Recent PDB releases or updates: week of 7 August 2009

• 1ax1.pdb. lectin 24-oct-97 1ax1 Mn Ca
  Title: erythrina corallodendron lectin in complex with lactose
  Author: b. shaanan, s. elgavish
  Keywords: glycoprotein, signal
  
• 1bag.pdb. alpha-amylase 30-jan-98 1bag Ca
  Title: alpha-amylase from bacillus subtilis complexed with maltopentaose
  Author: z. fujimoto, h. mizuno, k. takase, n. doui
  Keywords: bacillus subtilis, maltopentaose, catalytic- site mutant
  
• 1bg3.pdb. hexokinase 04-jun-98 1bg3 Ca
  Title: rat brain hexokinase type i complex with glucose and inhibitor glucose-6-phosphate
  Author: a. m. mulichak, r. m. garavito
  Keywords: phosphotransferase
  
• 1bg9.pdb. hydrolase 05-jun-98 1bg9 Ca
  Title: barley alpha-amylase with substrate analogue acarbose
  Author: a. kadziola, r. haser
  Keywords: o-glycosyl
  
• 1cel.pdb. hydrolase(o-glycosyl) 17-may-94 1cel I Ca
  Title: the three-dimensional crystal structure of the catalytic core of cellobiohydrolase i from trichoderma reesei
  Author: c. divne, t. a. jones
  
  
• 1cen.pdb. cellulose degradation 04-dec-95 1cen
  Title: cellulase (celc) mutant with glu 140 replaced by gln complexed with cellohexaose
  Author: r. dominguez, p. m. alzari
  Keywords: cellulase, family a/5 of glycosyl hydrolases, clostridium thermocellum, cellulose degradation
  
• 1ct1.pdb. enterotoxin 03-jun-97 1ct1 Cl
  Title: cholera toxin b-pentamer mutant g33r bound to receptor pentasaccharide
  Author: e. a. merritt, w. g. j. hol
  Keywords: toxin/receptor complex, oligosaccharide
  
• 1e0m.pdb. de novo protein 01-apr-00 1e0m (solution NMR)
  Title: prototype ww domain
  Author: m. j. macias, v. gervais, c. civera, h. oschkinat
  Keywords: wwprototype, protein design, de novo protein
  
• 1e12.pdb. transport protein 14-apr-00 1e12 Cl K
  Title: halorhodopsin, a light-driven chloride pump
  Author: m. kolbe, h. besir, l. -o. essen, d. oesterhelt
  Keywords: chloride pump, membrane protein, retinal protein, lipids, palmitate, haloarchaea, chloride transport, transport protein
  
• 1ece.pdb. glycosyl hydrolase 04-apr-96 1ece
  Title: acidothermus cellulolyticus endocellulase e1 catalytic domain in complex with a cellotetraose
  Author: j. sakon, s. r. thomas, m. e. himmel, p. a. karplus
  Keywords: endocellulase, glycosyl hydrolase
  
• 1exp.pdb. hydrolase 11-jan-96 1exp F
  Title: beta-1,4-glycanase cex-cd
  Author: a. white, d. tull, k. l. johns, s. g. withers, d. r. rose
  Keywords: hydrolase, glycosidase, repeat, signal
  
• 1fv7.pdb. dna 19-sep-00 1fv7 (solution NMR)
  Title: a two b-z junction containing dna resolves into an all right handed double helix
  Author: o. mauffret, c. el amri, f. santamaria, g tevanian, b. rayner, s. fermandjian
  Keywords: l enantiomery, antisense
  
• 1hgg.pdb. viral protein 01-nov-91 1hgg
  Title: binding of influenza virus hemagglutinin to analogs of its cell-surface receptor, sialic acid: analysis by proton nuclear magnetic resonance spectroscopy and x-ray crystallography
  Author: n. k. sauter, j. e. hanson, g. d. glick, j. h. brown, r. l. crowther, s. - j. park, j. j. skehel, d. c. wiley
  Keywords: viral protein
  
• 1hkb.pdb. phosphotransferase 01-dec-97 1hkb Ca
  Title: crystal structure of recombinant human brain hexokinase type i complexed with glucose and glucose-6-phosphate
  Author: a. e. aleshin, c. zeng, g. p. burenkov, h. d. bartunik, h. j. fromm, r. b. honzatko
  Keywords: glycolysis, allosteric enzyme, glucose, glucose-6-phosphate
  
• 1hkc.pdb. phosphotransferase 01-jul-98 1hkc K
  Title: recombinant human hexokinase type i complexed with glucose and phosphate
  Author: a. e. aleshin, r. b. honzatko
  Keywords: glycolysis, allosteric enzyme, glucose, phosphate
  
• 1hx0.pdb. hydrolase 11-jan-01 1hx0 Cl Ca
  Title: structure of pig pancreatic alpha-amylase complexed with the "truncate" acarbose molecule (pseudotrisaccharide)
  Author: m. qian, f. payan
  Keywords: inhibitor, carbohydrate, pancreas, hydrolase
  
• 1k7v.pdb. sugar binding protein 22-oct-01 1k7v
  Title: crystal structure analysis of crosslinked-wga3/glcnacbeta1, 6galbeta1,4glc
  Author: m. muraki, m. ishimura, k. harata
  Keywords: sugar binding protein
  
• 1p4e.pdb. dna binding protein/recombination/dna 23-apr-03 1p4e
  Title: flpe w330f mutant-dna holliday junction complex
  Author: p. a. rice, y. chen
  Keywords: holliday junction, site-specific recombination, w330, flpe, dna binding protein/recombination/dna complex
  
• 1p58.pdb. virus 25-apr-03 1p58 (electron microscopy)
  Title: complex organization of dengue virus membrane proteins as revealed by 9.5 angstrom cryo-em reconstruction
  Author: w. zhang, p. r. chipman, j. corver, p. r. johnson, y. zhang, s. mukhopadhyay, t. s. baker, j. h. strauss, m. g. rossmann, r. j. kuhn
  Keywords: flaviviridae, dengue virus, glycoprotein e from tick-borne encephalitis virus, membrane protein m, cryo-em, icosahedral virus
  
• 1q33.pdb. hydrolase 28-jul-03 1q33 Se
  Title: crystal structure of human adp-ribose pyrophosphatase nudt9
  Author: b. w. shen, a. l. perraud, a. scharenberg, b. l. stoddard
  Keywords: hydrolase
  
• 1q6g.pdb. hydrolase 13-aug-03 1q6g
  Title: crystal structure of soybean beta-amylase mutant (n340t) with increased ph optimum
  Author: a. hirata, m. adachi, a. sekine, y. n. kang, s. utsumi, b. mikami
  Keywords: beta-amylase, maltose complex, increased ph optimum, hydrolase
  
• 1r3o.pdb. rna 02-oct-03 1r3o
  Title: crystal structure of the first rna duplex in l-conformation at 1.9a resolution
  Author: m. vallazza, m. perbandt, s. klussmann, w. rypniewski, v. a. erdmann, c. betzel
  
  
• 1r4d.pdb. dna 06-oct-03 1r4d (solution NMR)
  Title: solution structure of the chimeric l/d dna oligonucleotide d(c8metgcgc(l)g(l)cgcg)2
  Author: i. cherrak, o. mauffret, f. santamaria, b. rayner, a. hocquet, m. ghomi, s. fermandjian
  Keywords: l enantiomery, antisense, hybrid zbz dna
  
• 1sid.pdb. virus 12-dec-95 1sid
  Title: murine polyomavirus complexed with 3'sialyl lactose
  Author: t. stehle, s. c. harrison
  Keywords: icosahedral virus
  
• 1thd.pdb. virus 01-jun-04 1thd (electron microscopy)
  Title: complex organization of dengue virus e protein as revealed by 9.5 angstrom cryo-em reconstruction
  Author: y. zhang, w. zhang, s. ogata, d. clements, j. h. strauss, t. s. baker, r. j. kuhn, m. g. rossmann
  Keywords: flaviviridae, dengue virus, glycoprotein e, cryo-em, cryo-electron microscopy, icosahedral virus
  
• 1ua3.pdb. hydrolase 27-feb-03 1ua3 Cl Ca
  Title: crystal structure of the pig pancreatic a-amylase complexed with malto-oligosaccharides
  Author: f. payan, m. qian
  Keywords: hydrolase
  
• 1ugy.pdb. sugar binding protein 23-jun-03 1ugy
  Title: crystal structure of jacalin- mellibiose (gal-alpha(1-6)- glc) complex
  Author: a. a. jeyaprakash, s. katiyar, c. p. swaminathan, k. sekar, a. surolia, m. vijayan
  Keywords: beta-prism i fold, gal specific, sugar binding protein
  
• 1ulc.pdb. sugar binding protein 12-sep-03 1ulc
  Title: cgl2 in complex with lactose
  Author: p. j. walser, p. w. haebel, m. kuenzler, u. kues, m. aebi, n. ban
  Keywords: lectin, beta-galactoside binding lectin, sugar binding, sugar binding protein
  
• 1ulf.pdb. sugar binding protein 12-sep-03 1ulf
  Title: cgl2 in complex with blood group a tetrasaccharide
  Author: p. j. walser, p. w. haebel, m. kuenzler, u. kues, m. aebi, n. ban
  Keywords: lectin, beta-galactoside binding lectin, sugar binding, sugar binding protein
  
• 1url.pdb. sugar binding protein/immune system 31-oct-03 1url
  Title: n-terminal domain of sialoadhesin (mouse) in complex with glycopeptide
  Author: j. t. bukrinsky, p. m. s. hilaire, m. meldal, p. r. crocker, a. henriksen
  Keywords: sialoadhesin, oligosaccharide mimics, molecular mimicry, cell adhesion, lectin, immunoglobulin domain, sugar binding protein immune system complex, sugar binding protein, immune system
  
• 1v3i.pdb. hydrolase 02-nov-03 1v3i
  Title: the roles of glu186 and glu380 in the catalytic reaction of soybean beta-amylase
  Author: y. n. kang, m. adachi, s. utsumi, b. mikami
  Keywords: hydrolase
  
• 1v6l.pdb. sugar binding protein 01-dec-03 1v6l Mn Ca
  Title: peanut lectin-lactose complex in the presence of 9mer peptide (pviwssatg)
  Author: s. kundhavai natchiar, a. arockia jeyaprakash, t. n. c. ramya, c. j. thomas, k. suguna, a. surolia, m. vijayan
  Keywords: open quaternary association, orthorhombic, carbohydrate specificity, protein crystallography, agglutinin, peptide, sugar binding protein
  
• 1veo.pdb. hydrolase 03-apr-04 1veo Ca
  Title: crystal structure analysis of y164f/maltose of bacillus cereus beta-amylase at ph 4.6
  Author: a. hirata, m. adachi, s. utsumi, b. mikami
  Keywords: optimum ph, y164f, hydrolase
  
• 1vep.pdb. hydrolase 03-apr-04 1vep Ca
  Title: crystal structure analysis of triple (t47m/y164e/t328n) /maltose of bacillus cereus beta-amylase at ph 6.5
  Author: a. hirata, m. adachi, s. utsumi, b. mikami
  Keywords: optimum ph, t47m/y164e/t328n, hydrolase
  
• 1wds.pdb. hydrolase 17-may-04 1wds
  Title: the role of an inner loop in the catalytic mechanism of soybean beta-amylase
  Author: y. n. kang, m. adachi, s. utsumi, b. mikami
  Keywords: hydrolase
  
• 1wld.pdb. sugar binding protein 22-jun-04 1wld
  Title: congerin ii t88i single mutant
  Author: c. shionyu-mitsuyama, y. ito, a. konno, y. miwa, t. ogawa, k. muramoto, t. shirai
  Keywords: beta-sandwich, thermostability, mutant, sugar binding protein
  
• 1wo2.pdb. hydrolase 11-aug-04 1wo2 Cl Ca
  Title: crystal structure of the pig pancreatic alpha-amylase complexed with malto-oligosaacharides under the effect of the chloride ion
  Author: m. qian, f. payan, v. nahoum
  Keywords: hydrolase
  
• 1woq.pdb. transferase 24-aug-04 1woq
  Title: crystal structure of inorganic polyphosphate/atp- glucomannokinase from arthrobacter sp. strain km at 1.8 a resolution
  Author: t. mukai, s. kawai, s. mori, b. mikami, k. murata
  Keywords: glucomannokinase, atp, transferase
  
