Recent PDB releases or updates: week of 31 July 2009
- 1ecy.pdb.
protease inhibitor 06-aug-96 1ecy
Title: protease inhibitor ecotin
Author: d. h. shin, s. w. suh
Keywords: serine protease inhibitor, periplasmic
- 1f9l.pdb.
rna 11-jul-00 1f9l
(solution NMR)
Title: solution structure of a 22-nucleotide hairpin similar to the p5abc region of a group i ribozyme with cobalt(iii) hexammine complexed to the gaaa tetraloop
Author: s. rudisser, i. tinoco jr.
Keywords: gaaa tetraloop, metal-ion binding, cobalt(iii)hexammine, hairpin, p5abc, group i intron, rna
- 1g9h.pdb.
hydrolase 23-nov-00 1g9h
Cl Ca
Title: ternary complex between psychrophilic alpha-amylase, comii (pseudo tri-saccharide from bayer) and tris (2-amino-2- hydroxymethyl-propane-1,3-diol)
Author: n. aghajari, m. roth, r. haser
Keywords: 3 domain structure, hydrolase
- 1ga2.pdb.
hydrolase 29-nov-00 1ga2
Mg Ca
Title: the crystal structure of endoglucanase 9g from clostridium cellulolyticum complexed with cellobiose
Author: d. mandelman, a. belaich, j. p. belaich, n. aghajari, h. driguez, r. haser
Keywords: endoglucanase, cellulase 9g, cellobiose complex, cellulose binding domain, (alpha-alpha)6-barrel, hydrolase
- 1isy.pdb.
hydrolase 27-dec-01 1isy
Title: crystal structure of xylanase from streptomyces olivaceoviridis e-86 complexed with glucose
Author: z. fujimoto, a. kuno, s. kaneko, h. kobayashi, i. kusakabe, h. mizuno
Keywords: protein-sugar complex, carbohydrate binding domain, hydrolase
- 1ivg.pdb.
hydrolase (o-glycosyl) 12-dec-94 1ivg
Ca
Title: structures of aromatic inhibitors of influenza virus neuraminidase
Author: m. j. jedrzejas, m. luo
- 1j0y.pdb.
hydrolase 25-nov-02 1j0y
Ca
Title: beta-amylase from bacillus cereus var. mycoides in complex with glucose
Author: t. oyama, h. miyake, m. kusunoki, y. nitta
Keywords: beta-amylase, raw-starch binding domain
- 1j0z.pdb.
hydrolase 25-nov-02 1j0z
Ca
Title: beta-amylase from bacillus cereus var. mycoides in complex with maltose
Author: t. oyama, h. miyake, m. kusunoki, y. nitta
Keywords: beta-amylase, raw-starch binding domain
- 1j18.pdb.
hydrolase 02-dec-02 1j18
Ca
Title: crystal structure of a beta-amylase from bacillus cereus var. mycoides cocrystallized with maltose
Author: h. miyake, g. kurisu, m. kusunoki, s. nishimura, s. kitamura, y. nitta
Keywords: amylase, complex, tim barel, maltose, hydrolase
- 1jwy.pdb.
hydrolase 05-sep-01 1jwy
Mg
Title: crystal structure of the dynamin a gtpase domain complexed with gdp, determined as myosin fusion
Author: h. h. niemann, m. l. w. knetsch, a. scherer, d. j. manstein, f. j. kull
Keywords: gtpase, gdp, myosin, fusion-protein, dictyostelium, hydrolase
- 1jx2.pdb.
hydrolase 05-sep-01 1jx2
Mg
Title: crystal structure of the nucleotide-free dynamin a gtpase domain, determined as myosin fusion
Author: h. h. niemann, m. l. w. knetsch, a. scherer, d. j. manstein, f. j. kull
Keywords: gtpase, myosin, fusion-protein, dictyostelium, hydrolase
- 1k3i.pdb.
oxidoreductase 03-oct-01 1k3i
Ca
Title: crystal structure of the precursor of galactose oxidase
Author: s. j. firbank, m. s. rogers, c. m. wilmot, d. m. dooley, m. a. halcrow, p. f. knowles, m. j. mcpherson, s. e. v. phillips
Keywords: prosequence form, precursor of copper enzyme., oxidoreductase
- 1k77.pdb.
structural genomics, unknown function 18-oct-01 1k77
Mg Se
Title: crystal structure of ec1530, a putative oxygenase from escherichia coli
Author: y. kim, t. skarina, s. beasley, r. laskowski, c. arrowsmith, a. joachimiak, a. edwards, a. savechenko, midwest center for structural genomics (mcsg)
Keywords: hypothetical protein, structural genomics, psi, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
- 1kck.pdb.
transferase 09-nov-01 1kck
Ca
Title: bacillus circulans strain 251 cyclodextrin glycosyl transferase mutant n193g
Author: h. j. rozeboom, j. c. m. uitdehaag, b. w. dijkstra
Keywords: transferase, cylcodextrin, acarbose
- 1kcl.pdb.
transferase 09-nov-01 1kcl
Ca
Title: bacillus ciruclans strain 251 cyclodextrin glycosyl transferase mutant g179l
Author: h. j. rozeboom, j. c. m. uitdehaag, b. w. dijkstra
Keywords: transferase, cyclodextrin
- 1kme.pdb.
membrane protein 14-dec-01 1kme
Title: crystal structure of bacteriorhodopsin crystallized from bicelles
Author: s. faham, j. u. bowie
- 1kwf.pdb.
hydrolase 29-jan-02 1kwf
Title: atomic resolution structure of an inverting glycosidase in complex with substrate
Author: d. m. a. guerin, m. -b. lascombe, m. costabel, h. souchon, v. lamzin, p. beguin, p. m. alzari
Keywords: inverting glycosidase, atomic resolution, protein-carbohydrate interactions, reaction mechanism, cellulase
- 1mfv.pdb.
hydrolase 13-aug-02 1mfv
Cl Ca
Title: probing the role of a mobile loop in human slaivary amylase: structural studies on the loop-deleted enzyme
Author: n. ramasubbu, c. ragunath, p. j. mishra
Keywords: mutagenesis, acarbose, inhibitor, hydrolase
- 1mmu.pdb.
isomerase 04-sep-02 1mmu
Na
Title: crystal structure of galactose mutarotase from lactococcus lactis complexed with d-glucose
Author: j. b. thoden, j. kim, f. m. raushel, h. m. holden
Keywords: sugar binding, galactosemia, isomerase
- 1nsv.pdb.
isomerase 28-jan-03 1nsv
Na
Title: crystal structure of galactose mutarotase from lactococcus lactis mutant h96n complexed with glucose
Author: h. m. holden, j. b. thoden
Keywords: epimerase, galactose metabolism, isomerase
- 1ot1.pdb.
transferase 21-mar-03 1ot1
Ca
Title: bacillus circulans strain 251 cyclodextrin glycosyl transferase mutant d135a
Author: h. j. rozeboom, b. w. dijkstra
Keywords: cyclodextrin
- 1pez.pdb.
transferase 23-may-03 1pez
Ca
Title: bacillus circulans strain 251 mutant a230v
Author: h. j. rozeboom, b. w. dijkstra
Keywords: transferase, cyclodextrin
- 1q2u.pdb.
rna binding protein 26-jul-03 1q2u
Title: crystal structure of dj-1/rs and implication on familial parkinson's disease
Author: q. huai, y. sun, h. wang, l. s. chin, l. li, h. robinson, h. ke
Keywords: parkinson's disease, male fertility, protein inhibitor of activated stat, androgen receptor, rna binding protein
- 1q6e.pdb.
hydrolase 13-aug-03 1q6e
Title: crystal structure of soybean beta-amylase mutant (e178y) with increased ph optimum at ph 5.4
Author: a. hirata, m. adachi, a. sekine, y. n. kang, s. utsumi, b. mikami
Keywords: beta-amylase, maltose complex, increased ph optimum, hydrolase
- 1ua4.pdb.
transferase 27-feb-03 1ua4
Title: crystal structure of an adp-dependent glucokinase from pyrococcus furiosus
Author: s. ito, j. j. jeong, i. yoshioka, s. koga, s. fushinobu, h. shoun, t. wakagi
Keywords: kinase
- 2a7p.pdb.
oxidoreductase 05-jul-05 2a7p
Title: crystal structure of the g81a mutant of the active chimera of (s)-mandelate dehydrogenase in complex with its substrate 3-indolelactate
Author: n. sukumar, y. xu, b. mitra, f. s. mathews
Keywords: hydroxy acid oxidizing enzyme, oxidoreductase
- 2a85.pdb.
oxidoreductase 07-jul-05 2a85
Title: crystal structure of the g81a mutant of the active chimera of (s)-mandelate dehydrogenase in complex with its substrate 2-hydroxyoctanoate
Author: n. sukumar, y. xu, b. mitra, f. s. mathews
Keywords: hydroxy acid oxidizing enzyme, oxidoreductase
- 2chb.pdb.
toxin 03-jun-97 2chb
Title: cholera toxin b-pentamer complexed with gm1 pentasaccharide
Author: e. a. merritt, w. g. j. hol
Keywords: pentasaccharide
- 2fvv.pdb.
hydrolase 31-jan-06 2fvv
Cl
Title: human diphosphoinositol polyphosphate phosphohydrolase 1
Author: b. m. hallberg, p. kursula, d. ogg, c. arrowsmith, h. berglund, a. edwards, m. ehn, s. flodin, s. graslund, m. hammarstrom, m. hogbom, l. holmberg-schiavone, t. kotenyova, p. nilsson-ehle, p. nordlund, t. nyman, j. sagemark, p. stenmark, m. sundstrom, a. g. thorsell, s. van den berg, j. weigelt, c. persson, structural genomics consortium (sgc)
Keywords: nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium, sgc
- 2g7g.pdb.
