splicing 31-aug-09 3iug
  Title: crystal structure of the rhogap domain of rics
  Author: l. nedyalkova, w. tempel, y. tong, y. li, c. h. arrowsmith, a. m. edwards, c. bountra, j. weigelt, a. bochkarev, h. park, structural genomics consortium (sgc)
  Keywords: postsynaptic cell membrane, sh3 domain, synapse
  
• 3ivd.pdb. hydrolase 31-aug-09 3ivd Cl Mn Fe Se
  Title: putative 5'-nucleotidase (c4898) from escherichia coli in complex with uridine
  Author: u. a. ramagopal, r. toro, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
  Keywords: nucleotidase, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, hydrolase
  
• 3ive.pdb. hydrolase 31-aug-09 3ive Cl Mn Fe Se
  Title: putative 5'-nucleotidase (c4898) from escherichia coli in complex with cytidine
  Author: u. a. ramagopal, r. toro, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
  Keywords: nucleotidase, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, hydrolase
  
• 3iwh.pdb. unknown function 02-sep-09 3iwh Se
  Title: crystal structure of rhodanese-like domain protein from staphylococcus aureus
  Author: y. kim, m. chruszcz, w. minor, a. edwards, w. f. anderson, a. joachimiak, center for structural genomics of infectious diseases (csgid)
  Keywords: alpha-beta-alpha sandwich, structural genomics, center for structural genomics of infectious diseases, csgid, unknown function
  
• 3iwt.pdb. structural genomics, unknown function 03-sep-09 3iwt Mg
  Title: structure of hypothetical molybdenum cofactor biosynthesis protein b from sulfolobus tokodaii
  Author: s. v. antonyuk, m. j. ellis, r. w. strange, s. s. hasnain, y. bessho, s. kuramitsu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: molybdenum cofactor, biosynthesis, structural genomics, unknown function, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 3jq5.pdb. hydrolase 06-sep-09 3jq5 Ca
  Title: phospholipase a2 prevents the aggregation of amyloid beta peptides: crystal structure of the complex of phospholipase a2 with octapeptide fragment of amyloid beta peptide, asp- ala-glu-phe-arg-his-asp-ser at 2 a resolution
  Author: z. mirza, g. vikram, n. singh, m. sinha, a. bhushan, s. sharma, a. srinivasan, p. kaur, t. p. singh
  Keywords: crystal structure, octapeptide, amyloid beta, hydrolase, calcium, disulfide bond, lipid degradation, metal-binding, secreted
  
• 3jql.pdb. hydrolase 07-sep-09 3jql Ca
  Title: crystal structure of the complex formed between phospholipase a2 and a hexapeptide fragment of amyloid beta peptide, lys-leu-val-phe-phe-ala at 1.2 a resolution
  Author: z. mirza, g. vikram, n. singh, m. sinha, s. sharma, a. srinivasan, p. kaur, t. p. singh
  Keywords: crystal structure, hexapeptide, amyloid beta, hydrolase, calcium, disulfide bond, lipid degradation, metal-binding, secreted
  
• 3jr3.pdb. hydrolase 08-sep-09 3jr3 Zn
  Title: sir2 bound to acetylated peptide
  Author: w. f. hawse, c. wolberger
  Keywords: deacetylation, nad+, ribosylation, cytoplasm, hydrolase, metal-binding, nad, zinc
  
• 3jsm.pdb. transferase/dna complex 10-sep-09 3jsm Mg
  Title: k65r mutant hiv-1 reverse transcriptase cross-linked to ds- dna and complexed with tenofovir-diphosphate as the incoming nucleotide substrate
  Author: k. das, e. arnold
  Keywords: multifunctional enzyme, nucleotidyltransferase, rna- directed dna polymerase transferase
  
• 3jtn.pdb. protein binding 14-sep-09 3jtn I
  Title: crystal structure of the c-terminal domain of ypbh
  Author: f. wang, z. mei, y. qi, c. yan, j. wang, y. shi
  Keywords: adaptor protein, competence, sporulation, protein binding
  
• 3jto.pdb. protein binding 14-sep-09 3jto
  Title: crystal structure of the c-terminal domain of ypbh
  Author: f. wang, z. mei, y. qi, c. yan, j. wang, y. shi
  Keywords: adaptor protein, competence, sporulation, protein binding
  
• 3jtp.pdb. protein binding 14-sep-09 3jtp I
  Title: crystal structure of the c-terminal domain of meca
  Author: f. wang, z. mei, y. qi, c. yan, j. wang, y. shi
  Keywords: competence, sporulation, protein binding
  
• 3ju5.pdb. transferase 14-sep-09 3ju5 Mg Se
  Title: crystal structure of dimeric arginine kinase at 1.75-a resolution
  Author: x. wu, s. ye, s. guo, w. yan, m. bartlam, z. rao
  Keywords: reciprocating mechanism, negative cooperativity, phosphagen kinase, atp-binding, kinase, nucleotide-binding, transferase
  
• 3ju6.pdb. transferase 14-sep-09 3ju6 Se
  Title: crystal structure of dimeric arginine kinase in complex with amppnp and arginine
  Author: x. wu, s. ye, s. guo, w. yan, m. bartlam, z. rao
  Keywords: reciprocating mechanism, negative cooperativity, phosphagen kinase, ternary complex, atp- binding, kinase, nucleotide-binding, transferase
  