• 1yf8.pdb. hydrolase 31-dec-04 1yf8
  Title: crystal structure of himalayan mistletoe rip reveals the presence of a natural inhibitor and a new functionally active sugar-binding site
  Author: v. mishra, s. bilgrami, r. s. sharma, p. kaur, s. yadav, c. betzel, c. r. babu, t. p. singh
  Keywords: ribosome inactivating protein, viscum album, crystal structure, natural inhibitor, sugar-binding site, hydrolase
  
• 1yyn.pdb. hydrolase 25-feb-05 1yyn
  Title: a common binding site for disialyllactose and a tri-peptide in the c-fragment of tetanus neurotoxin
  Author: j. seetharaman, s. eswaramoorthy, d. kumaran, s. swaminathan
  Keywords: gd3, ganglioside, x-ray crystallography, beta-trefoil, inhibitors, hydrolase
  
• 1zm1.pdb. hydrolase 10-may-05 1zm1 Ca Se
  Title: crystal structures of complex f. succinogenes 1,3-1,4-beta- d-glucanase and beta-1,3-1,4-cellotriose
  Author: l. c. tsai, l. f. shyur, y. s. cheng, s. h. lee
  Keywords: 3-1,4-beta-d-glucanase, beta-1,3-1,4-cellotriose (cltr), active cleft, hydrolase
  
• 1zv9.pdb. cellulosome 01-jun-05 1zv9 Se
  Title: crystal structure analysis of a type ii cohesin domain from the cellulosome of acetivibrio cellulolyticus- semet derivative
  Author: i. noach, s. rosenheck, r. lamed, l. shimon, e. bayer, f. frolow
  
  
• 2aai.pdb. glycosidase 07-sep-93 2aai
  Title: crystallographic refinement of ricin to 2.5 angstroms
  Author: e. rutenber, b. j. katzin, w. montfort, j. e. villafranca, s. r. ernst, e. j. collins, d. mlsna, a. f. monzingo, m. p. ready, j. d. robertus
  
  
• 2asv.pdb. transferase 24-aug-05 2asv
  Title: x-ray studies on protein complexes: enzymatic catalysis in crystals of e. coli maltodextrin phosphorylase (malp)
  Author: s. geremia, m. campagnolo
  Keywords: carbohydrate recognition, phosphorylase mechanism, ternary oligosaccharide complexes, diffusion of substrates in the crystal, catalysis in the crystal, transferase
  
• 2av6.pdb. transferase 29-aug-05 2av6
  Title: x-ray studies on maltodextrin phosphorylase complexes: recognition of substrates and cathalitic mechanism of phosphorylase family
  Author: s. geremia, m. campagnolo
  Keywords: carbohydrate recognition, phosphorylase mechanism, ternary complexes with natural and inhibitory substrates, transferase
  
• 2azd.pdb. transferase 10-sep-05 2azd V
  Title: x-ray studies on maltodextrin phosphorylase (malp) complexes: recognition of substrates and catalytic mechanism of phosphorylase family
  Author: s. geremia, m. campagnolo
  Keywords: carbohydrate recognition, phosphorylase mechanism, ternary complexes with natural and inhibitory substrates, transferase
  
• 2b6b.pdb. virus/receptor 30-sep-05 2b6b (electron microscopy)
  Title: cryo em structure of dengue complexed with crd of dc-sign
  Author: e. pokidysheva, y. zhang, a. j. battisti, c. m. bator-kelly, p. r. chipman, g. gregorio, w. a. hendrickson, r. j. kuhn, m. g. rossmann
  Keywords: icosahedral virus, virus/receptor complex
  
• 2cqs.pdb. transferase 20-may-05 2cqs
  Title: crystal structure of cellvibrio gilvus cellobiose phosphorylase crystallized from ammonium sulfate
  Author: m. hidaka, m. kitaoka, k. hayashi, t. wakagi, h. shoun, s. fushinobu
  Keywords: (alpha/alpha)6 barrel, transferase
  
• 2cqt.pdb. transferase 20-may-05 2cqt
  Title: crystal structure of cellvibrio gilvus cellobiose phosphorylase crystallized from sodium/potassium phosphate
  Author: m. hidaka, m. kitaoka, k. hayashi, t. wakagi, h. shoun, s. fushinobu
  Keywords: (alpha/alpha)6 barrel, transferase
  
• 2d0f.pdb. hydrolase 02-aug-05 2d0f Ca
  Title: crystal structure of thermoactinomyces vulgaris r-47 alpha- amylase 1 (tvai) mutant d356n complexed with p2, a pullulan model oligosaccharide
  Author: a. abe, h. yoshida, t. tonozuka, y. sakano, s. kamitori
  Keywords: hydrolase
  
• 2d0g.pdb. hydrolase 02-aug-05 2d0g Ca
  Title: crystal structure of thermoactinomyces vulgaris r-47 alpha- amylase 1 (tvai) mutant d356n/e396q complexed with p5, a pullulan model oligosaccharide
  Author: a. abe, h. yoshida, t. tonozuka, y. sakano, s. kamitori
  Keywords: hydrolase
  
• 2drz.pdb. sugar binding protein 16-jun-06 2drz
  Title: crystal structure of the earthworm lectin c-terminal domain mutant in complex with lactose
  Author: r. suzuki, z. fujimoto
  Keywords: sialic acid, galactose, in vitro evolution, beta-trefoil fold, sugar complex, sugar binding protein
  
• 2ds0.pdb. sugar binding protein 16-jun-06 2ds0
  Title: crystal structure of the earthworm lectin c-terminal domain mutant in complex with 6'-sialyllactose
  Author: r. suzuki, z. fujimoto
  Keywords: sialic acid, galactose, in vitro evolution, beta-trefoil fold, sugar complex, sugar binding protein
  
• 2dvg.pdb. sugar binding protein 31-jul-06 2dvg Mn Ca
  Title: crystal structure of peanut lectin gal-alpha-1,6-glc complex
  Author: s. k. natchiar, o. srinivas, n. mitra, a. surolia, n. jayaraman, m. vijayan
  Keywords: agglutinin, open quaternary structure, carbohydrate specificity, sugar binding protein
  
• 2e2o.pdb. transferase 15-nov-06 2e2o
  Title: crystal structure of sulfolobus tokodaii hexokinase in complex with glucose
  Author: h. nishimasu, s. fushinobu, h. shoun, t. wakagi
  Keywords: hsp70, actin superfamily, ribonuclease-h fold, sugar kinase, glucose, n- acetylglucosamine,hexokinase, conformational change, phosphoryl transfer, transferase
  
• 2e52.pdb. hydrolase/dna 18-dec-06 2e52
  Title: crystal structural analysis of hindiii restriction endonuclease in complex with cognate dna at 2.0 angstrom resolution
  Author: n. watanabe, c. sato, i. tanaka
  Keywords: hydrolase/dna complex
  
• 2ead.pdb. hydrolase 31-jan-07 2ead Ca
  Title: crystal structure of 1,2-a-l-fucosidase from bifidobacterium bifidum in complex with substrate
  Author: m. nagae, a. tsuchiya, t. katayama, k. yamamoto, s. wakatsuki, r. kato
  Keywords: glycoside hydrolase
  
• 2ebf.pdb. toxin 08-feb-07 2ebf
  Title: crystal structures reveal a thiol-protease like catalytic triad in the c-terminal region of pasteurella multocida toxin
  Author: k. kitadokoro, y. horiguchi, s. kamitani
  Keywords: trojan horse-like fold
  
• 2gdv.pdb. transferase 17-mar-06 2gdv
  Title: sucrose phosphorylase from bifidobacterium adolescentis reacted with sucrose
  Author: l. k. skov, o. mirza, m. gajhede, j. s. katsrup
  Keywords: dimer, glycoside hydrolase, transferase
  
• 2jii.pdb. transferase 28-jun-07 2jii
  Title: structure of vaccinia related kinase 3
  Author: g. bunkoczi, j. eswaran, a. c. w. pike, j. uppenberg, e. ugochukwu, f. von delft, c. cooper, e. salah, p. savitsky, n. burgess-brown, t. keates, o. fedorov, f. sobott, c. h. arrowsmith, a. edwards, m. sundstrom, j. weigelt, s. knapp
  Keywords: pseudo kinase domain, vaccinia related kinase, serine/threonine-protein kinase, vrk3, kinase, atp-binding, nucleotide-binding, alternative splicing
  
• 2jjn.pdb. oxidoreductase 15-apr-08 2jjn Fe
  Title: structure of closed cytochrome p450 eryk
  Author: c. savino, g. sciara, a. e. miele, s. g. kendrew, b. vallone
  Keywords: iron, heme, monooxygenase, metal-binding, antibiotic biosynthesis, tie-rod mechanism of action, cytochrome p450, substrate specificity
  
• 2jjo.pdb. oxidoreductase 15-apr-08 2jjo Fe
  Title: structure of cytochrome p450 eryk in complex with its natural substrate erd
  Author: c. savino, g. sciara, a. e. miele, s. g. kendrew, b. vallone
  Keywords: heme, monooxygenase, metal-binding, antibiotic biosynthesis, tie-rod mechanism of action, oxidoreductase, cytochrome p450, substrate specificity
  
• 2jle.pdb. transferase 08-sep-08 2jle F
  Title: novel indazole nnrtis created using molecular template hybridization based on crystallographic overlays
  Author: l. h. jones, g. allan, o. barba, c. burt, r. corbau, t. dupont, s. irving, c. e. mowbray, c. phillips, n. a. swain, r. webster, m. westby
  Keywords: nnrti, hiv-1, virion, nucleus, protease
  
• 2jxw.pdb. formin binding protein 30-nov-07 2jxw (solution NMR)
  Title: solution structure of the tandem ww domains of fbp21
  Author: x. huang, j. zhang, j. wu, y. shi
  Keywords: ww domain, fbp21, wbp4, metal- binding, mrna processing, mrna splicing, nucleus, polymorphism, spliceosome, zinc, zinc-finger, formin binding protein
  
• 2kb7.pdb. membrane protein 21-nov-08 2kb7 (solution NMR; solid-state NMR)
  Title: hybrid solution and solid-state nmr structure of monomeric phospholamban in lipid bilayers
  Author: n. j. traaseth, l. shi, r. verardi, g. veglia
  Keywords: solution nmr, solid-state nmr, pisema, hybrid method, lipid bilayers, topology, membrane protein
  
• 2kc6.pdb. signaling protein 17-dec-08 2kc6 (solution NMR)
  Title: nmr solution structure of the pheromone en-1 of euplotes nobilii at -1.5 c
  Author: b. pedrini, c. alimenti, a. vallesi, p. luporini, k. wuthrich
  Keywords: secreted, signaling protein
  
• 2ket.pdb. antibiotic 03-feb-09 2ket (solution NMR)
  Title: solution structure of bmap-27
  Author: s. yang, h. jung, j. kim
  Keywords: antibiotic, antimicrobial, fungicide, pyrrolidone carboxylic acid, secreted
  
• 2kj6.pdb. chaperone 22-may-09 2kj6 (solution NMR)
  Title: nmr solution structure of a tubulin folding cofactor b obtained from arabidopsis thaliana: northeast structural genomics consortium target ar3436a
  Author: r. mani, g. v. t. swapna, r. shastry, e. foote, c. ciccosanti, m. jiang, r. xiao, r. nair, j. everett, y. j. huang, t. acton, b. rost, g. t. montelione, northeast structural genomics consortium (nesg)
  Keywords: nesg, ar3436a, arabidopsis thaliana, tubulin folding cofactor b, solution nmr, psi-2, structural genomics, protein structure initiative, northeast structural genomics consortium, chaperone
  
• 2kkk.pdb. dna 25-jun-09 2kkk (solution NMR)
  Title: an i-motif structure with intercalated t t pairs
  Author: j. leroy, m. canalia
  
  
• 2kl2.pdb. structural genomics, unknown function 30-jun-09 2kl2 (solution NMR)
  Title: nmr solution structure of gi-13879369
  Author: b. pedrini, p. serrano, b. mohanty, m. geralt, t. herrmann, k. wuthrich, i. wilson, joint center for structural genomics (jcsg)
  Keywords: alternative splicing, structural genomics, psi-2, protein structure initiative, joint center for structural genomics, jcsg, unknown function
  