transcription 28-feb-06 2g7g
Se
Title: the crystal structure of the putative transcriptional regulator rha04620 from rhodococcus sp. rha1
Author: y. kim, a. joachimiak, e. evdokimova, o. kagan, a. savchenko, a. m. edwards, midwest center for structural genomics (mcsg)
Keywords: structural genomics, psi, protein structure initiative, midwest center for structural genomics, mcsg, transcription
- 2k89.pdb.
protein binding 04-sep-08 2k89
(solution NMR)
Title: solution structure of a novel ubiquitin-binding domain from human plaa (pfuc, gly76-pro77 cis isomer)
Author: q. s. fu, c. j. zhou, h. c. gao, d. h. lin, h. y. hu
Keywords: wd repeat, protein binding
- 2k8a.pdb.
protein binding 04-sep-08 2k8a
(solution NMR)
Title: solution structure of a novel ubiquitin-binding domain from human plaa (pfuc, gly76-pro77 trans isomer)
Author: q. s. fu, c. j. zhou, h. c. gao, d. h. lin, h. y. hu
Keywords: wd repeat, protein binding
- 2k8b.pdb.
protein binding 04-sep-08 2k8b
(solution NMR)
Title: solution structure of plaa family ubiquitin binding domain (pfuc) cis isomer in complex with ubiquitin
Author: q. s. fu, c. j. zhou, h. c. gao, d. h. lin, h. y. hu
Keywords: cytoplasm, nucleus, phosphoprotein, ubl conjugation, wd repeat, protein binding
- 2k8c.pdb.
protein binding 04-sep-08 2k8c
(solution NMR)
Title: solution structure of plaa family ubiquitin binding domain (pfuc) trans isomer in complex with ubiquitin
Author: q. s. fu, c. j. zhou, h. c. gao, d. h. lin, h. y. hu
Keywords: cytoplasm, nucleus, phosphoprotein, ubl conjugation, wd repeat, protein binding
- 2kbu.pdb.
isomerase 08-dec-08 2kbu
(solution NMR)
Title: nmr solution structure of pin1 ww domain mutant with beta turn mimic at position 12
Author: a. a. fuller, g. bhabha, d. a. case
Keywords: beta turn mimic, cell cycle, isomerase, nucleus, phosphoprotein, rotamase
- 2kdq.pdb.
rna binding protein/rna 14-jan-09 2kdq
(solution NMR)
Title: simultaneous recognition of hiv-1 tar rna bulge and loop sequences by cyclic peptide mimic of tat protein
Author: a. davidson, t. c. leeper, g. varani
Keywords: peptidomimetics, peptide structure, rna recognition, immunodeficiency virus, tar rna, mimic of rna binding protein, rna binding protein/rna complex
- 2kfs.pdb.
dna-binding protein 27-feb-09 2kfs
(solution NMR)
Title: nmr structure of rv2175c
Author: p. barthe, m. cohen-gonsaud, c. roumestand, v. molle
Keywords: dna binding, phosphorylation, dna-binding protein
- 2pur.pdb.
lyase 09-may-07 2pur
K
Title: structure of dihydrodipicolinate synthase mutant thr44ser at 1.7 a.
Author: r. c. j dobson, g. b. jameson, j. a. gerrard
Keywords: lyase
- 2q9p.pdb.
hydrolase 13-jun-07 2q9p
Cl Mg F
Title: human diphosphoinositol polyphosphate phosphohydrolase 1, mg-f complex
Author: a. g. thorsell, r. busam, c. h. arrowsmith, h. berglund, r. collins, l. g. dahlgren, a. edwards, s. flodin, a. flores, s. graslund, m. hammarstrom, l. holmberg-schiavone, i. johansson, a. kallas, t. karlberg, t. kotenyova, l. lehtio, m. moche, p. nordlund, t. nyman, d. ogg, j. sagemark, m. sundstrom, s. van den berg, j. weigelt, m. welin, c. persson, b. m. hallberg, structural genomics consortium (sgc)
Keywords: nudix, inositol pyrophosphate metabolism, structural genomics consortium, sgc
- 2r4t.pdb.
transferase 01-sep-07 2r4t
Title: crystal structure of wild-type e.coli gs in complex with adp and glucose(wtgsc)
Author: f. sheng, j. geiger
Keywords: gt-b fold, rossmann fold, closed-form, adp and glucose binding
- 2r4u.pdb.
transferase 01-sep-07 2r4u
Title: crystal structure of wild-type e.coli gs in complex with adp and glucose(wtgsd)
Author: f. sheng, j. geiger
Keywords: gt-b fold, rossmann fold, closed-form, adp and glucose binding
- 2vay.pdb.
metal transport 05-sep-07 2vay
Cl Ca
Title: calmodulin complexed with cav1.1 iq peptide
Author: d. b. halling, d. j. black, s. e. pedersen, s. l. hamilton
Keywords: calcium transport, ubl conjugation, calcium channel, skeletal muscle, voltage-dependent, voltage-gated channel
- 2vld.pdb.
hydrolase 14-jan-08 2vld
Se
Title: crystal structure of a repair endonuclease from pyrococcus abyssi
Author: b. ren, j. kuhn, l. meslet-cladiere, j. briffotaux, c. norais, r. lavigne, d. flament, r. ladenstein, h. myllykallio
Keywords: hydrolase
- 2w55.pdb.
oxidoreductase 04-dec-08 2w55
Ba Mo Fe
Title: crystal structure of xanthine dehydrogenase (e232q variant) from rhodobacter capsulatus in complex with hypoxanthine
Author: j. a. doebbler, j. j. truglio, s. leimkuhler, c. kisker
Keywords: gout, iron, 2fe-2s, xanthine, iron-sulfur, molybdenum cofactor, hypoxanthine, metal-binding, oxidoreductase
- 2wag.pdb.
hydrolase 06-feb-09 2wag
Mg
Title: the structure of a family 25 glycosyl hydrolase from bacillus anthracis.
Author: c. martinez-fleites, j. e. korczynska, m. cope, j. p. turkenburg, e. j. taylor
Keywords: gh25, lysin, lysozyme, bacillus anthracis
- 2wd7.pdb.
oxidoreductase 20-mar-09 2wd7
Cl
Title: teridine reductase 1 (ptr1) from trypanosoma brucei in complex with nadp and ddd00066750
Author: d. a. robinson, p. g. wyatt, d. spinks, r. brenk
Keywords: drug discovery, oxidoreductase, trypanosomatids, pteridine reductase, methotrexate resistance
- 2wd8.pdb.
oxidoreductase 20-mar-09 2wd8
Cl
Title: teridine reductase 1 (ptr1) from trypanosoma brucei in complex with nadp and ddd00071204
Author: d. a. robinson, p. g. wyatt, d. spinks, r. brenk
Keywords: drug discovery, oxidoreductase, trypanosomatids, pteridine reductase, methotrexate resistance
- 2wes.pdb.
antifungal protein 01-apr-09 2wes
Cl
Title: crystal structures of mutant e46q of tryptophan 5- halogenase (pyrh)
Author: x. zhu, j. h. naismith
Keywords: tryptophan 5-halogenase, antifungal protein
- 2wet.pdb.
antifungal protein 01-apr-09 2wet
Cl
Title: crystal structure of tryptophan 5-halogenase (pyrh) complex with fad (tryptophan)
Author: w. de laurentis, x. zhu, j. h. naismith
Keywords: tryptophan 5-halogenase, antifungal protein
- 2weu.pdb.
antifungal protein 01-apr-09 2weu
Title: crystal structure of tryptophan 5-halogenase (pyrh) complex with substrate tryptophan
Author: k. leang, x. zhu, j. h. naismith
Keywords: tryptophan 5-halogenase, antifungal protein
- 2wio.pdb.
oxidoreductase 14-may-09 2wio
Fe
Title: structure of the open histidine tagged c. savino, cytochrome p450 eryk
Author: c. savino, l. c. montemiglio, g. sciara, a. e. miele, s. g. kedrew, s. gianni, b. vallone
Keywords: antibiotic biosynthesis, metal-binding, oxidoreductase, cytochrome p450, iron, heme, erythromicyn, monooxygenase
- 2wja.pdb.
hydrolase 25-may-09 2wja
Ni
Title: crystal structure of the tyrosine phosphatase wzb from escherichia coli k30 in complex with phosphate.
Author: h. huang, g. hagelueken, c. whitfield, j. h. naismith
Keywords: phosphatase
- 2wjd.pdb.
hydrolase 25-may-09 2wjd
Sm Mn
Title: crystal structure of the tyrosine phosphatase cps4b from steptococcus pneumoniae tigr4.
Author: g. hagelueken, h. huang, j. h. naismith
Keywords: manganese, hydrolase, phosphatase, protein phosphatase, exopolysaccharide synthesis
- 2wje.pdb.
hydrolase 25-may-09 2wje
Mn
Title: crystal structure of the tyrosine phosphatase cps4b from steptococcus pneumoniae tigr4.
Author: g. hagelueken, h. huang, j. h. naismith
Keywords: manganese, hydrolase, phosphatase, protein phosphatase, exopolysaccharide synthesis
- 2wjf.pdb.
hydrolase 25-may-09 2wjf
Mn
Title: crystal structure of the tyrosine phosphatase cps4b from steptococcus pneumoniae tigr4 in complex with phosphate.