• 3jum.pdb. biosynthetic protein 15-sep-09 3jum Br
  Title: crystal structure of phza/b from burkholderia cepacia r18194 in complex with 5-bromo-2-((1s,3r)-3- carboxycyclohexylamino)benzoic acid
  Author: m. mentel, r. breinbauer, w. blankenfeldt
  Keywords: drug design, phenazine biosynthesis, medicinal chemistry, inhibitor, biosynthetic protein
  
• 3jun.pdb. biosynthetic protein 15-sep-09 3jun Br
  Title: crystal structure of phza/b from burkholderia cepacia r18194 in simultaneous complex with racemic 5-bromo-2-(piperidin- 3-ylamino)benzoic acid
  Author: m. mentel, r. breinbauer, w. blankenfeldt
  Keywords: drug design, phenazine biosynthesis, racemate, racemic mixture, biosynthetic protein
  
• 3juo.pdb. biosynthetic protein 15-sep-09 3juo Br
  Title: crystal structure of phza/b from burkholderia cepacia r18194 in complex with (r)-5-bromo-2-(piperidin-3-ylamino)benzoic acid
  Author: m. mentel, i. h. jain, r. breinbauer, w. blankenfeldt
  Keywords: drug design, phenazine biosynthesis, medicinal chemistry, inhibitor, biosynthetic protein
  
• 3jup.pdb. biosynthetic protein 15-sep-09 3jup Br
  Title: crystal structure of phza/b from burkholderia cepacia r18194 in complex with (s)-5-bromo-2-(piperidin-3-ylamino)benzoic acid
  Author: m. mentel, i. h. jain, r. breinbauer, w. blankenfeldt
  Keywords: drug design, phenazine biosynthesis, medicinal chemistry, inhibitor, biosynthetic protein
  
• 3juq.pdb. biosynthetic protein 15-sep-09 3juq Br
  Title: crystal structure of phza/b from burkholderia cepacia r18194 cocrystallized with 2 mm racemic 5-bromo-2-(piperidin-3- ylamino)benzoic acid
  Author: m. mentel, r. breinbauer, w. blankenfeldt
  Keywords: drug design, phenazine biosynthesis, racemate, racemic mixture, biosynthetic protein
  
• 3jvc.pdb. lipid binding protein 16-sep-09 3jvc
  Title: crystal structure of the lipoprotein_17 domain from q9pra0_urepa protein of ureaplasma parvum. northeast structural genomics consortium target uur17a.
  Author: s. vorobiev, h. neely, d. lee, c. ciccosanti, l. mao, r. xiao, t. b. acton, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
  Keywords: q9pra0, pf04200, duf1976, uur17a, nesg., structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, lipoprotein, lipid binding protein
  
• 3jvh.pdb. lyase 16-sep-09 3jvh Zn
  Title: crystal structure of 2c-methyl-d-erythritol-2,4- cyclodiphosphate synthase from burkholderia pseudomallei with fol fragment 8395
  Author: seattle structural genomics center for infectious disease (ssgcid)
  Keywords: seattle structural genomics center for infectious disease
  
• 3jvn.pdb. transferase 17-sep-09 3jvn Se
  Title: crystal structure of the acetyltransferase vf_1542 from vibrio fischeri, northeast structural genomics consortium target vfr136
  Author: f. forouhar, h. neely, j. seetharaman, m. mao, r. xiao, c. ciccosanti, l. zhao, j. k. everett, r. nair, t. b. acton, b. rost, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
  Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, acyltransferase, transferase
  
• 3jx9.pdb. isomerase 18-sep-09 3jx9 Cl Se
  Title: crystal structure of putative phosphoheptose isomerase (yp_001815198.1) from exiguobacterium sp. 255-15 at 1.95 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: putative phosphoheptose isomerase, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, unknown function
  
• 3jyf.pdb. hydrolase 21-sep-09 3jyf Mn Se
  Title: the crystal structure of a 2,3-cyclic nucleotide 2- phosphodiesterase/3-nucleotidase bifunctional periplasmic precursor protein from klebsiella pneumoniae subsp. pneumoniae mgh 78578
  Author: y. fan, l. volkart, g. cobb, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: protein structure initiative, midwest center for structural genomics, mcsg, metal- binding, nucleotide-binding, hydrolase
  
• 3jze.pdb. hydrolase 23-sep-09 3jze Cl Zn
  Title: 1.8 angstrom resolution crystal structure of dihydroorotase (pyrc) from salmonella enterica subsp. enterica serovar typhimurium str. lt2
  Author: g. minasov, a. halavaty, l. shuvalova, i. dubrovska, j. winsor, l. papazisi, w. f. anderson, center for structural genomics of infectious diseases (csgid)
  Keywords: pyrc, idp00873, hydrolase, metal-binding, pyrimidine biosynthesis, zinc, structural genomics, center for structural genomics of infectious diseases, csgid
  
• 5rat.pdb. hydrolase (nucleic acid,rna) 13-aug-91 5rat
  Title: effects of temperature on protein structure and dynamics: x- ray crystallographic studies of the protein ribonuclease-a at nine different temperatures from 98 to 320 k
  Author: r. f. tiltonjunior, j. c. dewan, g. a. petsko
  Keywords: rna)