• 2mpr.pdb. outer membrane protein 07-feb-97 2mpr Ca
  Title: maltoporin from salmonella typhimurium
  Author: j. e. w. meyer, g. e. schulz
  Keywords: oligosaccharide binding, sugar transport, phage recognition
  
• 2o9t.pdb. hydrolase 14-dec-06 2o9t
  Title: beta-glucosidase b from bacillus polymyxa complexed with glucose
  Author: p. isorna, j. polaina, j. sanz-aparicio
  Keywords: glycosyl hydrolase family 1, glucose complex
  
• 2of6.pdb. virus 02-jan-07 2of6 (electron microscopy)
  Title: structure of immature west nile virus
  Author: y. zhang, b. kaufmann, p. r. chipman, r. j. kuhn, m. g. rossmann
  Keywords: icosahedral virus
  
• 2pi6.pdb. signaling protein 13-apr-07 2pi6
  Title: crystal structure of the sheep signalling glycoprotein (sps- 40) complex with 2-methyl-2-4-pentanediol at 1.65a resolution reveals specific binding characteristics of sps- 40
  Author: p. sharma, n. singh, s. sharma, p. kaur, c. betzel, t. p. singh
  Keywords: binding, signaling protein
  
• 2qpu.pdb. hydrolase 25-jul-07 2qpu Ca
  Title: sugar tongs mutant s378p in complex with acarbose
  Author: n. aghajari, m. h. jensen, s. tranier, r. haser
  Keywords: sugar tongs mutant complex, calcium, carbohydrate metabolism, germination, glycosidase, hydrolase, metal-binding, secreted
  
• 2r6p.pdb. virus/immune system 06-sep-07 2r6p (electron microscopy)
  Title: fit of e protein and fab 1a1d-2 into 24 angstrom resolution cryoem map of fab complexed with dengue 2 virus.
  Author: s. m. lok, v. k. kostyuchenko, h. a. holdaway, p. r. chipman, r. j kuhn, m. g rossmann
  Keywords: dengue, virus, neutralization, virus/immune system complex, icosahedral virus
  
• 2rpn.pdb. structural protein 12-jun-08 2rpn (solution NMR)
  Title: a crucial role for high intrinsic specificity in the function of yeast sh3 domains
  Author: e. j. stollar, b. garcia, a. chong, j. forman-kay, a. davidson
  Keywords: extended peptide, 3-10 helix, acetylation, actin-binding, cytoplasm, cytoskeleton, phosphoprotein, structural protein
  
• 2rpr.pdb. metal binding protein 24-jul-08 2rpr Zn (solution NMR)
  Title: solution structure of the fifth flywch domain of flywch-type zinc finger-containing protein 1
  Author: m. enomoto, k. saito, n. tochio, t. kigawa, s. yokoyama, n. nameki
  Keywords: alternative splicing, dna-binding, metal- binding, nucleus, zinc, zinc-finger, metal binding protein
  
• 2rq4.pdb. transcription 19-jan-09 2rq4 (solution NMR)
  Title: refinement of rna binding domain 3 in cug triplet repeat rna-binding protein 1
  Author: k. tsuda, k. kuwasako, m. takahashi, t. someya, m. inoue, t. terada, n. kobayashi, m. shirouzu, t. kigawa, p. guntert, y. muto, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2rqc.pdb. transcription/rna 09-apr-09 2rqc (solution NMR)
  Title: solution structure of rna-binding domain 3 of cugbp1 in complex with rna (ug)3
  Author: k. tsuda, k. kuwasako, m. takahashi, t. someya, y. muto, m. inoue, t. kigawa, t. terada, m. shirouzu, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: activator, alternative splicing, cytoplasm, mrna processing, nucleus, phosphoprotein, rna-binding
  
• 2v62.pdb. transferase 13-jul-07 2v62 Mg
  Title: structure of vaccinia-related kinase 2
  Author: g. bunkoczi, j. eswaran, c. cooper, o. fedorov, t. keates, p. rellos, e. salah, p. savitsky, e. ugochukwu, f. von delft, c. h. arrowsmith, a. edwards, m. sundstrom, j. weigelt, s. knapp
  Keywords: hypothetical protein, alternative splicing, serine/threonine kinase, transferase, atp-binding, kinase, membrane, nucleotide-binding, polymorphism, transmembrane
  
• 2vfd.pdb. isomerase 03-nov-07 2vfd
  Title: crystal structure of the f96s mutant of plasmodium falciparum triosephosphate isomerase
  Author: p. gayathri, m. banerjee, a. vijayalakshmi, h. balaram, p. balaram, m. r. n. murthy
  Keywords: fatty acid biosynthesis, triosephosphate isomerase, pentose shunt, gluconeogenesis, lipid synthesis, tim, mutant, loop open, isomerase, glycolysis
  
• 2vfe.pdb. isomerase 03-nov-07 2vfe
  Title: crystal structure of f96s mutant of plasmodium falciparum triosephosphate isomerase with 3-phosphoglycerate bound at the dimer interface
  Author: p. gayathri, m. banerjee, a. vijayalakshmi, h. balaram, p. balaram, m. r. n. murthy
  Keywords: plasmodium falciparum, isomerase, glycolysis, pentose shunt, gluconeogenesis, lipid synthesis, dimer interface, fatty acid biosynthesis, triosephosphate isomerase
  
• 2vff.pdb. isomerase 04-nov-07 2vff
  Title: crystal structure of the f96h mutant of plasmodium falciparum triosephosphate isomerase
  Author: p. gayathri, m. banerjee, a. vijayalakshmi, h. balaram, p. balaram, m. r. n. murthy
  Keywords: fatty acid biosynthesis, triosephosphate isomerase, pentose shunt, gluconeogenesis, lipid synthesis, tim, mutant, loop open, isomerase, glycolysis
  
• 2vfg.pdb. isomerase 04-nov-07 2vfg
  Title: crystal structure of the f96h mutant of plasmodium falciparum triosephosphate isomerase with 3- phosphoglycerate bound at the dimer interface
  Author: p. gayathri, m. banerjee, a. vijayalakshmi, h. balaram, p. balaram, m. r. n. murthy
  Keywords: fatty acid biosynthesis, triosephosphate isomerase, pentose shunt, gluconeogenesis, lipid synthesis, tim, mutant, loop open, isomerase, glycolysis
  
• 2vfh.pdb. isomerase 04-nov-07 2vfh
  Title: crystal structure of the f96w mutant of plasmodium falciparum triosephosphate isomerase complexed with 3- phosphoglycerate
  Author: p. gayathri, m. banerjee, a. vijayalakshmi, h. balaram, p. balaram, m. r. n. murthy
  Keywords: fatty acid biosynthesis, triosephosphate isomerase, pentose shunt, gluconeogenesis, lipid synthesis, tim, mutant, loop open, isomerase, glycolysis
  
• 2vfi.pdb. isomerase 04-nov-07 2vfi
  Title: crystal structure of the plasmodium falciparum triosephosphate isomerase in the loop closed state with 3- phosphoglycerate bound at the active site and interface
  Author: p. gayathri, m. banerjee, a. vijayalakshmi, h. balaram, p. balaram, m. r. n. murthy
  Keywords: fatty acid biosynthesis, triosephosphate isomerase, tim, mutant, isomerase, glycolysis, loop closed, pentose shunt, gluconeogenesis, lipid synthesis
  
• 2vm5.pdb. apoptosis 23-jan-08 2vm5 Zn
  Title: human bir2 domain of baculoviral inhibitor of apoptosis repeat-containing 1 (birc1)
  Author: m. d. herman, m. welin, c. h. arrowsmith, h. berglund, r. d. busam, r. collins, l. g. dahlgren, a. m. edwards, s. flodin, a. flores, s. graslund, m. hammarstrom, i. johansson, a. kallas, t. karlberg, t. kotenyova, l. lehtio, m. moche, m. e. nilsson, t. nyman, c. persson, j. sagemark, l. svensson, a. g. thorsell, l. tresaugues, s. van den berg, j. weigelt, p. nordlund, structural genomics consortium (sgc)
  Keywords: iap, bir2, birc1, apoptosis, polymorphism
  
• 2vnf.pdb. cell cycle 04-feb-08 2vnf Zn Na
  Title: molecular basis of histone h3k4me3 recognition by ing4
  Author: a. palacios, i. g. munoz, d. pantoja-uceda, m. j. marcaida, d. torres, j. m. martin-garcia, i. luque, g. montoya, f. j. blanco
  Keywords: alternative splicing, anti-oncogene, cell cycle, coiled c nucleus, zinc, zinc-finger, ing4, phd finger, histone 3
  
• 2vuh.pdb. dna-binding 26-may-08 2vuh
  Title: crystal structure of the d55e mutant of the hupr receiver domain
  Author: k. m. davies, e. d. lowe, c. venien-bryan, l. n. johnson
  Keywords: response regulator
  
• 2wa1.pdb. transferase 02-feb-09 2wa1
  Title: structure of the methyltransferase domain from modoc virus, a flavivirus with no known vector (nkv)
  Author: a. m. jansson, p. johansson, t. a. jones
  Keywords: transmembrane, envelope protein, virus replication, virion, membrane, flavivirus, modoc virus, 2'-o- methyltransferase, methyltransferase, n7-methyltransferase
  
• 2wa2.pdb. transferase 02-feb-09 2wa2
  Title: structure of the methyltransferase domain from modoc virus, a flavivirus with no known vector (nkv)
  Author: a. m. jansson, p. johansson, t. a. jones
  Keywords: s-adenosyl-l- methionine, virion, membrane, flavivirus, modoc virus, n7-methyltransferase, 2'-o-methyltransferase, transmembrane, envelope protein, methyltransferase
  
• 2wf2.pdb. hydrolase 02-apr-09 2wf2
  Title: human bace-1 in complex with 8-ethyl-n-((1s,2r)-2-hydroxy-3- (((3-(methyloxy)phenyl)methyl)amino)-1-(phenylmethyl) propyl)-1-methyl-3,4,7,8-tetrahydro-1h,6h-(1,2,5) thiadiazepino(5,4,3-de)quinoxaline-10-carboxamide 2,2- dioxide
  Author: n. charrier, b. clarke, e. demont, c. dingwall, r. dunsdon, j. hawkins, j. hubbard, i. hussain, g. maile, r. matico, j. mosley, a. naylor, a. o'brien, s. redshaw, p. rowland, v. soleil, k. j. smith, s. sweitzer, p. theobald, d. vesey, d. s. walter, g. wayne
  Keywords: beta-site app cleaving enzyme
  
• 2wfo.pdb. viral protein 09-apr-09 2wfo
  Title: crystal structure of machupo virus envelope glycoprotein gp1
  Author: t. a. bowden, m. crispin, s. c. graham, d. j. harvey, j. m. grimes, e. y. jones, d. i. stuart
  Keywords: arenavirus, new world arenavirus, hemorrhagic fever virus, envelope protein, machupo, junin, guanarito, sabia, chapare, virion, macv, gp1, viral attachment, transferrin receptor, viral protein
  
• 2wgm.pdb. membrane protein 21-apr-09 2wgm Na
  Title: complete ion-coordination structure in the rotor ring of na- dependent f-atp synthase
  Author: t. meier, d. pogoryelov, k. diederichs
  Keywords: transmembrane, c-ring structure, sodium transport, ion transport, cell membrane, atp synthesis
  
• 2wh2.pdb. ribosome 30-apr-09 2wh2
  Title: insights into translational termination from the structure of rf2 bound to the ribosome
  Author: a. weixlbaumer, h. jin, c. neubauer, r. m. voorhees, s. petry, a. c. kelley, v. ramakrishnan
  Keywords: trna, mrna, translation, termination, rf2
  
• 2wh4.pdb. ribosome 30-apr-09 2wh4
  Title: insights into translational termination from the structure of rf2 bound to the ribosome
  Author: a. weixlbaumer, h. jin, c. neubauer, r. m. voorhees, s. petry, a. c. kelley, v. ramakrishnan
  Keywords: ribonucleoprotein, trna-binding, rrna-binding, metal-binding, translation regulation, rf2, trna, zinc, mrna, ribosome, repressor, rna-binding, methylation, translation, termination
  