Author: g. hagelueken, h. huang, j. h. naismith
Keywords: manganese, hydrolase, phosphatase, protein phosphatase, exopolysaccharide synthesis
- 2wk5.pdb.
transferase 05-jun-09 2wk5
Title: structural features of native human thymidine phosphorylase and in complex with 5-iodouracil
Author: e. mitsiki, a. c. papageorgiou, s. iyer, n. thiyagarajan, s. h. prior, d. sleep, c. finnis, k. r. acharya
Keywords: developmental protein, angiogenesis, 5-iodouracil, growth factor, enzyme kinetics, differentiation, disease mutation, thymidine phosphorylase, chemotaxis, transferase, mutagenesis, polymorphism
- 2wk6.pdb.
transferase 05-jun-09 2wk6
I
Title: structural features of native human thymidine phosphorylase and in complex with 5-iodouracil
Author: e. mitsiki, a. c. papageorgiou, s. iyer, n. thiyagarajan, s. h. prior, d. sleep, c. finnis, k. r. acharya
Keywords: developmental protein, angiogenesis, 5-iodouracil, growth factor, enzyme kinetics, differentiation, disease mutation, thymidine phosphorylase, chemotaxis, transferase, mutagenesis, polymorphism
- 2wmf.pdb.
hydrolase 30-jun-09 2wmf
Title: crystal structure of the catalytic module of a family 98 glycoside hydrolase from streptococcus pneumoniae tigr4 ( sp4gh98) in its native form.
Author: m. a. higgins, g. whitworth, n. el warry, m. randriantsoa, e. samain, r. d. burke, d. j. vocadlo, a. b. boraston
Keywords: glycoside hydrolase, streptococcus pneumoniae, blood group antigen, fucose utilization
- 2wmg.pdb.
hydrolase 30-jun-09 2wmg
Title: crystal structure of the catalytic module of a family 98 glycoside hydrolase from streptococcus pneumoniae tigr4 ( sp4gh98) in complex with the lewisy pentasaccharide blood group antigen.
Author: m. a. higgins, g. whitworth, n. el warry, m. randriantsoa, e. samain, r. d. burke, d. j. vocadlo, a. b. boraston
Keywords: glycoside hydrolase, streptococcus pneumoniae, lewisy blood group antigen, fucose utilization
- 2wmh.pdb.
hydrolase 30-jun-09 2wmh
Title: crystal structure of the catalytic module of a family 98 glycoside hydrolase from streptococcus pneumoniae tigr4 in complex with the h-disaccharide blood group antigen.
Author: m. a. higgins, g. whitworth, n. el warry, m. randriantsoa, e. samain, r. d. burke, d. j. vocadlo, a. b. boraston
Keywords: glycoside hydrolase, streptococcus pneumoniae, blood group antigen, fucose utilization
- 2wmi.pdb.
hydrolase 30-jun-09 2wmi
Title: crystal structure of the catalytic module of a family 98 glycoside hydrolase from streptococcus pneumoniae sp3-bs71 in complex with the a-trisaccharide blood group antigen.
Author: m. a. higgins, g. whitworth, n. el warry, m. randriantsoa, e. samain, r. d. burke, d. j. vocadlo, a. b. boraston
Keywords: streptococcus pneumoniae, hydrolase, fucose utilization, blood group antigen
- 2wmj.pdb.
hydrolase 30-jun-09 2wmj
Title: crystal structure of the catalytic module of a family 98 glycoside hydrolase from streptococcus pneumoniae sp3-bs71 (sp3gh98) in complex with the b-trisaccharide blood group antigen.
Author: m. a. higgins, g. whitworth, n. el warry, m. randriantsoa, e. samain, r. d. burke, d. j. vocadlo, a. b. boraston
Keywords: streptococcus pneumoniae, hydrolase, fucose utilization, blood group antigen
- 2wmk.pdb.
hydrolase 30-jun-09 2wmk
Title: crystal structure of the catalytic module of a family 98 glycoside hydrolase from streptococcus pneumoniae sp3-bs71 (sp3gh98) in complex with the a-lewisy pentasaccharide blood group antigen.
Author: m. a. higgins, g. whitworth, n. el warry, m. randriantsoa, e. samain, r. d. burke, d. j. vocadlo, a. b. boraston
Keywords: streptococcus pneumoniae, blood group antigen, fucose utilization, hydrolase
- 2znn.pdb.
transcription 30-apr-08 2znn
Title: human pprr alpha ligand binding domain in complex with a synthetic agonist tipp703
Author: t. oyama, k. toyota, j. kasuga, h. miyachi, k. morikawa
Keywords: protein-ligand complex, ppar, activator, dna-binding, metal-binding, nucleus, polymorphism, receptor, transcription, transcription regulation, zinc, zinc-finger
- 2zno.pdb.
transcription 30-apr-08 2zno
Title: human pprr gamma ligand binding domain in complex with a synthetic agonist tipp703
Author: t. oyama, t. waku, j. kasuga, h. miyachi, k. morikawa
Keywords: transcription regulation, zinc, zinc-finger
- 2znp.pdb.
transcription 30-apr-08 2znp
F
Title: human pprr delta ligand binding domain in complex with a synthetic agonist tipp204
Author: t. oyama, y. hirakawa, n. nagasawa, h. miyachi, k. morikawa
Keywords: protein-ligand complex, ppar, activator, alternative splicing, dna-binding, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc, zinc-finger
- 2znq.pdb.
transcription 30-apr-08 2znq
F
Title: human pprr delta ligand binding domain in complex with a synthetic agonist tipp401
Author: t. oyama, y. hirakawa, n. nagasawa, h. miyachi, k. morikawa
Keywords: protein-ligand complex, ppar, activator, alternative splicing, dna-binding, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc, zinc-finger
- 3be7.pdb.
hydrolase 16-nov-07 3be7
Mg
Title: crystal structure of zn-dependent arginine carboxypeptidase
Author: y. patskovsky, u. a. ramagopal, r. toro, a. j. meyer, j. freeman, m. iizuka, k. bain, l. rodgers, f. raushel, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: amidohydrolase, sargasso sea, structural genomics, protein structure initiative, psi, new york sgx research center for structural genomics, nysgxrc, hydrolase
- 3cel.pdb.
hydrolase 24-aug-96 3cel
Cd
Title: active-site mutant e212q determined at ph 6.0 with cellobiose bound in the active site
Author: c. divne, j. stahlberg, t. a. jones
Keywords: hydrolase, glycosidase, glycoprotein
- 3ch2.pdb.
hydrolase 07-mar-08 3ch2
Ca
Title: crystal structure analysis of sera5e from plasmodium falciparum
Author: b. j. smith, r. l. malby, p. m. colman, o. b. clarke
Keywords: papain family, glycoprotein, hydrolase, malaria, thiol protease, vacuole
- 3ch3.pdb.
hydrolase 07-mar-08 3ch3
K
Title: crystal structure analysis of sera5e from plasmodium falciparum
Author: b. j. smith, r. l. malby, p. m. colman, o. b. clarke
Keywords: papain family, glycoprotein, hydrolase, malaria, thiol protease, vacuole
- 3chb.pdb.
toxin 24-mar-98 3chb
Title: cholera toxin b-pentamer complexed with gm1 pentasaccharide
Author: e. a. merritt, w. g. j. hol
Keywords: toxin/receptor complex, pentasaccharide
- 3crv.pdb.
hydrolase 07-apr-08 3crv
Fe
Title: "xpd_helicase"
Author: l fan, a. s. arvai, j. a. tainer
Keywords: helicase, hydrolase
- 3crw.pdb.
hydrolase 07-apr-08 3crw
Fe
Title: "xpd_apo"
Author: l. fan, a. s. arvai, j. a. tainer
Keywords: helicase, hydrolase
- 3cxi.pdb.
toxin 24-apr-08 3cxi
Title: structure of bthtx-i complexed with alpha-tocopherol
Author: j. i. dos santos, m. r. m. fontes
Keywords: bothrops jaracussu, lys49-pla2, snake venom, phospholipase a2, x-ray crystallography, secreted
- 3cyl.pdb.
toxin 25-apr-08 3cyl
Title: crystal structure of piratoxin i (a myotoxic lys49-pla2) complexed with alpha-tocopherol
Author: j. i. dos santos, m. r. m. fontes
Keywords: bothrops pirajai, sanke venom, x-ray crystallography, alpha-tocopherol, prtx-i, myotoxin, secreted, toxin
- 3cyz.pdb.
pheromone binding protein 27-apr-08 3cyz
Cl Mg
Title: dimeric crystal structure of a pheromone binding protein from apis mellifera in complex with 9-keto-2(e)-decenoic acid at ph 7.0
Author: m. e. pesenti, s. spinelli, v. bezirard, l. briand, j. c. pernollet, m. tegoni, c. cambillau
Keywords: apis mellifera, pheromone binding protein, signal transduction, queen mandibular pheromone
- 3cz0.pdb.
pheromone binding protein 27-apr-08 3cz0
Cl Mg
Title: dimeric crystal structure of a pheromone binding protein from apis mellifera in complex with the n-butyl benzene sulfonamide at ph 7.0
Author: m. e. pesenti, s. spinelli, v. bezirard, l. briand, j. c. pernollet, m. tegoni, c. cambillau
Keywords: apis mellifera, pheromone binding protein, signal transduction, queen mandibular pheromone
- 3cz1.pdb.
pheromone binding protein 27-apr-08 3cz1
Cl Mg
Title: dimeric crystal structure of a pheromone binding protein from apis mellifera in complex with the n-butyl benzene sulfonamide at ph 7.0
Author: m. e. pesenti, s. spinelli, v. bezirard, l. briand, j. c. pernollet, m. tegoni, c. cambillau
Keywords: pheromone binding protein, signal transduction, queen mandibular pheromone
- 3cz2.pdb.
pheromone binding protein 27-apr-08 3cz2
Cl
Title: dimeric crystal structure of a pheromone binding protein from apis mellifera at ph 7.0
Author: m. e. pesenti, s. spinelli, v. bezirard, l. briand, j. c. pernollet, m. tegoni, c. cambillau
Keywords: apis mellifera, signal transduction, queen mandibular protein, pheromone binding protein
- 3d3w.pdb.
oxidoreductase 12-may-08 3d3w
Title: structure of l-xylulose reductase with bound coenzyme, phosphate and hydroxide.
Author: h. -t. zhao, o. el-kabbani
Keywords: uronate cycle, short-chain dehydrogenase/reductase(sdr) superfamily, glucose metabolism, acetylation, carbohydrate metabolism, membrane, nadp, oxidoreductase, xylose metabolism
- 3d73.pdb.
pheromone binding protein 20-may-08 3d73
Title: crystal structure of a pheromone binding protein mutant d35a, from apis mellifera, at ph 7.0
Author: m. e. pesenti, s. spinelli, v. bezirard, l. briand, j. c. pernollet, m. tegoni, c. cambillau
Keywords: honey bee, apis mellifera, signal transduction, queen mandibular protein, ph
- 3d74.pdb.
pheromone binding protein 20-may-08 3d74
Title: crystal structure of a pheromone binding protein mutant d35a, from apis mellifera, soaked at ph 5.5
Author: m. e. pesenti, s. spinelli, v. bezirard, l. briand, j. c. pernollet, m. tegoni, c. cambillau
Keywords: honey bee, apis mellifera, signal transduction, queen mandibular protein, ph
- 3d75.pdb.
pheromone binding protein 20-may-08 3d75
Title: crystal structure of a pheromone binding protein mutant d35n, from apis mellifera, at ph 5.5
Author: m. e. pesenti, s. spinelli, v. bezirard, l. briand, j. c. pernollet, m. tegoni, c. cambillau
Keywords: honey bee, apis mellifera, signal transduction, queen mandibular protein, ph
- 3d76.pdb.
pheromone binding protein 20-may-08 3d76
Na
Title: crystal structure of a pheromone binding protein mutant d35n, from apis mellifera, soaked at ph 7.0
Author: m. e. pesenti, s. spinelli, v. bezirard, l. briand, j. c. pernollet, m. tegoni, c. cambillau
Keywords: honey bee, apis mellifera, signal transduction, queen mandibular protein, ph
- 3d77.pdb.
pheromone binding protein 20-may-08 3d77
Na
Title: crystal structure of a pheromone binding protein mutant d35n, from apis mellifera, soaked at ph 4.0
Author: m. e. pesenti, s. spinelli, v. bezirard, l. briand, j. c. pernollet, m. tegoni, c. cambillau
Keywords: honey bee, apis mellifera, signal transduction, queen mandibular protein, ph
- 3d78.pdb.
pheromone binding protein 20-may-08 3d78
Title: dimeric crystal structure of a pheromone binding protein mutant d35n, from apis mellifera, at ph 7.0
Author: m. e. pesenti, s. spinelli, v. bezirard, l. briand, j. c. pernollet, m. tegoni, c. cambillau
Keywords: honey bee, apis mellifera, signal transduction, queen mandibular protein, ph
- 3dsc.pdb.
hydrolase/dna 11-jul-08 3dsc
Title: crystal structure of p. furiosus mre11 dna synaptic complex
Author: r. s. williams, g. moncalian, d. s. shin, j. a. tainer
Keywords: double helix, nuclease, dna damage, dna repair, endonuclease, exonuclease, hydrolase, manganese, metal-binding, hydrolase/dna complex
- 3dsd.pdb.
hydrolase/dna 11-jul-08 3dsd
Mn
Title: crystal structure of p. furiosus mre11-h85s bound to a branched dna and manganese
Author: r. s. williams, d. moiani, j. a. tainer
Keywords: double helix, nuclease, dna damage, dna repair, endonuclease, exonuclease, hydrolase, manganese, metal-binding, hydrolase/dna complex
- 3dug.pdb.
hydrolase 17-jul-08 3dug
Zn
Title: crystal structure of zn-dependent arginine carboxypeptidase complexed with zinc
Author: y. patskovsky, u. a. ramagopal, r. toro, a. j. meyer, j. freeman, m. iizuka, k. bain, l. rodgers, f. raushel, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: new york sgx research center for structural genomics
- 3dvl.pdb.
circadian clock protein, transferase 18-jul-08 3dvl
Mg
Title: crystal structure of full length circadian clock protein kaic with correct geometry at phosphorylation sites
Author: r. pattanayek, m. egli
Keywords: serine/threonine- protein kinase, transcription, transcription regulation
- 3dww.pdb.
isomerase 23-jul-08 3dww
(electron crystallography)
Title: electron crystallographic structure of human microsomal prostaglandin e synthase 1
Author: h. hebert, c. jegerschold
Keywords: four helix bundle, isomerase, membrane, transmembrane
- 3dxk.pdb.
structural protein 24-jul-08 3dxk
Title: structure of bos taurus arp2/3 complex with bound inhibitor ck0944636
Author: b. j. nolen, n. tomasevic, a. russell, d. d. pierce, z. jia, j. hartman, r. sakowicz, t. t. pollard
Keywords: acetylation, actin-binding, atp-binding, cell projection, cytoplasm, cytoskeleton, nucleotide- binding, phosphoprotein, wd repeat, structural protein
- 3dxm.pdb.
structural protein 24-jul-08 3dxm
Cl Br
Title: structure of bos taurus arp2/3 complex with bound inhibitor ck0993548
Author: b. j. nolen, n. tomasevic, a. russell, d. d. pierce, z. jia, j. hartman, r. sakowicz, t. t. pollard
Keywords: structural protein
- 3dxu.pdb.
oxidoreductase 25-jul-08 3dxu
Zn Fe
Title: the crystal structure of core jmjd2d complexed with fe and n-oxalylglycine
Author: z. chen, g. zhang
Keywords: jmjc, nog, histone demethylase, chromatin regulator, dioxygenase, iron, metal-binding, nucleus, oxidoreductase, polymorphism, transcription, transcription regulation, zinc
- 3dxw.pdb.
isomerase 25-jul-08 3dxw
Title: the crystal structure of alpha-amino-epsilon-caprolactam racemase from achromobacter obae complexed with epsilon caprolactam
Author: s. okazaki, a. suzuki, h. komeda, y. asano, t. yamane
Keywords: pyridoxal-5'-phosphate dependent racemase, pyridoxal phosphate, isomerase
- 3dyi.pdb.
hydrolase 28-jul-08 3dyi
Cl
Title: snapshots of esterase d from lactobacillus rhamnosus: insights into a rotation driven catalytic mechanism
Author: m. d. bennett, m. -l. delabre, r. holland, g. e. norris
Keywords: mechanism, catalytic triad, rotation, esterase
- 3dyv.pdb.
hydrolase 28-jul-08 3dyv
Cl
Title: snapshots of esterase d from lactobacillus rhamnosus: insights into a rotation driven catalytic mechanism
Author: m. d. bennett, m. -l. delabre, r. holland, g. e. norris
Keywords: mechanism, catalytic triad, rotation, esterase
- 3e24.pdb.
lyase 05-aug-08 3e24
Zn
Title: h. influenzae beta-carbonic anhydrase, variant w39f
Author: r. s. rowlett, j. lee
Keywords: allosteric site mutant, lyase, metal-binding, zinc
- 3e28.pdb.
lyase 05-aug-08 3e28
Zn
Title: h. influenzae beta-carbonic anhydrase, variant y181f
Author: r. s. rowlett, j. lee
Keywords: allosteric site mutant, lyase, metal-binding, zinc
- 3e2a.pdb.
lyase 05-aug-08 3e2a
Zn
Title: h. influenzae beta-carbonic anhydrase, variant y181f with 100 mm bicarbonate
Author: r. s. rowlett, j. lee
Keywords: allosteric site mutant, lyase, metal-binding, zinc
- 3e2c.pdb.
oxidoreductase 05-aug-08 3e2c
Zn Fe
Title: escherichia coli bacterioferritin mutant e128r/e135r
Author: s. g. wong, s. a. l. tom-yew, a. lewin, n. e. le brun, g. r. moore, m. e. p. murphy, a. g. mauk
Keywords: iron storage, metal-binding, heme, iron, oxidoreductase
- 3e74.pdb.
hydrolase 17-aug-08 3e74
Fe Se
Title: crystal structure of e. coli allantoinase with iron ions at the metal center
Author: k. kim
Keywords: small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc
- 3e8l.pdb.
hydrolase inhibitor/hydrolase 20-aug-08 3e8l
Na Ca
Title: the crystal structure of the double-headed arrowhead protease inhibitor a in complex with two trypsins
Author: r. bao, c. -h. jiang, c. w. chi, s. x. lin, y. x. chen
Keywords: protease inhibitor, trypsin, complex, calcium, digestion, hydrolase, metal-binding, protease, secreted, serine protease, zymogen, hydrolase inhibitor/hydrolase complex
- 3ef3.pdb.