• 2wii.pdb. immune system 12-may-09 2wii Ca
  Title: complement c3b in complex with factor h domains 1-4
  Author: j. wu, b. j. c. janssen, p. gros
  Keywords: cleavage on pair of basic residues, age-related macular degeneration, regulator of complement activation, alternative pathway, alternative splicing, phosphoprotein, disulfide bond, thioester bond
  
• 2wio.pdb. oxidoreductase 14-may-09 2wio Fe
  Title: structure of the histidine tagged, open cytochrome p450 eryk from s. erythraea
  Author: c. savino, l. c. montemiglio, g. sciara, a. e. miele, s. g. kedrew, s. gianni, b. vallone
  Keywords: antibiotic biosynthesis, metal-binding, oxidoreductase, cytochrome p450, iron, heme, erythromicyn, monooxygenase
  
• 2wk7.pdb. transferase 08-jun-09 2wk7
  Title: structure of apo form of vibrio cholerae cqsa
  Author: n. jahan, j. a. potter, m. a. sheikh, c. h. botting, s. l. shirran, n. j. westwood, g. l. taylor
  Keywords: pyridoxal phosphate, cqsa, cai-1, transferase, autoinducer, quorum-sensing, acyltransferase, aminotransferase
  
• 2wk8.pdb. transferase 08-jun-09 2wk8
  Title: structure of holo form of vibrio cholerae cqsa
  Author: n. jahan, j. a. potter, m. a. sheikh, c. h. botting, s. l. shirran, n. j. westwood, g. l. taylor
  Keywords: pyridoxal phosphate, cqsa, cai-1, transferase, autoinducer, quorum-sensing, acyltransferase, aminotransferase
  
• 2wk9.pdb. transferase 08-jun-09 2wk9
  Title: structure of plp_thr aldimine form of vibrio cholerae cqsa
  Author: n. jahan, j. a. potter, m. a. sheikh, c. h. botting, s. l. shirran, n. j. westwood, g. l. taylor
  Keywords: pyridoxal phosphate, cqsa, cai-1, transferase, autoinducer, quorum-sensing, acyltransferase, aminotransferase
  
• 2wka.pdb. transferase 08-jun-09 2wka Cl
  Title: structure of plp_thr_decanoyl-coa aldimine form of vibrio cholerae cqsa
  Author: n. jahan, j. a. potter, m. a. sheikh, c. h. botting, s. l. shirran, n. j. westwood, g. l. taylor
  Keywords: pyridoxal phosphate, cqsa, cai-1, transferase, autoinducer, quorum-sensing, acyltransferase, aminotransferase
  
• 2wm3.pdb. unknown function 29-jun-09 2wm3 Cl F
  Title: crystal structure of nmra-like family domain containing protein 1 in complex with niflumic acid
  Author: c. bhatia, w. w. yue, f. niesen, e. pilka, e. ugochukwu, p. savitsky, v. hozjan, a. k. roos, p. filippakopoulos, f. von delft, t. heightman, c. arrowsmith, j. weigelt, a. edwards, c. bountra, u. oppermann
  
  
• 2wme.pdb. oxidoreductase 30-jun-09 2wme K
  Title: crystallographic structure of betaine aldehyde dehydrogenase from pseudomonas aeruginosa
  Author: l. gonzalez-segura, e. rudino-pinera, r. a. munoz-clares, e. horjales
  Keywords: nad, nadp complex, oxidoreductase
  
• 2wng.pdb. cell adhesion 09-jul-09 2wng
  Title: complete extracellular structure of human signal regulatory protein (sirp) alpha
  Author: d. hatherley, s. c. graham, k. harlos, d. i. stuart, a. n. barclay
  Keywords: transmembrane, cell adhesion
  
• 2zq1.pdb. hydrolase 03-aug-08 2zq1 Ca
  Title: exploring trypsin s3 pocket
  Author: t. brandt, b. baum, a. heine, g. klebe
  Keywords: calcium, digestion, hydrolase, metal- binding, protease, secreted, serine protease, zymogen
  
• 2zq2.pdb. hydrolase 03-aug-08 2zq2 Ca
  Title: exploring trypsin s3 pocket
  Author: t. brandt, b. baum, a. heine, g. klebe
  Keywords: calcium, digestion, hydrolase, metal- binding, protease, secreted, serine protease, zymogen
  
• 2zxt.pdb. protein transport 07-jan-09 2zxt
  Title: crystal structure of tim40/mia40, a disulfide relay system in mitochondria, solved as mbp fusion protein
  Author: s. kawano, t. momose, n. watanabe, t. endo
  Keywords: transmembrane
  
• 2zxy.pdb. oxygen binding, transport protein 09-jan-09 2zxy Fe
  Title: crystal structure of cytochrome c555 from aquifex aeolicus
  Author: m. obuchi, k. kawahara, d. motooka, s. nakamura, m. yamanaka, t. takeda, s. uchiyama, y. kobayashi, t. ohkubo, y. sambongi
  Keywords: oxygen binding, transport protein
  
• 2zy6.pdb. rna 14-jan-09 2zy6 Cl Mg Ca
  Title: crystal structure of a truncated trna, tphe39a
  Author: i. tanaka, m. yao, y. tanaka, y. kitago, s. ymagata
  
  
• 2zzo.pdb. viral protein/inhibitor 20-feb-09 2zzo
  Title: crystal structure of the complex between gp41 fragment n36 and fusion inhibitor c34/s138a
  Author: t. watabe, h. nakano, t. nakatsu, h. kato, n. fujii
  Keywords: gp41, viral protein/inhibitor complex
  
• 3a3c.pdb. protein transport 11-jun-09 3a3c
  Title: crystal structure of tim40/mia40 fusing mbp, c296s and c298s mutant
  Author: s. kawano, m. naoe, t. momose, n. watanabe, t. endo
  Keywords: transit peptide, translocation, transmembrane
  
• 3a4y.pdb. hydrolase 22-jul-09 3a4y Zn
  Title: crystal structure of h61a mutant ttha0252 from thermus thermophilus hb8
  Author: h. ishikawa, n. nakagawa, s. kuramitsu, s. yokoyama, r. masui, riken structural genomics/proteomics initiative (rsgi)
  Keywords: nuclease, rna-binding, rrna processing, zinc
  
• 3beu.pdb. hydrolase 20-nov-07 3beu Na Ca
  Title: na+-dependent allostery mediates coagulation factor protease active site selectivity
  Author: m. j. page, c. j. carrell, e. di cera
  Keywords: serine protease, hydrolase, zymogen
  
• 3bwz.pdb. structural protein 10-jan-08 3bwz Cl
  Title: crystal structure of the type ii cohesin module from the cellulosome of acetivibrio cellulolyticus with an extended linker conformation
  Author: i. noach, r. lamed, l. j. w. shimon, e. bayer, f. frolow
  Keywords: structural protein
  
• 3cey.pdb. transcription regulator 29-feb-08 3cey
  Title: crystal structure of l3mbtl2
  Author: n. nady, y. guo, p. pan, a. allali-hassani, c. qi, h. zhu, a. dong, f. mackenzie, l. crombet, p. loppnau, i. kozieradzki, m. vedadi, a. m. edwards, j. weigelt, c. bountra, c. h. arrowsmith, a. bochkarev, r. read, j. min, structural genomics consortium (sgc)
  Keywords: transcription regulator
  
• 3cu9.pdb. hydrolase 16-apr-08 3cu9 Ca
  Title: high resolution crystal structure of 1,5-alpha-l-arabinanase from geobacillus stearothermophilus
  Author: a. alhassid, a. ben david, y. shoham, g. shoham
  Keywords: glycosyl hydrolase, high resolution, beta- propeller, geobacillus stearothermophilus
  
• 3cvv.pdb. lyase/dna 20-apr-08 3cvv
  Title: drosophila melanogaster (6-4) photolyase bound to ds dna with a t-t (6-4) photolesion and f0 cofactor
  Author: a. f. glas, m. j. maul, m. j. cryle, t. r. m. barends, s. schneider, e. kaya, i. schlichting, t. carell
  Keywords: lyase/dna complex
  
• 3cwr.pdb. transcription regulator 22-apr-08 3cwr Se
  Title: crystal structure of transcriptional regulator of tetr family (yp_425770.1) from rhodospirillum rubrum atcc 11170 at 1.50 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: transcription regulation, transcription regulator
  
• 3czb.pdb. structural genomics, unknown function 28-apr-08 3czb
  Title: crystal structure of putative transglycosylase from caulobacter crescentus
  Author: u. a. ramagopal, k. chattopadhyay, r. toro, s. wasserman, j. freeman, c. logan, k. bain, t. gheyi, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
  Keywords: unknown function, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc
  
• 3d4a.pdb. hydrolase 14-may-08 3d4a
  Title: crystal structure of ribonuclease sa2 with 3'-gmp obtained by ligand diffusion
  Author: v. bauerova-hlinkova, j. sevcik
  Keywords: mononucleotide, protein-mononucleotide complex, hydrolase
  
• 3d5g.pdb. hydrolase 16-may-08 3d5g
  Title: structure of ribonuclease sa2 complexes with mononucleotides: new aspects of catalytic reaction and substrate recognition
  Author: v. bauerova-hlinkova, r. dvorsky, f. povazanec, j. sevcik
  Keywords: hydrolase
  
• 3d5i.pdb. hydrolase 16-may-08 3d5i
  Title: crystal structure of ribonuclease sa2 with exo-2',3'- cyclophosphorotioate
  Author: v. bauerova-hlinkova, j. sevcik
  Keywords: mononucleotide, protein-mononucleotide complex, exo-2',3'-cyclophosphorotioate, hydrolase
  
• 3d5y.pdb. hydrolase 18-may-08 3d5y Ca
  Title: high resolution crystal structure of 1,5-alpha-arabinanase catalytic mutant (abnbe201a)
  Author: a. alhassid, a. ben david, y. shoham, g. shoham
  Keywords: glycosyl hydrolase, high resolution, beta- propeller, geobacillus stearothermophilus
  
• 3d5z.pdb. hydrolase 18-may-08 3d5z Ca
  Title: crystal structure analysis of 1,5-alpha-arabinanase catalytic mutant (abnbe201a) complexed to arabinotriose
  Author: a. alhassid, a. ben david, y. shoham, g. shoham
  Keywords: glycosyl hydrolase, beta-propeller, geobacillus stearothermophilus
  
• 3d60.pdb. hydrolase 18-may-08 3d60 Ca
  Title: crystal structure analysis of 1,5-alpha-arabinanase catalytic mutant (d27a)
  Author: a. alhassid, a. ben david, y. shoham, g. shoham
  Keywords: glycosyl hydrolase, beta-propeller, geobacillus stearothermophilus
  
• 3d61.pdb. hydrolase 18-may-08 3d61 Ca
  Title: crystal structure analysis of 1,5-alpha-arabinanase catalytic mutant (abnbd147a) complexed to arabinobiose
  Author: a. alhassid, a. ben david, y. shoham, g. shoham
  Keywords: glycosyl hydrolase, beta-propeller, geobacillus stearothermophilus
  
• 3d63.pdb. hydrolase 18-may-08 3d63
  Title: crystal structure of inorganic pyrophosphatase from burkholderia pseudomallei
  Author: seattle structural genomics center for infectious disease (ssgcid)
  Keywords: ssgcid, pyrophosphatase, hydrolase, seattle structural genomics center for infectious disease
  
• 3da8.pdb. transferase 28-may-08 3da8 Mg I
  Title: crystal structure of purn from mycobacterium tuberculosis
  Author: z. zhang, c. j. squire, e. n. baker
  Keywords: purn, structure, transferase
  
• 3dbu.pdb. lyase 02-jun-08 3dbu Zn
  Title: use of carbonic anhydrase ii, ix active-site mimic, for the purpose of screening inhibitors for possible anti-cancer properties
  Author: c. genis, k. h. sippel, n. case, l. govindasamy, m. agbandje-mckenna, r. mckenna
  Keywords: caix mimic inhibitors, acetylation, cytoplasm, disease mutation, lyase, metal- binding, polymorphism, zinc
  