hydrolase 08-sep-08 3ef3
Cl Pt
Title: cut-1a; ncn-pt-pincer-cutinase hybrid
Author: l. rutten, j. p. b. a. mannie, m. lutz, p. gros
Keywords: glycoprotein, hydrolase, secreted, serine esterase
- 3egm.pdb.
oxidoreductase 11-sep-08 3egm
Fe
Title: structural basis of iron transport gating in helicobacter pylori ferritin
Author: k. h. kim, k. j. cho, h. j. shin, j. h. lee
Keywords: cytoplasm, iron, metal-binding, oxidoreductase
- 3en0.pdb.
hydrolase 25-sep-08 3en0
Title: the structure of cyanophycinase
Author: m. s. kimber, a. m. law, s. w. s. lai, j. tavares
Keywords: beta peptide specific, hydrolase, protease
- 3esa.pdb.
hydrolase 05-oct-08 3esa
Cl Pt
Title: cut-1b; ncn-pt-pincer-cutinase hybrid
Author: l. rutten, j. p. b. a. mannie, m. lutz, p. gros
Keywords: glycoprotein, hydrolase, secreted, serine esterase
- 3esb.pdb.
hydrolase 05-oct-08 3esb
Cl Pt
Title: cut-1c; ncn-pt-pincer-cutinase hybrid
Author: l. rutten, j. p. b. a. mannie, m. lutz, p. gros
Keywords: glycoprotein, hydrolase, secreted, serine esterase
- 3esc.pdb.
hydrolase 05-oct-08 3esc
Br Pd
Title: cut-2a; ncn-pt-pincer-cutinase hybrid
Author: l. rutten, j. p. b. a. mannie, m. lutz, p. gros
Keywords: glycoprotein, hydrolase, secreted, serine esterase
- 3esd.pdb.
hydrolase 05-oct-08 3esd
Br Pd
Title: cut-2b; ncn-pt-pincer-cutinase hybrid
Author: l. rutten, j. p. b. a. mannie, m. lutz, p. gros
Keywords: glycoprotein, hydrolase, secreted, serine esterase
- 3eu7.pdb.
transcription/antitumor protein 09-oct-08 3eu7
Title: crystal structure of a palb2 / brca2 complex
Author: a. w. oliver, l. h. pearl
Keywords: transcription/antitumor protein complex
- 3eux.pdb.
hydrolase 12-oct-08 3eux
Title: crystal structure of crosslinked ribonuclease a
Author: m. dechene, g. wink, m. smith, p. swartz, c. mattos
Keywords: organic solvents, multiple solvent crystal structures, endonuclease, glycation, glycoprotein, hydrolase, nuclease, secreted
- 3euy.pdb.
hydrolase 12-oct-08 3euy
Title: crystal structure of ribonuclease a in 50% dioxane
Author: m. dechene, g. wink, m. smith, p. swartz, c. mattos
Keywords: organic solvents, multiple solvent crystal structures, endonuclease, glycation, glycoprotein, hydrolase, nuclease, secreted
- 3euz.pdb.
hydrolase 12-oct-08 3euz
Title: crystal structure of ribonuclease a in 50% dimethylformamide
Author: m. dechene, g. wink, m. smith, p. swartz, c. mattos
Keywords: organic solvents, multiple solvent crystal structures, endonuclease, glycation, glycoprotein, hydrolase, nuclease, secreted
- 3ev0.pdb.
hydrolase 12-oct-08 3ev0
Title: crystal structure of ribonuclease a in 70% dimethyl sulfoxide
Author: m. dechene, g. wink, m. smith, p. swartz, c. mattos
Keywords: organic solvents, multiple solvent crystal structures, endonuclease, glycation, glycoprotein, hydrolase, nuclease, secreted
- 3ev1.pdb.
hydrolase 12-oct-08 3ev1
Title: crystal structure of ribonuclease a in 70% hexanediol
Author: m. dechene, g. wink, m. smith, p. swartz, c. mattos
Keywords: organic solvents, multiple solvent crystal structures, endonuclease, glycation, glycoprotein, hydrolase, nuclease, secreted
- 3ev2.pdb.
hydrolase 12-oct-08 3ev2
Title: crystal structure of ribonuclease a in 70% isopropanol
Author: m. dechene, g. wink, m. smith, p. swartz, c. mattos
Keywords: organic solvents, multiple solvent crystal structures, endonuclease, glycation, glycoprotein, hydrolase, nuclease, secreted
- 3ev3.pdb.
hydrolase 12-oct-08 3ev3
Title: crystal structure of ribonuclease a in 70% t-butanol
Author: m. dechene, g. wink, m. smith, p. swartz, c. mattos
Keywords: organic solvents, multiple solvent crystal structures, endonuclease, glycation, glycoprotein, hydrolase, nuclease, secreted
- 3ev4.pdb.
hydrolase 12-oct-08 3ev4
F
Title: crystal structure of ribonuclease a in 50% trifluoroethanol
Author: m. dechene, g. wink, m. smith, p. swartz, c. mattos
Keywords: organic solvents, multiple solvent crystal structures, endonuclease, glycation, glycoprotein, hydrolase, nuclease, secreted
- 3ev5.pdb.
hydrolase 12-oct-08 3ev5
Title: crystal structure of ribonuclease a in 1m trimethylamine n- oxide
Author: m. dechene, g. wink, m. smith, p. swartz, c. mattos
Keywords: organic solvents, multiple solvent crystal structures, endonuclease, glycation, glycoprotein, hydrolase, nuclease, secreted
- 3ev6.pdb.
hydrolase 12-oct-08 3ev6
Title: crystal structure of ribonuclease a in 50% r,s,r-bisfuranol
Author: m. dechene, g. wink, m. smith, p. swartz, c. mattos
Keywords: organic solvents, multiple solvent crystal structures, endonuclease, glycation, glycoprotein, hydrolase, nuclease, secreted
- 3f1r.pdb.
hormone 28-oct-08 3f1r
Title: crystal structure of fgf20 dimer
Author: j. kalinina, m. mohammadi
Keywords: growth factor, polymorphism, secreted, hormone
- 3f53.pdb.
cell adhesion 03-nov-08 3f53
Cl F Se
Title: crystal structure of toxoplasma gondii micronemal protein 1 bound to 2f-3'sialacnac
Author: j. a. garnett
Keywords: micronemal protein, carbohydrate, fluorine, toxoplasma gondii, cytoplasmic vesicle, lectin, virulence
- 3f5a.pdb.
cell adhesion 03-nov-08 3f5a
Cl Se
Title: crystal structure of toxoplasma gondii micronemal protein 1 bound to 3'sialacnac1-3
Author: j. a. garnett, y. liu, t. feizi, s. j. matthews
Keywords: micronemal protein, toxoplasma gondii, carbohydrate, fluorine, cell adhesion, cytoplasmic vesicle, lectin, virulence
- 3f5e.pdb.
cell adhesion 03-nov-08 3f5e
Cl F Se
Title: crystal structure of toxoplasma gondii micronemal protein 1 bound to 2'f-3'sialacnac1-3
Author: j. a. garnett, y. liu, t. feizi, s. j. matthews
Keywords: micronemal protein 1, toxoplasma gondii, carbohydrate, fluorine, cell adhesion, cytoplasmic vesicle, lectin, virulence
- 3f8k.pdb.
transferase 12-nov-08 3f8k
Se
Title: crystal structure of protein acetyltransferase (pat) from sulfolobus solfataricus
Author: m. m. brent
- 3f96.pdb.
hydrolase 13-nov-08 3f96
Title: crystal structure of human plasma platelet activating factor acetylhydrolase covalently inhibited by sarin
Author: u. samanta, b. j. bahnson
Keywords: disease mutation, secreted
- 3f97.pdb.
hydrolase 13-nov-08 3f97
Title: crystal structure of human plasma platelet activating factor acetylhydrolase covalently inhibited by soman
Author: u. samanta, b. j. bahnson
Keywords: disease mutation, secreted
- 3f98.pdb.
hydrolase 13-nov-08 3f98
Title: crystal structure of human plasma platelet activating factor acetylhydrolase covalently inhibited by tabun
Author: u. samanta, b. j. bahnson
Keywords: disease mutation, secreted
- 3f9c.pdb.
hydrolase 13-nov-08 3f9c
Title: crystal structure of human plasma platelet activating factor acetylhydrolase covalently inhibited by diisopropylfluorophosphate
Author: u. samanta, b. j. bahnson
Keywords: diisopropylfluorophosphate, dfp, disease mutation, secreted
- 3ff7.pdb.
cell adhesion/immunue system 02-dec-08 3ff7
Title: structure of nk cell receptor klrg1 bound to e-cadherin
Author: y. li, r. a. mariuzza
Keywords: lectin, receptor, signal-anchor, cell adhesion/immunue system complex
- 3ff8.pdb.
cell adhesion/immune system 02-dec-08 3ff8
Ca
Title: structure of nk cell receptor klrg1 bound to e-cadherin
Author: y. li, r. a. mariuzza
Keywords: signal-anchor, cell adhesion/immune system complex
- 3ff9.pdb.
immune system 02-dec-08 3ff9
Title: structure of nk cell receptor klrg1
Author: y. li, r. a. mariuzza
Keywords: glycoprotein, lectin, membrane, phosphoprotein, receptor, signal-anchor, transmembrane, immune system
- 3fie.pdb.
hydrolase, toxin/protein transport 11-dec-08 3fie
Zn
Title: crystal structure of clostridium botulinum neurotoxin serotype f catalytic domain with an inhibitor (inh1)
Author: r. agarwal, s. swaminathan
Keywords: bont f, vamp, inhibitor, complex structure, acetylation, cell junction, crystal structure, hydrolase, toxin/protein transport complex
- 3fii.pdb.
hydrolase, toxin/protein transport 11-dec-08 3fii
Zn
Title: crystal structure of clostridium botulinum neurotoxin serotype f catalytic domain with an inhibitor (inh2)
Author: r. agarwal, s. swaminathan
Keywords: bont f, vamp, inhibitor, complex structure, acetylation, cell junction, crystal structure, hydrolase, toxin/protein transport complex
- 3fku.pdb.
viral protein/immune system 17-dec-08 3fku
Title: crystal structure of influenza hemagglutinin (h5) in complex with a broadly neutralizing antibody f10
Author: w. c. hwang, e. santelli, b. stec, g. wei, g. cadwell, l. a. bankston, j. sui, s. perez, d. aird, l. m. chen, m. ali, a. murakami, a. yammanuru, t. han, n. cox, r. o. donis, r. c. liddington, w. a. marasco
Keywords: palmitate, viral protein, viral protein/immune system complex
- 3fnk.pdb.
structural protein 25-dec-08 3fnk
Title: crystal structure of the second type ii cohesin module from the cellulosomal adaptor scaa scaffoldin of acetivibrio cellulolyticus
Author: i. noach, f. frolow, e. a. bayer
Keywords: dockerin-binding module, beta barrel, alpha helix, beta flaps, structural protein
- 3fp2.pdb.
transport protein 03-jan-09 3fp2
Cl Mg
Title: crystal structure of tom71 complexed with hsp82 c-terminal fragment
Author: j. li, x. qian, j. hu, b. sha
Keywords: mitochondria translocation, chaperone, allosteric regulation, phosphoprotein, tpr repeat, atp-binding, cytoplasm, nucleotide-binding, stress response, transport protein
- 3fp3.pdb.
transport protein 03-jan-09 3fp3
Cl
Title: crystal structure of tom71
Author: j. li, x. qian, j. hu, b. sha
Keywords: chaperone, mitochondria, translocation, phosphoprotein, tpr repeat, transport protein
- 3fp4.pdb.
transport protein 03-jan-09 3fp4
Cl Na
Title: crystal structure of tom71 complexed with ssa1 c-terminal fragment
Author: j. li, x. qian, j. hu, b. sha
Keywords: hsp70, mitochondria, translocation, chaperone, phosphoprotein, tpr repeat, transport protein
- 3frr.pdb.
protein binding 08-jan-09 3frr
Title: structure of human ist1(ntd) - (residues 1-189)(p21)
Author: h. l. schubert, c. p. hill, m. bajorek, w. i. sundquist
Keywords: escrt-iii, chmp, ist1, alternative splicing, phosphoprotein, protein binding
- 3frs.pdb.
protein binding 08-jan-09 3frs
Title: structure of human ist1(ntd) (residues 1-189)(p43212)
Author: h. l. schubert, c. p. hill, m. bajorek, w. i. sundquist
Keywords: escrt-iii, ist1, alternative splicing, phosphoprotein, protein binding
- 3frt.pdb.
protein transport 08-jan-09 3frt
Title: the structure of human chmp3 (residues 8 - 222).
Author: h. l. schubert, j. mccullough, c. p. hill, w. i. sundquist
Keywords: escrt-111, chmp, ist1, coiled coil, cytoplasm, lipoprotein, membrane, myristate, phosphoprotein, protein transport, transport
- 3frv.pdb.
protein transport 08-jan-09 3frv
Title: structure of human chmp3 (residues 1-150)
Author: c. p. hill, h. l. schubert, j. mccullough, w. i. sundquist
Keywords: escrt-iii, chmp, ist1, coiled coil, cytoplasm, lipoprotein, membrane, myristate, phosphoprotein, protein transport, transport
- 3fts.pdb.
hydrolase 13-jan-09 3fts
Zn Yb
Title: leukotriene a4 hydrolase in complex with resveratrol
Author: d. r. davies
Keywords: polymorphism, protease, zinc
- 3ftu.pdb.
hydrolase 13-jan-09 3ftu
Zn Yb
Title: leukotriene a4 hydrolase in complex with dihydroresveratrol
Author: d. r. davies
Keywords: polymorphism, protease, zinc
- 3ftv.pdb.
hydrolase 13-jan-09 3ftv
Zn Yb
Title: leukotriene a4 hydrolase in complex with fragment n- (pyridin-3-ylmethyl)aniline
Author: d. r. davies
Keywords: protease, zinc
- 3ftw.pdb.
hydrolase 13-jan-09 3ftw
Zn Yb
Title: leukotriene a4 hydrolase in complex with fragments n- (pyridin-3-ylmethyl)aniline and acetate
Author: d. r. davies
Keywords: protease, zinc
- 3ftx.pdb.
hydrolase 13-jan-09 3ftx
Zn Yb
Title: leukotriene a4 hydrolase in complex with dihydroresveratrol and bestatin
Author: d. r. davies
Keywords: protease, zinc
- 3fty.pdb.
hydrolase 13-jan-09 3fty
Zn Yb
Title: leukotriene a4 hydrolase in complex with fragment 3- (benzyloxy)pyridin-2-amine
Author: d. r. davies
Keywords: protease, zinc
- 3fu0.pdb.
hydrolase 13-jan-09 3fu0
F Zn Yb
Title: leukotriene a4 hydrolase in complex with fragment 4-(4- fluorobenzoyl)pyridine
Author: d. r. davies
Keywords: protease, zinc
- 3fu1.pdb.
protein transport 13-jan-09 3fu1
Zn Ca
Title: crystal structure of the major pseudopilin from the type 2 secretion system of vibrio cholerae
Author: k. v. korotkov, m. d. gray, a. kreger, s. turley, m. sandkvist, w. g. j. hol
Keywords: major pilin, protein transport, complex, methylation, transport
- 3fu3.pdb.
hydrolase 13-jan-09 3fu3
Zn Yb
Title: leukotriene a4 hydrolase in complex with fragment 4-(2- amino-1,3-thiazol-4-yl)phenol
Author: d. r. davies
Keywords: protease, zinc
- 3fu5.pdb.
hydrolase 14-jan-09 3fu5
Zn Yb
Title: leukotriene a4 hydrolase in complex with (5-thiophen-2- ylthiophen-2-yl)methylamine
Author: d. r. davies
Keywords: protease, zinc
- 3fu6.pdb.
hydrolase 14-jan-09 3fu6
Zn Yb
Title: leukotriene a4 hydrolase in complex with fragment (4- thiophen-2-ylphenyl)methanamine
Author: d. r. davies
Keywords: protease, zinc
- 3fud.pdb.
hydrolase 14-jan-09 3fud
Zn Yb
Title: leukotriene a4 hydrolase in complex with n-methyl-1-(2- thiophen-2-ylphenyl)methanamine
Author: d. r. davies
Keywords: protease, zinc
- 3fue.pdb.
hydrolase 14-jan-09 3fue
Cl Zn Yb
Title: leukotriene a4 hydrolase in complex with fragment 5- chloroindole and bestatin
Author: d. r. davies
Keywords: protease, zinc
- 3fuf.pdb.
hydrolase 14-jan-09 3fuf
F Zn Yb
Title: leukotriene a4 hydrolase in complex with fragment 5- fluoroindole and bestatin
Author: d. r. davies
Keywords: protease, zinc
- 3fuh.pdb.
hydrolase 14-jan-09 3fuh
Zn Yb
Title: leukotriene a4 hydrolase in complex with fragment 5- hydroxyindole and bestatin
Author: d. r. davies
Keywords: protease, zinc
- 3fui.pdb.
hydrolase 14-jan-09 3fui
Zn Yb
Title: leukotriene a4 hydrolase in complex with n-benzyl-4-[(2r)- pyrrolidin-2-ylmethoxy]aniline
Author: d. r. davies
Keywords: protease, zinc
- 3fuj.pdb.
hydrolase 14-jan-09 3fuj
Zn Yb
Title: leukotriene a4 hydrolase in complex with 5-[2-(1h-pyrrol-1- yl)ethoxy]-1h-indole
Author: d. r. davies
Keywords: protease, zinc
- 3fuk.pdb.
hydrolase 14-jan-09 3fuk
Zn Yb
Title: leukotriene a4 hydrolase in complex with 1-[2-(1h-indol-5- yloxy)ethyl]piperidine-4-carboxylic acid
Author: d. r. davies
Keywords: protease, zinc
- 3fum.pdb.
hydrolase 14-jan-09 3fum
Zn Yb
Title: leukotriene a4 hydrolase in complex with (r)-pyridin-4-yl[4- (2-pyrrolidin-1-ylethoxy)phenyl]methanol
Author: d. r. davies
Keywords: protease, zinc
- 3fun.pdb.
hydrolase 14-jan-09 3fun
Zn Yb
Title: leukotriene a4 hydrolase in complex with {4-[(2r)- pyrrolidin-2-ylmethoxy]phenyl}(4-thiophen-3-ylphenyl) methanone
Author: d. r. davies
Keywords: protease, zinc
- 3fve.pdb.
isomerase 15-jan-09 3fve
Title: crystal structure of diaminopimelate epimerase mycobacterium tuberculosis dapf
Author: v. usha, l. g. dover, d. i. roper, k. futterer, g. s. besra
Keywords: amino-acid biosynthesis, cytoplasm, isomerase, lysine biosynthesis
- 3g20.pdb.