• 3dcj.pdb. transferase 03-jun-08 3dcj Cl Mg
  Title: crystal structure of glycinamide formyltransferase (purn) from mycobacterium tuberculosis in complex with 5-methyl-5, 6,7,8-tetrahydrofolic acid derivative
  Author: z. zhang, c. j. squire, e. n. baker
  Keywords: purn
  
• 3dfn.pdb. lyase 12-jun-08 3dfn
  Title: d33n mutant fructose-1,6-bisphosphate aldolase from rabbit muscle
  Author: m. st-jean, j. sygusch
  Keywords: mutant, acetylation, glycolysis, lyase, phosphoprotein, schiff base
  
• 3dfo.pdb. lyase 12-jun-08 3dfo
  Title: dihydroxyacetone phosphate schiff base and enamine intermediates in d33n mutant fructose-1,6-bisphosphate aldolase from rabbit muscle
  Author: m. st-jean, j. sygusch
  Keywords: mutant, iminium, schiff base, enamine, intermediate, covalent, lyase
  
• 3dfp.pdb. lyase 12-jun-08 3dfp
  Title: phosphate ions in d33n mutant fructose-1,6-bisphosphate aldolase from rabbit muscle
  Author: m. st-jean, j. sygusch
  Keywords: mutant, phosphate, ion, lyase
  
• 3dfq.pdb. lyase 12-jun-08 3dfq
  Title: d33s mutant fructose-1,6-bisphosphate aldolase from rabbit muscle
  Author: m. st-jean, j. sygusch
  Keywords: mutant, acetylation, glycolysis, lyase, phosphoprotein, schiff base
  
• 3dfs.pdb. lyase 12-jun-08 3dfs
  Title: dihydroxyacetone phosphate schiff base intermediate in d33s mutant fructose-1,6-bisphosphate aldolase from rabbit muscle
  Author: m. st-jean, j. sygusch
  Keywords: mutant, iminium, schiff base, intermediate, covalent, acetylation, glycolysis, lyase, phosphoprotein
  
• 3dft.pdb. lyase 12-jun-08 3dft
  Title: phosphate ions in d33s mutant fructose-1,6-bisphosphate aldolase from rabbit muscle
  Author: m. st-jean, j. sygusch
  Keywords: mutant, phosphate, ion, acetylation, glycolysis, lyase, phosphoprotein, schiff base
  
• 3dgy.pdb. hydrolase 16-jun-08 3dgy
  Title: crystal structure of ribonuclease sa2 with guanosine-2'- cyclophosphate
  Author: j. sevcik, v. bauerova-hlinkova
  Keywords: hydrolase, protein-mononucleotide complex, guanosine-2'-monophosphate, mononucleotide
  
• 3dh2.pdb. hydrolase 16-jun-08 3dh2
  Title: crystal structure of ribonuclease sa2 with guanosine-3'- cyclophosphate prepared by cocrystallization
  Author: j. sevcik, v. bauerova-hlinkova
  Keywords: hydrolase, protein-mononucleotide complex, guanosine-3'-monophosphate, mononucleotide, cocrystallization
  
• 3dr0.pdb. electron transport 10-jul-08 3dr0 Fe
  Title: structure of reduced cytochrome c6 from synechococcus sp. pcc 7002
  Author: w. bialek, s. krzywda, m. jaskolski, a. szczepaniak
  Keywords: photosynthesis, cyanobacteria, electron transfer, electron transport, heme, iron, metal-binding, thylakoid, transport
  
• 3dut.pdb. oxygen binding 17-jul-08 3dut Fe
  Title: the high salt (phosphate) crystal structure of deoxy hemoglobin e (glu26lys) at physiological ph (ph 7.35)
  Author: v. n. malashkevich, t. c. balazs, s. c. almo, r. e. hirsch
  Keywords: acetylation, disease mutation, glycation, glycoprotein, heme, iron, metal-binding, oxygen transport, polymorphism, transport, hypotensive agent, pyruvate, s- nitrosylation, vasoactive, oxygen binding
  
• 3dvw.pdb. oxidoreductase 21-jul-08 3dvw
  Title: crystal structure of reduced dsba1 from neisseria meningitidis
  Author: c. lafaye, l. serre
  Keywords: neisseria, dsba, disulfide bond
  
• 3dvx.pdb. oxidoreductase 21-jul-08 3dvx Se
  Title: crystal structure of reduced dsba3 from neisseria meningitidis
  Author: c. lafaye, l. serre
  Keywords: neisseria, dsba, disulfide bond
  
• 3dxw.pdb. isomerase 25-jul-08 3dxw
  Title: the crystal structure of alpha-amino-epsilon-caprolactam racemase from achromobacter obae complexed with epsilon caprolactam
  Author: s. okazaki, a. suzuki, h. komeda, y. asano, t. yamane
  Keywords: pyridoxal-5'-phosphate dependent racemase, pyridoxal phosphate, isomerase
  
• 3dyb.pdb. hydrolase 25-jul-08 3dyb Ca
  Title: proteinase k- digalacturonic acid complex
  Author: s. b. larson, j. s. day, a. mcpherson, r. cudney, c. nguyen, center for high-throughput structural biology (chtsb)
  Keywords: serine protease, zymogen
  
• 3e0u.pdb. oxidoreductase 01-aug-08 3e0u
  Title: crystal structure of t. cruzi gpx1
  Author: s. h. patel, s. hussain, r. harris, p. driscoll, s. djordjevic
  Keywords: oxidoreductase, peroxidase
  
• 3e1g.pdb. hydrolase 04-aug-08 3e1g
  Title: snapshots of esterase d from lactobacillus rhamnosus: insights into a rotation driven catalytic mechanism
  Author: m. d. bennett, m. -l. delabre, r. holland, g. e. norris
  Keywords: mechanism, catalytic triad, rotation, esterase
  
• 3e2k.pdb. hydrolase/hydrolase inhibitor 05-aug-08 3e2k
  Title: crystal structure of the kpc-2 beta-lactamase/beta-lactamase inhibitor protein (blip)
  Author: m. s. hanes, k. m. jude, j. m. berger, r. a. bonomo, t. m. handel
  Keywords: beta-lactamase inhibitor protein, protein- protein complex, blip, kpc-2, antibiotic resistance, hydrolase, plasmid, secreted, hydrolase/hydrolase inhibitor complex
  
• 3e2l.pdb. hydrolase/hydrolase inhibitor 05-aug-08 3e2l B
  Title: crystal structure of the kpc-2 beta-lactamase/beta-lactamase inhibitor protein (blip)
  Author: m. s. hanes, k. m. jude, j. m. berger, j. f. kirsch, r. a. bonomo, t. m. handel
  Keywords: beta-lactamase inhibitor protein, protein- protein complex, blip, kpc-2, antibiotic resistance, hydrolase, plasmid, secreted, hydrolase/hydrolase inhibitor complex
  
• 3ea6.pdb. toxin 24-aug-08 3ea6 I Zn
  Title: atomic resolution of crystal structure of sek
  Author: k. shi, m. huseby, p. m. schlievert, d. h. ohlendorf, c. a. earhart
  Keywords: superantigen
  
• 3eax.pdb. hydrolase 26-aug-08 3eax
  Title: crystal structure ptp1b complex with small molecule compound lzp-6
  Author: z. -y. zhang, s. liu, l. -f. zhang, x. yu, t. xue, a. m. gunawan, y. -q. long
  Keywords: ptp1b, inhibitor, crystal structure, acetylation, endoplasmic reticulum, hydrolase, membrane, oxidation, phosphoprotein, polymorphism, protein phosphatase
  
• 3eb1.pdb. hydrolase 26-aug-08 3eb1
  Title: crystal structure ptp1b complex with small molecule inhibitor lzp-25
  Author: s. liu, l. -f. zheng, l. wu, x. yu, t. xue, a. m. gunawan, y. -q. long, z. -y zhang
  Keywords: ptp1b, inhibitor, crystal structure, acetylation, endoplasmic reticulum, hydrolase, membrane, oxidation, phosphoprotein, polymorphism, protein phosphatase
  
• 3ehq.pdb. signaling protein 14-sep-08 3ehq Se
  Title: crystal structure of human osteoclast stimulating factor
  Author: s. tong, h. zhou, y. gao, z. zhu, x. zhang, m. teng, l. niu
  Keywords: helix-turn-helix, sh3, ankyrin repeat, ank repeat, cytoplasm, phosphoprotein, polymorphism, sh3 domain, signaling protein
  
• 3ehr.pdb. signaling protein 14-sep-08 3ehr Se
  Title: crystal structure of human osteoclast stimulating factor
  Author: s. tong, h. zhou, y. gao, z. zhu, x. zhang, m. teng, l. niu
  Keywords: helix-turn-helix, sh3, ankyrin repeat, signaling protein, ank repeat, cytoplasm, phosphoprotein, polymorphism, sh3 domain
  
• 3emv.pdb. transferase 25-sep-08 3emv
  Title: crystal structure of plasmodium vivax pnp with sulphate
  Author: a. chaikuad, r. l. brady
  Keywords: binary complex, purine nucleoside phosphorylase, uridine phosphorylase, putative
  
• 3enz.pdb. transferase 26-sep-08 3enz Na As
  Title: arsenolytic structure of plasmodium falciparum purine nucleoside phosphorylase with hypoxanthine, ribose and arsenate ion
  Author: a. chaikuad, r. l. brady
  Keywords: catalytically-relevant arsenolytic- intermediate-state complex, glycosyltransferase
  
• 3ez8.pdb. hydrolase 22-oct-08 3ez8 Zn Ca
  Title: crystal structure of endoglucanase cel9a from the thermoacidophilic alicyclobacillus acidocaldarius
  Author: j. h. pereira, r. sapra, b. simmons, p. d. adams
  Keywords: (alpha/alpha)6 barrel, glycosidase, hydrolase
  
• 3f45.pdb. calcium binding protein 31-oct-08 3f45 Ca
  Title: structure of the r75a mutant of rat alpha-parvalbumin
  Author: f. hoh, a. padilla
  Keywords: ef-hand, acetylation, calcium, muscle protein, phosphoprotein
  
• 3f70.pdb. transcription regulator 07-nov-08 3f70
  Title: crystal structure of l3mbtl2-h4k20me1 complex
  Author: y. guo, c. qi, a. allali-hassani, p. pan, h. zhu, a. dong, f. mackenzie, l. crombet, p. loppnau, i. kozieradzki, m. vedadi, a. m. edwards, j. weigelt, c. bountra, c. h. arrowsmith, a. botchkarev, r. read, j. min, structural genomics consortium (sgc)
  Keywords: alternative splicing, phosphoprotein
  
• 3f9p.pdb. oxidoreductase 14-nov-08 3f9p Cl Fe Ca
  Title: crystal structure of myeloperoxidase from human leukocytes
  Author: x. carpena, i. fita, c. obinger
  Keywords: oxidation, oxidoreductase, polymorphism, disulfide bond, heme, peroxidase
  
• 3fjq.pdb. transferase 15-dec-08 3fjq Mn
  Title: crystal structure of camp-dependent protein kinase catalytic subunit alpha in complex with peptide inhibitor pki alpha (6-25)
  Author: c. kim
  Keywords: atp- binding, camp, cytoplasm, kinase, lipoprotein, myristate, nucleotide-binding, nucleus, phosphoprotein, serine/threonine-protein kinase, transferase, protein kinase inhibitor
  
• 3fna.pdb. isomerase 23-dec-08 3fna Se
  Title: crystal structure of the cbs pair of possible d-arabinose 5- phosphate isomerase yrbh from escherichia coli cft073
  Author: m. e. cuff, l. bigelow, k. buck, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: structural genomics, d-arabinose 5-phosphate isomerase, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, cbs domain, isomerase, lipopolysaccharide biosynthesis
  
• 3fq4.pdb. cell adhesion 07-jan-09 3fq4
  Title: crystal structure of the calx-beta domain of integrin beta4
  Author: n. alonso-garcia, a. ingles-prieto, j. m. de pereda
  Keywords: integrin, cell adhesion, alternative splicing, disease mutation, epidermolysis bullosa, glycoprotein, membrane, phosphoprotein, polymorphism, receptor, transmembrane
  
• 3fq9.pdb. hormone 07-jan-09 3fq9 Zn
  Title: design of an insulin analog with enhanced receptor-binding selectivity. rationale, structure, and therapeutic implications
  Author: m. zhao, z. l. wan, l. whittaker, b. xu, n. phillips, p. katsoyannis, j. whittaker, m. a. weiss
  Keywords: pharmaceutical, secreted
  
• 3fso.pdb. cell adhesion 11-jan-09 3fso
  Title: crystal structure of the calx-beta domain of integrin beta4, calcium soak
  Author: n. alonso-garcia, a. ingles-prieto, j. m. de pereda
  Keywords: integrin, cell adhesion, alternative splicing, disease mutation, epidermolysis bullosa, glycoprotein, membrane, phosphoprotein, polymorphism, receptor, transmembrane
  
• 3fvh.pdb. cell cycle, peptide binding protein 15-jan-09 3fvh
  Title: polo-like kinase 1 polo box domain in complex with ac- lhspta-nh2 peptide
  Author: d. c. lim, m. b. yaffe
  Keywords: transferase, peptide binding protein
  
• 3fy8.pdb. oxidoreductase 22-jan-09 3fy8
  Title: crystal structure of staph. aureus dhfr complexed with nadph and ar-101
  Author: c. oefner, g. e. dale
  Keywords: nadp, one-carbon metabolism, oxidoreductase
  
• 3fy9.pdb. oxidoreductase 22-jan-09 3fy9
  Title: staph. aureus dhfr f98y complexed with ar-102
  Author: c. oefner
  Keywords: ar-102, oxidoreductase, nadp, one-carbon metabolism
  
• 3fyv.pdb. oxidoreductase 23-jan-09 3fyv
  Title: staph. aureus dhfr complexed with nadph and ar-102
  Author: c. oefner
  Keywords: staph.aureus, ar-102, oxidoreductase, nadp, one-carbon metabolism
  
• 3fyw.pdb. oxidoreductase 23-jan-09 3fyw
  Title: staph. aureus dhfr complexed with nadph and ar-101
  Author: c. oefner
  Keywords: ar-101, oxidoreductase, nadp, one-carbon metabolism
  
• 3g04.pdb. immune system 27-jan-09 3g04 Zn
  Title: crystal structure of the tsh receptor in complex with a thyroid-stimulating autoantibody
  Author: j. sanders, d. y. chirgadze, p. sanders, s. baker, a. sullivan, a. bhardwaja, j. bolton, m. reeve, n. nakatake, m. evans, t. richards, m. powell, r. n. miguel, t. l. blundell, j. furmaniak, b. r. smith
  Keywords: gpcr, thyroid, graves' disease, autoimmunity, receptor-autoantibody complex, immune system
  
• 3g49.pdb. oxidoreductase/oxidoreductase inhibitor 03-feb-09 3g49 Cl
  Title: n-(pyridin-2-yl) arylsulfonamide inhibitors of 11b- hydroxysteroid dehydrogenase type 1: discovery of pf-915275
  Author: t. a. pauly
  Keywords: inhibited, endoplasmic reticulum, glycoprotein, lipid metabolism, membrane, nadp, oxidoreductase, signal-anchor, steroid metabolism, transmembrane, oxidoreductase/oxidoreductase inhibitor complex
  
• 3gef.pdb. structural protein 25-feb-09 3gef
  Title: crystal structure of the r482w mutant of lamin a/c
  Author: e. magracheva, s. kozlov, c. stuart, a. wlodawer, a. zdanov
  Keywords: phosphoprotein, prenylation, structural protein
  
• 3gi1.pdb. metal transport 04-mar-09 3gi1 Zn
  Title: crystal structure of the laminin-binding protein lbp of streptococcus pyogenes
  Author: c. linke, t. t. caradoc-davies, p. g. young, t. proft, e. n. baker
  Keywords: metal-binding, helical backbone, alpha/beta domains, laminin-binding protein, lbp, transport, metal transport
  
• 3gio.pdb. dna binding protein 05-mar-09 3gio Se
  Title: crystal structure of the tnf-alpha inducing protein (tip alpha) from helicobacter pylori
  Author: j. y. jang, h. j. yoon, j. y. yoon, h. s. kim, s. j. lee, k. h. kim, d. j. kim, b. g. han, b. i. lee, s. jang, s. w. suh
  Keywords: four-helix bundle, loop, dna binding protein
  
• 3gj0.pdb. transport protein 07-mar-09 3gj0 Mg
  Title: crystal structure of human rangdp
  Author: j. r. partridge, t. u. schwartz
  Keywords: gdp, acetylation, cytoplasm, gtp-binding, host- virus interaction, nucleotide-binding, nucleus, phosphoprotein, polymorphism, protein transport, transport, transport protein
  
• 3gj3.pdb. transport protein 07-mar-09 3gj3 Mg Zn
  Title: crystal structure of human rangdp-nup153znf2 complex
  Author: j. r. partridge, t. u. schwartz
  Keywords: transport, ubl conjugation, dna-binding, metal-binding, mrna transport, nuclear pore complex, translocation, zinc, zinc- finger, transport protein
  
• 3gj4.pdb. transport protein 07-mar-09 3gj4 Mg Zn
  Title: crystal structure of human rangdp-nup153znf3 complex
  Author: j. r. partridge, t. u. schwartz
  Keywords: transport, ubl conjugation, dna-binding, metal-binding, mrna transport, nuclear pore complex, translocation, zinc, zinc- finger, transport protein
  
• 3gj5.pdb. transport protein 07-mar-09 3gj5 Mg Zn
  Title: crystal structure of human rangdp-nup153znf4 complex
  Author: j. r. partridge, t. u. schwartz
  Keywords: transport, ubl conjugation, dna-binding, metal-binding, mrna transport, nuclear pore complex, translocation, zinc, zinc- finger, transport protein
  
• 3gj6.pdb. transport protein 07-mar-09 3gj6 Mg Zn
  Title: crystal structure of human rangdp-nup153znf1 complex
  Author: j. r. partridge, t. u. schwartz
  Keywords: transport, ubl conjugation, dna-binding, metal-binding, mrna transport, nuclear pore complex, translocation, zinc, zinc- finger, transport protein
  
• 3gj7.pdb. transport protein 07-mar-09 3gj7 Mg Zn
  Title: crystal structure of human rangdp-nup153znf12 complex
  Author: j. r. partridge, t. u. schwartz
  Keywords: transport, ubl conjugation, dna-binding, metal-binding, mrna transport, nuclear pore complex, translocation, zinc, zinc- finger, transport protein
  
• 3gj8.pdb. transport protein 07-mar-09 3gj8 Mg Zn
  Title: crystal structure of human rangdp-nup153znf34 complex
  Author: j. r. partridge, t. u. schwartz
  Keywords: transport, ubl conjugation, dna-binding, metal-binding, mrna transport, nuclear pore complex, translocation, zinc, zinc- finger, transport protein
  
• 3gjo.pdb. structural protein 09-mar-09 3gjo
  Title: crystal structure of cytoskeletal protein complex
  Author: s. honnappa, m. o. steinmetz
  Keywords: actin-binding calcium, structural protein, microtubule, actin-binding, calcium
  
• 3gkw.pdb. immune system, antitumor protein 11-mar-09 3gkw
  Title: crystal structure of the fab fragment of nimotuzumab. an anti-epidermal growth factor receptor antibody
  Author: a. talavera, r. friemann, c. martinez-fleites, e. moreno, u. krengel
  Keywords: displaced strictly conserved trp 103 following kabat numbering, immune system, antitumor protein
  
• 3gl0.pdb. oxidoreductase 11-mar-09 3gl0 Cl Fe
  Title: crystal structure of dicamba monooxygenase bound to 3,6 dichlorosalicylic acid (dcsa)
  Author: m. a. wilson, r. dumitru, w. z. jiang, d. p. weeks
  Keywords: non-heme mononuclear iron, oxygenase, oxidoreductase
  
• 3gl2.pdb. oxidoreductase 11-mar-09 3gl2 Cl Fe
  Title: crystal structure of dicamba monooxygenase bound to dicamba
  Author: m. a. wilson, r. dumitru, w. z. jiang, d. p. weeks
  Keywords: non-heme mononuclear iron, oxygenase, oxidoreductase
  
• 3gm6.pdb. oxidoreductase 13-mar-09 3gm6 Fe Ca
  Title: structure of the thioalkalivibrio nitratireducens cytochrome c nitrite reductase in complex with phosphate
  Author: a. a. trofimov, k. m. polyakov, k. m. boyko, a. a. filimonenkov, p. v. dorovatovsky, t. v. tikhonova, v. o. popov
  Keywords: eight hemes c, oxidoreductase
  
• 3gqt.pdb. oxidoreductase 24-mar-09 3gqt
  Title: crystal structure of glutaryl-coa dehydrogenase from burkholderia pseudomallei with fragment (1,4-dimethyl-1,2, 3,4-tetrahydroquinoxalin-6-yl)methylamine
  Author: seattle structural genomics center for infectious disease (ssgcid)
  Keywords: seattle structural genomics center for infectious disease, glutaryl-coa dehydrogenase, bupsa.00027.a, fragment crystallography, fragments of life, oxidoreductase
  
• 3gsn.pdb. immune system 27-mar-09 3gsn Cl
  Title: crystal structure of the public ra14 tcr in complex with the hcmv dominant nlv/hla-a2 epitope
  Author: s. gras, x. saulquin, j. -b. reiser, e. debeaupuis, k. echasserieau, a. kissenpfennig, f. legoux, a. chouquet, m. le gorrec, p. machillot, b. neveu, n. thielens, b. malissen, m. bonneville, d. housset
  Keywords: immune system
  
• 3gso.pdb. immune system 27-mar-09 3gso
  Title: crystal structure of the binary complex between hla-a2 and hcmv nlv peptide
  Author: s. gras, x. saulquin, j. -b. reiser, e. debeaupuis, k. echasserieau, a. kissenpfennig, f. legoux, a. chouquet, m. le gorrec, p. machillot, b. neveu, n. thielens, b. malissen, m. bonneville, d. housset
  Keywords: immune system
  
• 3gsq.pdb. immune system 27-mar-09 3gsq
  Title: crystal structure of the binary complex between hla-a2 and hcmv nlv-m5s peptide variant
  Author: j. -b. reiser, x. saulquin, s. gras, e. debeaupuis, k. echasserieau, a. kissenpfennig, f. legoux, a. chouquet, m. le gorrec, p. machillot, b. neveu, n. thielens, b. malissen, m. bonneville, d. housset
  Keywords: immune system
  
• 3gsr.pdb. immune system 27-mar-09 3gsr
  Title: crystal structure of the binary complex between hla-a2 and hcmv nlv-m5v peptide variant
  Author: j. -b. reiser, x. saulquin, s. gras, e. debeaupuis, k. echasserieau, a. kissenpfennig, f. legoux, a. chouquet, m. le gorrec, p. machillot, b. neveu, n. thielens, b. malissen, m. bonneville, d. housset
  Keywords: immune system
  
• 3gsu.pdb. immune system 27-mar-09 3gsu
  Title: crystal structure of the binary complex between hla-a2 and hcmv nlv-m5t peptide variant
  Author: j. -b. reiser, x. saulquin, s. gras, e. debeaupuis, k. echasserieau, a. kissenpfennig, f. legoux, a. chouquet, m. le gorrec, p. machillot, b. neveu, n. thielens, b. malissen, m. bonneville, d. housset
  Keywords: immune system
  
• 3gsv.pdb. immune system 27-mar-09 3gsv
  Title: crystal structure of the binary complex between hla-a2 and hcmv nlv-m5q peptide variant
  Author: j. -b. reiser, x. saulquin, s. gras, e. debeaupuis, k. echasserieau, a. kissenpfennig, f. legoux, a. chouquet, m. le gorrec, p. machillot, b. neveu, n. thielens, b. malissen, m. bonneville, d. housset
  Keywords: immune system
  
• 3gsw.pdb. immune system 27-mar-09 3gsw
  Title: crystal structure of the binary complex between hla-a2 and hcmv nlv-t8a peptide variant
  Author: j. -b. reiser, x. saulquin, s. gras, e. debeaupuis, k. echasserieau, a. kissenpfennig, f. legoux, a. chouquet, m. le gorrec, p. machillot, b. neveu, n. thielens, b. malissen, m. bonneville, d. housset
  Keywords: immune system
  