protein transport 30-jan-09 3g20
Na Ca
Title: crystal structure of the major pseudopilin from the type 2 secretion system of enterohaemorrhagic escherichia coli
Author: k. v. korotkov, m. d. gray, a. kreger, s. turley, m. sandkvist, w. g. j. hol
Keywords: major pilin, protein transport, complex
- 3g4d.pdb.
lyase 03-feb-09 3g4d
Title: crystal structure of (+)-delta-cadinene synthase from gossypium arboreum and evolutionary divergence of metal binding motifs for catalysis
Author: h. a. gennadios, l. di costanzo, d. j. miller, r. k. allemann, d. w. christianson
Keywords: lyase, magnesium, metal-binding
- 3g4f.pdb.
lyase 03-feb-09 3g4f
Mg F
Title: crystal structure of (+)- -cadinene synthase from gossypium arboreum in complex with 2-fluorofarnesyl diphosphate
Author: h. a. gennadios, l. di costanzo, d. w. christianson
Keywords: lyase, magnesium, metal-binding
- 3g65.pdb.
cell cycle 06-feb-09 3g65
Title: crystal structure of the human rad9-rad1-hus1 dna damage checkpoint complex
Author: a. s. dore, m. l. kilkenny, n. j. rzechorzek, l. h. pearl
Keywords: dna binding clamp, dna damage, dna repair, exonuclease, hydrolase, nuclease, nucleus, phosphoprotein, polymorphism, alternative splicing, cytoplasm, cell cycle
- 3g67.pdb.
signaling protein 06-feb-09 3g67
Title: crystal structure of a soluble chemoreceptor from thermotoga maritima
Author: a. m. pollard, a. m. bilwes, b. r. crane
Keywords: methyl-accepting chemotaxis protein, signaling protein
- 3g6b.pdb.
signaling protein 06-feb-09 3g6b
Title: crystal structure of a soluble chemoreceptor from thermotoga maritima asn217ile mutant
Author: a. m. pollard, a. m. bilwes, b. r. crane
Keywords: methyl-accepting chemotaxis protein, signaling protein
- 3gb4.pdb.
electron transport, oxidoreductase 18-feb-09 3gb4
Cl Co Fe
Title: crystal structure of dicamba monooxygenase with non-heme cobalt and dicamba
Author: t. j. rydel, e. j. sturman, f. moshiri, g. r. brown, y. qi
Keywords: electron transport, oxidoreductase, 2fe-2s, iron, iron-sulfur, metal-binding
- 3gb5.pdb.
oxidoreductase 18-feb-09 3gb5
Title: crystal structure of mus musculus iodotyrosine deiodinase (iyd) bound to fmn
Author: s. r. thomas, p. m. mctamney, j. m. adler, n. laronde-leblanc, s. e. rokita
Keywords: iodide salvage, flavoprotein, fmn, membrane, nadp, oxidoreductase, transmembrane
- 3gd0.pdb.
hydrolase 23-feb-09 3gd0
Title: crystal structure of laminaripentaose-producing beta-1,3- glucanase
Author: h. m. wu, m. t. hsu, s. w. liu, c. c. lai, y. k. li, w. c. wang
Keywords: laminaripentaose-producing beta-1,3- glucnase, multi-wavelength anomalous dispersion (mad) method
- 3gd3.pdb.
oxidoreductase 23-feb-09 3gd3
Title: crystal structure of a naturally folded murine apoptosis inducing factor
Author: i. f. sevrioukova
Keywords: acetylation, apoptosis, dna-binding, fad, flavoprotein, mitochondrion, nucleus, oxidoreductase, phosphoprotein, transit peptide
- 3gd4.pdb.
oxidoreductase 23-feb-09 3gd4
Title: crystal structure of the reduced, nad-bound form of murine apoptosis inducing factor
Author: i. f. sevrioukova
Keywords: acetylation, apoptosis, dna-binding, fad, flavoprotein, mitochondrion, nucleus, oxidoreductase, phosphoprotein, transit peptide
- 3gd9.pdb.
hydrolase 23-feb-09 3gd9
Title: crystal structure of laminaripentaose-producing beta-1,3- glucanase in complex with laminaritetraose
Author: h. m. wu, m. t. hsu, s. w. liu, c. c. lai, y. k. li, w. c. wang
Keywords: laminaripentaose-producing beta-1,3- glucnase (lphase), multi-wavelength anomalous dispersion (mad)
- 3gdh.pdb.
transferase 24-feb-09 3gdh
Title: methyltransferase domain of human trimethylguanosine synthase 1 (tgs1) bound to m7gtp and adenosyl-homocysteine (active form)
Author: t. monecke, a. dickmanns, r. ficner
Keywords: cap, dimethyltransferase, usnrna, snorna, telomerase, cytoplasm, methyltransferase, nucleus, phosphoprotein, polymorphism, transcription, transcription regulation, transferase
- 3ge3.pdb.
oxidoreductase 24-feb-09 3ge3
Cl Fe
Title: crystal structure of the reduced toluene 4-monooxygenase hd t201a mutant complex
Author: n. l. elsen, l. j. bailey, b. g. fox
Keywords: effector protein, t201a, aromatic hydrocarbons catabolism, fad, flavoprotein, iron, monooxygenase, oxidoreductase
- 3ge8.pdb.
oxidoreductase 25-feb-09 3ge8
Fe
Title: toluene 4-monooxygenase hd t201a diferric, resting state complex
Author: n. l. elsen, l. j. bailey, a. d. hauser, b. g. fox
Keywords: effector protein, t4moh, t201a, aromatic hydrocarbons catabolism, fad, flavoprotein, iron, monooxygenase, oxidoreductase
- 3gf3.pdb.
lyase 26-feb-09 3gf3
Cl
Title: glutaconyl-coa decarboxylase a subunit from clostridium symbiosum co-crystallized with glutaconyl-coa
Author: d. kress, d. brugel, w. buckel, l. -o. essen
Keywords: sodium ion transport, biotin, glutamate fermentation, lyase
- 3gf7.pdb.
lyase 26-feb-09 3gf7
Title: glutaconyl-coa decarboxylase a subunit from clostridium symbiosum apoprotein
Author: d. kress, d. brugel, w. buckel, l. -o. essen
Keywords: sodium ion transport, biotin, glutamate fermentation, lyase
- 3gfd.pdb.
oxidoreductase 26-feb-09 3gfd
I
Title: crystal structure of mus musculus iodotyrosine deiodinase (iyd) bound to fmn and mono-iodotyrosine (mit)
Author: s. r. thomas, p. m. mctamney, j. m. adler, n. laronde-leblanc, s. e. rokita
Keywords: iodide salvage, flavoprotein, mono-iodotyrosine, mit, fmn, membrane, nadp, oxidoreductase, transmembrane
- 3gh8.pdb.
oxidoreductase 03-mar-09 3gh8
I
Title: crystal structure of mus musculus iodotyrosine deiodinase (iyd) bound to fmn and di-iodotyrosine (dit)
Author: s. r. thomas, p. m. mctamney, j. m. adler, n. laronde-leblanc, s. e. rokita
Keywords: iodide salvage, flavoprotein, di-iodotyrosine, dit, fmn, membrane, nadp, oxidoreductase, transmembrane
- 3glm.pdb.
lyase 12-mar-09 3glm
Cl
Title: glutaconyl-coa decarboxylase a subunit from clostridium symbiosum co-crystallized with crotonyl-coa
Author: d. kress, d. brugel, w. buckel, l. -o. essen
Keywords: sodium ion transport, biotin, glutamate fermentation, lyase
- 3glp.pdb.
rna 12-mar-09 3glp
Title: 1.23 a resolution x-ray structure of (gcugcugc)2
Author: a. kiliszek, r. kierzek, w. j. krzyzosiak, w. rypniewski
Keywords: rna, myotonic dystrophy, cug repeats
- 3glz.pdb.
hormone 12-mar-09 3glz
F
Title: human transthyretin (ttr) complexed with(e)-3-(2- (trifluoromethyl)benzylideneaminooxy)propanoic acid (inhibitor 11)
Author: n. n. mohamedmohaideen, s. k. palaninathan, e. orlandini, j. c. sacchettini
Keywords: vitamin a
- 3gm7.pdb.
rna 13-mar-09 3gm7
Title: 1.58 a resolution x-ray structure of (cug)6
Author: a. kiliszek, r. kierzek, w. j. krzyzosiak, w. rypniewski
Keywords: rna, myotonic dystrophy, cug repeats
- 3gma.pdb.
lyase 13-mar-09 3gma
Title: glutaconyl-coa decarboxylase a subunit from clostridium symbiosum co-crystallized with glutaryl-coa
Author: d. kress, d. brugel, w. buckel, l. -o. essen
Keywords: sodium ion transport, biotin, glutamate fermentation, lyase
- 3gn9.pdb.
protein transport 16-mar-09 3gn9
Ca
Title: crystal structure of the major pseudopilin from the type 2 secretion system of vibrio vulnificus
Author: k. v. korotkov, m. d. gray, a. kreger, s. turley, m. sandkvist, w. g. j. hol
Keywords: major pilin, protein transport, complex, methylation
- 3gny.pdb.
antimicrobial protein 18-mar-09 3gny
Cl
Title: crystal structure of human alpha-defensin 1 (hnp1)
Author: m. pazgier, w. lu
Keywords: human alpha defensin 1, human neutrophil peptide 1, hnp1, antibiotic, antimicrobial, antiviral defense, defensin, disulfide bond, fungicide, phosphoprotein, secreted, antimicrobial protein
- 3go0.pdb.