• 3gsx.pdb. immune system 27-mar-09 3gsx
  Title: crystal structure of the binary complex between hla-a2 and hcmv nlv-t8v peptide variant
  Author: j. -b. reiser, x. saulquin, s. gras, e. debeaupuis, k. echasserieau, a. kissenpfennig, f. legoux, a. chouquet, m. le gorrec, p. machillot, b. neveu, n. thielens, b. malissen, m. bonneville, d. housset
  Keywords: immune system
  
• 3gt8.pdb. transferase 27-mar-09 3gt8 Mg
  Title: crystal structure of the inactive egfr kinase domain in complex with amp-pnp
  Author: n. jura, n. f. endres, k. engel, s. deindl, r. das, m. h. lamers, d. e. wemmer, x. zhang, j. kuriyan
  Keywords: phosphoprotein, polymorphism, receptor, secreted, transferase, transmembrane, tyrosine- protein kinase, ubl conjugation
  
• 3gyg.pdb. hydrolase 03-apr-09 3gyg Mg Se
  Title: crystal structure of yhjk (haloacid dehalogenase-like hydrolase protein) from bacillus subtilis
  Author: b. nocek, a. stein, r. wu, r. jedrzejczak, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: pf08282, mcsg, psi-2, haloacid dehalogenase-like hydrolase, structural genomics, protein structure initiative, midwest center for structural genomics, antibiotic biosynthesis, hydrolase
  
• 3gz0.pdb. lyase 06-apr-09 3gz0 Zn
  Title: apo-human carbonic anhydrase ii revisited: implications of the loss of a metal in protein structure, stability and solvent network
  Author: b. s. avvaru, r. mckenna
  Keywords: carbonic anhydrase, acetylation, cytoplasm, disease mutation, lyase, metal-binding, polymorphism, zinc
  
• 3h3x.pdb. oxidoreductase 17-apr-09 3h3x Mg Fe Ni
  Title: structure of the v74m large subunit mutant of ni-fe hydrogenase in an oxidized state
  Author: a. volbeda, n. martinez, l. martin, j. c. fontecilla-camps
  Keywords: nickel, iron, 3fe-4s, 4fe- 4s, oxidoreductase, iron-sulfur, metal-binding, periplasm
  
• 3h6a.pdb. cell adhesion 23-apr-09 3h6a
  Title: structure of the calx-beta domain of integrin beta4 crystallized in the presence of calcium
  Author: n. alonso-garcia, a. ingles-prieto, j. m. de pereda
  Keywords: integrin, cell adhesion, epidermolysis bullosa, glycoprotein, membrane, receptor, transmembrane, alternative splicing, disease mutation, disulfide bond, phosphoprotein, polymorphism
  
• 3h7r.pdb. oxidoreductase 28-apr-09 3h7r
  Title: crystal structure of the plant stress-response enzyme akr4c8
  Author: s. a. white, p. j. simpson, j. p. ride
  Keywords: aldo-keto reductase, nadp, drought tolerance, oxidoreductase
  
• 3h7u.pdb. oxidoreductase 28-apr-09 3h7u
  Title: crystal structure of the plant stress-response enzyme akr4c9
  Author: s. a. white, p. j. simpson, j. p. ride
  Keywords: aldo-keto reductase, nadp, drought tolerance, oxidoreductase
  
• 3ha6.pdb. transferase 01-may-09 3ha6 F
  Title: crystal structure of aurora a in complex with tpx2 and compound 10
  Author: b. zhao, m. a. clark
  Keywords: serine/threonine-protein kinase, cofactor, tpx2, inhibitor, phosphorylation, atp-binding, cell cycle, nucleotide-binding, phosphoprotein, polymorphism, transferase, nucleus, kinase
  
• 3ha8.pdb. transferase 01-may-09 3ha8
  Title: the complex structure of the map kinase p38/compound 14b
  Author: b. zhao, m. a. clark
  Keywords: serine/threonine-protein kinase
  
• 3hb2.pdb. hydrolase 04-may-09 3hb2 Cl Zn Ca
  Title: prtc methionine mutants: m226i
  Author: a. e. oberholzer, m. bumann, t. hege, s. russo, u. baumann
  Keywords: beta roll, zinc, calcium, hydrolase, metal-binding, metalloprotease, protease, secreted, zymogen
  
• 3hc0.pdb. immune system 05-may-09 3hc0
  Title: bha10 igg1 wild-type fab - antibody directed at human ltbr
  Author: j. w. arndt, j. l. jordan, a. lugovskoy, d. wang
  Keywords: bha10, immune system
  
• 3hc3.pdb. immune system 05-may-09 3hc3 Zn
  Title: bha10 igg1 fab double mutant variant - antibody directed at human ltbr
  Author: j. w. arndt, j. l. jordan, a. lugovskoy, d. wang
  Keywords: bha10, immune system
  
• 3hc4.pdb. immune system 05-may-09 3hc4 Zn
  Title: bha10 igg1 fab quadruple mutant variant - antibody directed at human ltbr
  Author: j. w. arndt, j. l. jordan, a. lugovskoy, d. wang
  Keywords: bha10, immune system
  
• 3hh2.pdb. signaling protein/cytokine 14-may-09 3hh2
  Title: crystal structure of the myostatin:follistatin 288 complex
  Author: j. n. cash, t. b. thompson
  Keywords: alternative splicing, polymorphism, signaling protein/cytokine complex
  
• 3hia.pdb. choline-binding protein 19-may-09 3hia
  Title: crystal structure of the choline binding domain of spr1274 in streptococcus pneumoniae
  Author: z. -y. zhang, w. -z. li, y. -l. jiang, r. bao, c. -z. zhou, y. -x. chen
  Keywords: choline-binding protein
  
• 3hk0.pdb. signaling protein 22-may-09 3hk0
  Title: crystal structure of the ra and ph domains of grb10
  Author: s. r. hubbard, r. s. depetris, j. wu
  Keywords: ra, ph, ras-associating, pleckstrin-homology, adapter protein, alternative splicing, phosphoprotein, polymorphism, sh2 domain, signaling protein
  
• 3hlk.pdb. hydrolase 27-may-09 3hlk Se
  Title: crystal structure of human mitochondrial acyl-coa thioesterase (acot2)
  Author: c. r. mandel, b. tweel, l. tong
  Keywords: alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase, transit peptide
  
• 3hpg.pdb. transferase 04-jun-09 3hpg Zn
  Title: visna virus integrase (residues 1-219) in complex with ledgf ibd: examples of open integrase dimer-dimer interfaces
  Author: s. hare, a. labeja, p. cherepanov
  Keywords: host-virus interaction, transcription, transcription regulation, zinc binding, hhcc motif, viral protein, recombination
  
• 3hph.pdb. transferase 04-jun-09 3hph Zn
  Title: closed tetramer of visna virus integrase (residues 1-219) in complex with ledgf ibd
  Author: s. hare, j. wang, p. cherepanov
  Keywords: host-virus interaction, transcription, transcription regulation, zinc binding, hhcc motif, viral protein, recombination
  
• 3hqw.pdb. hydrolase/hydrolase inhibitor 08-jun-09 3hqw Mg Zn
  Title: discovery of novel inhibitors of pde10a
  Author: j. pandit, e. s. marr
  Keywords: allosteric enzyme, alternative splicing, camp, camp-binding, cgmp, cgmp-binding, cytoplasm, hydrolase, magnesium, metal- binding, nucleotide-binding, zinc, hydrolase/hydrolase inhibitor complex
  
• 3hqy.pdb. hydrolase/hydrolase inhibitor 08-jun-09 3hqy Mg Zn
  Title: discovery of novel inhibitors of pde10a
  Author: j. pandit, e. s. marr
  Keywords: allosteric enzyme, alternative splicing, camp, camp-binding, cgmp, cgmp-binding, cytoplasm, hydrolase, magnesium, metal- binding, nucleotide-binding, zinc, hydrolase/hydrolase inhibitor complex
  
• 3hqz.pdb. hydrolase/hydrolase inhibitor 08-jun-09 3hqz Mg Zn
  Title: discovery of novel inhibitors of pde10a
  Author: j. pandit, e. s. marr
  Keywords: allosteric enzyme, alternative splicing, camp, camp-binding, cgmp, cgmp-binding, cytoplasm, hydrolase, magnesium, metal- binding, nucleotide-binding, zinc, hydrolase/hydrolase inhibitor complex
  
• 3hr1.pdb. hydrolase/hydrolase inhibitor 08-jun-09 3hr1 Mg Zn
  Title: discovery of novel inhibitors of pde10a
  Author: j. pandit, e. s. marr
  Keywords: hydrolase/hydrolase inhibitor complex
  
• 3hrp.pdb. structural genomics, unknown function 09-jun-09 3hrp Se
  Title: crystal structure of structural genomics protein of unknown function (np_812590.1) from bacteriodes thetaiotaomicron vpi-5482 at 1.70 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: structural genomics protein of unknown function, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, unknown function
  
• 3hvc.pdb. transferase 15-jun-09 3hvc F
  Title: crystal structure of human p38alpha map kinase
  Author: j. j. perry, j. a. tainer
  Keywords: map kinase, serine/threonine-protein kinase, p38, isoform-2, alternative splicing, atp-binding, cytoplasm, kinase, nucleotide-binding, nucleus, phosphoprotein, polymorphism
  
• 3hvl.pdb. transcription, transferase 16-jun-09 3hvl
  Title: tethered pxr-lbd/src-1p complexed with sr-12813
  Author: c. a. lesburg, w. wang, w. w. prosise, j. chen, s. s. taremi, h. v. le, v. madison, x. cui, a. thomas, k. c. cheng
  Keywords: transferase
  
• 3hvo.pdb. transferase 16-jun-09 3hvo Br
  Title: structure of the genotype 2b hcv polymerase bound to a nni
  Author: e. h. rydberg, a. carfi
  Keywords: atp-binding, hydrolase, metal-binding, multifunctional enzyme, nucleotide-binding, nucleotidyltransferase, rna replication, rna-binding, rna- directed rna polymerase
  
• 3i3n.pdb. protein binding 30-jun-09 3i3n Cl Se
  Title: crystal structure of the btb-back domains of human klhl11
  Author: j. murray, c. d. o. cooper, t. krojer, p. mahajan, e. salah, t. keates, p. savitsky, a. c. w. pike, a. roos, j. muniz, f. von delft, c. bountra, c. h. arrowsmith, j. weigelt, a. edwards, s. knapp, a. bullock, structural genomics consortium (sgc)
  Keywords: btb, klhl11a, sgc, structural genomics consortium, kelch repeat, secreted, protein binding
  
• 3i3o.pdb. oxidoreductase 30-jun-09 3i3o Cl Mg As
  Title: 2.06 angstrom resolution crystal structure of a short chain dehydrogenase from bacillus anthracis str. 'ames ancestor' in complex with nad-acetone
  Author: a. s. halavaty, g. minasov, t. skarina, o. onopriyenko, s. peterson, a. savchenko, w. f. anderson, center for structural genomics of infectious diseases (csgid)
  Keywords: structural genomics, infectious diseases, center for structural genomics of infectious diseases, oxidoreductase, csgid
  
• 3i5d.pdb. transport protein 05-jul-09 3i5d
  Title: crystal structure of the atp-gated p2x4 ion channel in the closed, apo state at 3.5 angstroms (r3)
  Author: t. kawate, j. c. michel, e. gouaux
  Keywords: purinergic receptor, ion channel, closed state, apo state, ion transport, ionic channel, receptor, transmembrane, transport, transport protein
  
• 3i5f.pdb. contractile protein 05-jul-09 3i5f Mg
  Title: crystal structure of squid mg.adp myosin s1
  Author: y. yang, s. gourinath, m. kovacs, l. nyitray, r. reutzel, d. m. himmel, e. o'neall-hennessey, l. reshetnikova, a. g. szent-gyorgyi, j. h. brown, c. cohen
  Keywords: post-rigor state, mg.adp, myosin ii s1, contractile protein, atp-binding, actin-binding, coiled coil, motor protein, muscle protein, myosin, nucleotide-binding, thick filament, calcium
  
• 3i5g.pdb. contractile protein 05-jul-09 3i5g Ca
  Title: crystal structure of rigor-like squid myosin s1
  Author: y. yang, s. gourinath, m. kovacs, l. nyitray, r. reutzel, d. m. himmel, e. o'neall-hennessey, l. reshetnikova, a. g. szent-gyorgyi, j. h. brown, c. cohen
  Keywords: squid, muscle myosin,, contractile protein, x- ray diffraction
  
• 3i5h.pdb. contractile protein 05-jul-09 3i5h Ca
  Title: the crystal structure of rigor like squid myosin s1 in the absence of nucleotide
  Author: y. yang, s. gourinath, m. kovacs, l. nyitray, r. reutzel, d. m. himmel, e. o'neall-hennessey, l. reshetnikova, a. g. szent-gyorgyi, j. h. brown, c. cohen
  Keywords: rigor-like, nucleotide free, myosin s1, contractile protein
  
• 3i5i.pdb. contractile protein 05-jul-09 3i5i Ca
  Title: the crystal structure of squid myosin s1 in the presence of so4 2-
  Author: y. yang, s. gourinath, m. kovacs, l. nyitray, r. reutzel, d. m. himmel, e. o'neall-hennessey, l. reshetnikova, a. g. szent-gyorgyi, j. h. brown, c. cohen
  Keywords: rigor-like, nucleotide free, myosin s1, contractile protein
  
• 3i7w.pdb. hydrolase 09-jul-09 3i7w Cl
  Title: high pressure structure of wild-type rnase a (0.67 gpa)
  Author: k. lewinski, k. kurpiewska, k. dziubek, a. katrusiak, j. font, m. ribo, m. vilanova
  Keywords: rnase a, high pressure, disulfide bond, endonuclease, glycation, glycoprotein, hydrolase, nuclease, secreted
  
• 3i7x.pdb. hydrolase 09-jul-09 3i7x Cl
  Title: high pressure structure of i106a rnase a variant (0.35 gpa)
  Author: k. lewinski, k. kurpiewska, k. dziubek, a. katrusiak, j. font, m. ribo, m. vilanova
  Keywords: rnase a, high pressure, disulfide bond, endonuclease, glycation, glycoprotein, hydrolase, nuclease, secreted
  
• 3i7y.pdb. hydrolase 09-jul-09 3i7y Cl
  Title: high pressure structure of i106a variant of rnase a (0.48 gpa)
  Author: k. lewinski, k. kurpiewska, k. dziubek, a. katrusiak, j. font, m. ribo, m. vilanova
  Keywords: rnase a, high pressure, disulfide bond, endonuclease, glycation, glycoprotein, hydrolase, nuclease, secreted
  
• 3i8b.pdb. transferase 09-jul-09 3i8b Mg Se
  Title: the crystal structure of xylulose kinase from bifidobacterium adolescentis
  Author: z. zhang, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
  Keywords: new york sgx research center for structural genomics, nysgxrc
  
• 3ib5.pdb. hormone 15-jul-09 3ib5 Mg Se
  Title: crystal structure of sex pheromone precursor (yp_536235.1) from lactobacillus salivarius subsp. salivarius ucc118 at 1.35 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: sex pheromone precursor, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, lipoprotein, cams sex pheromone cam373 precursor, hormone
  
• 3ic6.pdb. structural genomics, unknown function 17-jul-09 3ic6 Se
  Title: crystal structure of putative methylase family protein from neisseria gonorrhoeae
  Author: c. chang, n. marshall, g. cobb, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: putative methylase family protein, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, methyltransferase, transferase, unknown function
  
• 3icl.pdb. structural genomics, unknown function 17-jul-09 3icl Se
  Title: x-ray structure of protein (eal/ggdef domain protein) from m.capsulatus, northeast structural genomics consortium target mcr174c
  Author: a. kuzin, y. chen, j. seetharaman, m. mao, r. xiao, c. ciccosanti, e. l. foote, h. wang, j. k. everett, r. nair, t. b. acton, b. rost, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
  Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics, consortium, nesg, mcr174c, northeast structural genomics consortium, unknown function
  
• 3idf.pdb. structural genomics, unknown function 21-jul-09 3idf
  Title: the crystal structure of a usp-like protein from wolinella succinogenes to 2.0a
  Author: a. j. stein, a. sather, g. shackelford, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: universal, stress, wolinella, succinogenes, psi, mcsg, structural genomics, midwest center for structural genomics, protein structure initiative, unknown function
  
• 3idu.pdb. structural genomics, unknown function 21-jul-09 3idu Mn Se
  Title: crystal structure of the cardb domain of the pf1109 protein in complex with di-metal ions from pyrococcus furiosus, northeast structural genomics consortium target pfr193a
  Author: f. forouhar, h. neely, j. seetharaman, m. mao, r. xiao, c. ciccosanti, d. lee, j. k. everett, r. nair, t. b. acton, b. rost, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
  Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, unknown function
  
• 3idz.pdb. hydrolase 22-jul-09 3idz Zn
  Title: crystal structure of s378q mutant ttha0252 from thermus thermophilus hb8
  Author: h. ishikawa, n. nakagawa, s. kuramitsu, s. yokoyama, r. masui, riken structural genomics/proteomics initiative (rsgi)
  Keywords: nuclease, rna-binding, rrna processing, zinc
  
• 3ie0.pdb. hydrolase 22-jul-09 3ie0 Zn
  Title: crystal structure of s378y mutant ttha0252 from thermus thermophilus hb8
  Author: h. ishikawa, n. nakagawa, s. kuramitsu, s. yokoyama, r. masui, riken structural genomics/proteomics initiative (rsgi)
  Keywords: nuclease, rna-binding, rrna processing, zinc
  
• 3ie1.pdb. hydrolase/rna 22-jul-09 3ie1 Zn
  Title: crystal structure of h380a mutant ttha0252 from thermus thermophilus hb8 complexed with rna
  Author: h. ishikawa, n. nakagawa, s. kuramitsu, s. yokoyama, r. masui, riken structural genomics/proteomics initiative (rsgi)
  Keywords: rna-binding, rrna processing, zinc, hydrolase/rna complex
  
• 3ie2.pdb. hydrolase 22-jul-09 3ie2 Zn
  Title: crystal structure of h400v mutant ttha0252 from thermus thermophilus hb8
  Author: h. ishikawa, n. nakagawa, s. kuramitsu, s. yokoyama, r. masui, riken structural genomics/proteomics initiative (rsgi)
  Keywords: nuclease, rna-binding, rrna processing, zinc
  
• 3ie7.pdb. transferase 22-jul-09 3ie7 Mg Se
  Title: the crystal structure of phosphofructokinase (lin2199) from listeria innocua in complex with atp at 1.6a
  Author: l. satyanarayana, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
  Keywords: atp, transferase, listeria innocua, glycerol, mg+2 ion, 11206n1, psi-ii, nysgxrc, kinase, structural genomics, protein structure initiative, new york sgx research center for structural genomics
  
• 3ieh.pdb. hydrolase 22-jul-09 3ieh Zn Se
  Title: crystal structure of putative metallopeptidase (yp_001051774.1) from shewanella baltica os155 at 2.45 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: putative metallopeptidase, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, hydrolase
  
• 3ieq.pdb. lyase 23-jul-09 3ieq Cl Mg Zn
  Title: crystal structure of 2c-methyl-d-erythritol 2,4- cyclodiphosphate synthase from burkholderia pseudomallei with cytidine
  Author: seattle structural genomics center for infectious disease (ssgcid)
  Keywords: isoprene biosynthesis, lyase, metal-binding, structural genomics, seattle structural genomics center for infectious disease, ssgcid
  
• 3if2.pdb. transferase 23-jul-09 3if2 Se
  Title: crystal structure of putative amino-acid aminotransferase (yp_265399.1) from psychrobacter arcticum 273-4 at 2.50 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: putative amino-acid aminotransferase, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, aminotransferase, transferase
  
• 3if5.pdb. hydrolase 24-jul-09 3if5
  Title: crystal structure analysis of mglu
  Author: k. yoshimune, y. shirakihara
  Keywords: hydrolase
  
• 3ifd.pdb. cytokine 24-jul-09 3ifd K
  Title: human synthetic monocyte chemoattractant protein 1 (mcp-1)
  Author: a. teplyakov, g. obmolova, g. l. gilliland
  Keywords: quarternary structure, peptide synthesis, chemotaxis, cytokine, disulfide bond, glycoprotein, inflammatory response, pyrrolidone carboxylic acid, secreted
  
• 3ife.pdb. hydrolase 24-jul-09 3ife Zn Na
  Title: 1.55 angstrom resolution crystal structure of peptidase t (pept-1) from bacillus anthracis str. 'ames ancestor'.
  Author: g. minasov, a. halavaty, l. shuvalova, i. dubrovska, j. winsor, w. f. anderson, center for structural genomics of infectious diseases (csgid)
  Keywords: pept-1, metallopeptidase, aminopeptidase, cytoplasm, hydrolase, metal-binding, metalloprotease, protease, zinc, structural genomics, center for structural genomics of infectious diseases, csgid
  
• 3ifg.pdb. oxidoreductase 24-jul-09 3ifg
  Title: crystal structure of succinate-semialdehyde dehydrogenase from burkholderia pseudomallei, part 1 of 2
  Author: seattle structural genomics center for infectious disease (ssgcid)
  Keywords: .infectious disease, ssgcid, seattle structural genomics center for infectious disease, non- crystallographic symmetry, ncs, oxidoreductase
  
• 3ifh.pdb. oxidoreductase 24-jul-09 3ifh
  Title: crystal structure of succinate-semialdehyde dehydrogenase from burkholderia pseudomallei, part 2 of 2
  Author: seattle structural genomics center for infectious disease (ssgcid)
  Keywords: infectious disease, ssgcid, seattle structural genomics center for infectious disease, non- crystallographic symmetry, ncs, oxidoreductase
  
• 3ig4.pdb. hydrolase 27-jul-09 3ig4 Mn Se
  Title: structure of a putative aminopeptidase p from bacillus anthracis
  Author: s. m. anderson, z. wawrzak, t. skarina, o. onopriyenko, k. kwon, w. f. anderson, a. savchenko, center for structural genomics of infectious diseases
  Keywords: bacillus anthracis, csgid, hydrolase, structural genomics, center for structural genomics of infectious diseases
  
• 3igf.pdb. atp binding protein 27-jul-09 3igf Se
  Title: crystal structure of the all4481 protein from nostoc sp. pcc 7120, northeast structural genomics consortium target nsr300
  Author: f. forouhar, m. abashidze, j. seetharaman, m. mao, r. xiao, c. ciccosanti, m. maglaqui, j. k. everett, r. nair, t. b. acton, b. rost, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
  Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, atp binding protein
  
• 3igh.pdb. hydrolase 27-jul-09 3igh
  Title: crystal structure of an uncharacterized metal-dependent hydrolase from pyrococcus horikoshii ot3
  Author: y. patskovsky, r. toro, j. freeman, s. miller, j. m. sauder, f. m. raushel, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
  Keywords: amidohydrolase, psi-2, protein structure initiative, hydrolase, new york sgx research center for structural genomics, nysgxrc
  
• 3igj.pdb. transferase 27-jul-09 3igj Se
  Title: crystal structure of maltose o-acetyltransferase complexed with acetyl coenzyme a from bacillus anthracis
  Author: n. maltseva, y. kim, l. papazisi, w. anderson, a. joachimiak, center for structural genomics of infectious diseases (csgid)
  Keywords: acetyl co-a complex, acyltransferase, transferase, structural genomics, center for structural genomics of infectious diseases, csgid
  
• 3igs.pdb. isomerase 28-jul-09 3igs Cl Se
  Title: structure of the salmonella enterica n-acetylmannosamine-6- phosphate 2-epimerase
  Author: s. m. anderson, z. wawrzak, e. gordon, t. skarina, l. papazisi, w. f. anderson, a. savchenko, center for structural genomics of infectious diseases
  Keywords: energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase, structural genomics, center for structural genomics of infectious diseases
  
• 5cgt.pdb. glycosyltransferase 06-jun-98 5cgt Ca
  Title: maltotriose complex of preconditioned cyclodextrin glycosyltransferase mutant
  Author: g. parsiegla, g. e. schulz
  Keywords: starch degradation, cyclodextrin