antimicrobial protein 18-mar-09 3go0
Cl
Title: crystal structure of d-enantiomer of human alpha-defensin 1 (d-hnp1)
Author: m. pazgier, w. lu
Keywords: d-enantiomer of human alpha defensin 1,d-enantiomer of human neutrophil peptide 1, d-hnp1, antimicrobial protein
- 3go3.pdb.
dna 18-mar-09 3go3
Mn
Title: interactions of an echinomycin-dna complex with manganese(ii) ions
Author: r. pfoh, j. a. cuesta-seijo, g. m. sheldrick
Keywords: manganese ions, echinomycin
- 3gob.pdb.
electron transport, oxidoreductase 18-mar-09 3gob
Cl Co Fe
Title: crystal structure of dicamba monooxygenase with non-heme cobalt and dcsa
Author: t. j. rydel, e. j. sturman, f. moshiri, g. r. brown, y. qi
Keywords: electron transport, oxidoreductase
- 3gov.pdb.
hydrolase 20-mar-09 3gov
Title: crystal structure of the catalytic region of human masp-1
Author: v. harmat, j. dobo, l. beinrohr, e. sebestyen, p. zavodszky, p. gal
Keywords: serine protease, beta barrel, hydrolase, hydroxylation, immune response, innate immunity, sushi, coagulation, complement pathway, disulfide bond, egf-like domain, glycoprotein, polymorphism, protease
- 3gqz.pdb.
hydrolase/hydrolase inhibitor 24-mar-09 3gqz
Title: ampc beta-lactamase in complex with fragment-based inhibitor
Author: d. t. teotico, b. k. shoichet
Keywords: lactamase, fragment, antibiotic resistance, periplasm, hydrolase/hydrolase inhibitor complex
- 3gr2.pdb.
hydrolase/hydrolase inhibitor 24-mar-09 3gr2
Title: ampc beta-lactamase in complex with fragment-based inhibitor
Author: d. t. teotico, b. k. shoichet
Keywords: ampc, lactamase, fragment, antibiotic resistance, periplasm, hydrolase/hydrolase inhibitor complex
- 3gre.pdb.
signaling protein,protein binding 25-mar-09 3gre
Title: crystal structure of saccharomyces cerevisiae vps15 wd repeat domain
Author: j. l. vanhooke, j. sondek, l. betts
Keywords: transferase, transport, signaling protein,protein binding
- 3grf.pdb.
transferase 25-mar-09 3grf
Ni
Title: x-ray structure of ornithine transcarbamoylase from giardia lamblia
Author: a. galkin, o. herzberg
Keywords: ornithine carbamoyltransferase, arginine degradation pathway, giardia lamblia, drug target, x-ray structure, transferase
- 3grj.pdb.
hydrolase/hydrolase inhibitor 25-mar-09 3grj
Title: ampc beta-lactamase in complex with fragment-based inhibitor
Author: d. t. teotico, b. k. shoichet
Keywords: antibiotic resistance, hydrolase, periplasm
- 3gs0.pdb.
hormone 26-mar-09 3gs0
Title: human transthyretin (ttr) complexed with (s)-3-(9h-fluoren- 9-ylideneaminooxy)-2-methylpropanoic acid (inhibitor 16)
Author: n. n. mohamedmohaideen, s. k. palaninathan, e. orlandini, j. c. sacchettini
Keywords: transport, vitamin a
- 3gs4.pdb.
hormone 26-mar-09 3gs4
Title: human transthyretin (ttr) complexed with 3-(9h-fluoren-9- ylideneaminooxy)propanoic acid (inhibitor 15)
Author: n. n. mohamedmohaideen, s. k. palaninathan, e. orlandini, j. c. sacchettini
Keywords: transport, vitamin a
- 3gs7.pdb.
hormone 26-mar-09 3gs7
Title: human transthyretin (ttr) complexed with (e)-3-(2- methoxybenzylideneaminooxy)propanoic acid (inhibitor 13)
Author: n. n. mohamedmohaideen, s. k. palaninathan, e. orlandini, j. c. sacchettini
Keywords: transport, vitamin a
- 3gsg.pdb.
hydrolase/hydrolase inhibitor 26-mar-09 3gsg
Title: ampc beta-lactamase in complex with fragment-based inhibitor
Author: d. t. teotico, b. k. shoichet
Keywords: antibiotic resistance, periplasm, hydrolase/hydrolase inhibitor complex
- 3gsz.pdb.
transferase 27-mar-09 3gsz
Title: structure of the genotype 2b hcv polymerase
Author: e. h. rydberg, a. carfi
Keywords: hcv, transferase
- 3gtc.pdb.
hydrolase/hydrolase inhibitor 27-mar-09 3gtc
Title: ampc beta-lactamase in complex with fragment-based inhibitor
Author: d. t. teotico, b. k. shoichet
Keywords: antibiotic resistance, periplasm, hydrolase/hydrolase inhibitor complex
- 3gte.pdb.
electron transport, oxidoreductase 27-mar-09 3gte
Fe
Title: crystal structure of dicamba monooxygenase with non-heme iron
Author: t. j. rydel, e. j. sturman, f. moshiri, g. r. brown, y. qi
Keywords: electron transport, oxidoreductase
- 3gts.pdb.
electron transport, oxidoreductase 28-mar-09 3gts
Cl Fe
Title: crystal structure of dicamba monooxygenase with non-heme iron and dicamba
Author: t. j. rydel, e. j. sturman, f. moshiri, g. r. brown, y. qi
Keywords: electron transport, oxidoreductase
- 3gv2.pdb.
viral protein 30-mar-09 3gv2
Title: x-ray structure of hexameric hiv-1 ca
Author: b. n. kelly
Keywords: viral protein
- 3gv9.pdb.
hydrolase/hydrolase inhibitor 30-mar-09 3gv9
Title: ampc beta-lactamase in complex with fragment-based inhibitor
Author: d. t. teotico, b. k. shoichet
Keywords: antibiotic resistance, periplasm, hydrolase/hydrolase inhibitor complex
- 3gva.pdb.
dna binding protein 30-mar-09 3gva
Title: crystal structure analysis of s. pombe atl
Author: j. l. tubbs, a. s. arvai, j. a. tainer
Keywords: dna damage, dna repair, dna- binding, dna binding protein
- 3gvb.pdb.
hydrolase/hydrolase inhibitor 30-mar-09 3gvb
Title: ampc beta-lactamase in complex with fragment-based inhibitor
Author: d. t. teotico, b. k. shoichet
Keywords: antibiotic resistance, periplasm, hydrolase/hydrolase inhibitor complex
- 3gvn.pdb.
rna 31-mar-09 3gvn
Mg
Title: the 1.2 angstroem crystal structure of an e.coli trnaser acceptor stem microhelix reveals two magnesium binding sites
Author: a. eichert, j. p. furste, a. schreiber, m. perbandt, c. betzel, v. a. erdmann, c. forster
Keywords: trna acceptor stem microhelix, x-ray structure, identity elements, rna hydration, magnesium binding sites
- 3gx0.pdb.
transferase 01-apr-09 3gx0
Title: crystal structure of gsh-dependent disulfide bond oxidoreductase
Author: j. e. ladner, j. m. harp, m. c. wadington, r. n. armstrong
Keywords: glutathione, glutathione disulfide, disulfide bond oxidoreductase
- 3gx4.pdb.
dna binding protein/dna 01-apr-09 3gx4
Co
Title: crystal structure analysis of s. pombe atl in complex with dna
Author: j. l. tubbs, a. s. arvai, j. a. tainer
Keywords: dna damage, dna repair, dna-binding, dna binding protein/dna complex
- 3gyh.pdb.
dna binding protein/dna 03-apr-09 3gyh
Title: crystal structure analysis of s. pombe atl in complex with damaged dna containing pob
Author: j. l. tubbs, a. s. arvai, j. a. tainer, d. s. shin
Keywords: dna repair, dna-binding, dna binding protein/dna complex
- 3gz5.pdb.
dna binding protein 06-apr-09 3gz5
Na
Title: crystal structure of shewanella oneidensis nrtr
Author: n. huang, h. zhang
Keywords: nudix domain, whth domain
- 3gz6.pdb.
dna binding protein/dna 06-apr-09 3gz6
Na
Title: crystal structure of shewanella oneidensis nrtr complexed with a 27mer dna
Author: n. huang, h. zhang
Keywords: nudix domain, whth domain, dna binding protein/dna complex
- 3gz8.pdb.
dna binding protein 06-apr-09 3gz8
Title: cocrystal structure of nudix domain of shewanella oneidensis nrtr complexed with adp ribose
Author: n. huang, h. zhang
Keywords: nudix domain, whth domain
- 3h2u.pdb.
cell adhesion 14-apr-09 3h2u
Title: human raver1 rrm1, rrm2, and rrm3 domains in complex with human vinculin tail domain vt
Author: j. h. lee, e. s. rangarajan, s. d. yogesha, t. izard
Keywords: actin cytoskeleton, rnp motif, rna binding, alternative splicing, cytoplasm, nucleus, phosphoprotein, rna-binding, cell adhesion
- 3h2v.pdb.
cell adhesion 14-apr-09 3h2v
Title: human raver1 rrm1 domain in complex with human vinculin tail domain vt
Author: j. h. lee, e. s. rangarajan, s. d. yogesha, t. izard
Keywords: actin cytoskeleton, rnp motif, rna binding, alternative splicing, cytoplasm, nucleus, phosphoprotein, rna-binding, cell adhesion
- 3h32.pdb.
blood clotting 15-apr-09 3h32
Ca
Title: crystal structure of d-dimer from human fibrin complexed with gly-his-arg-pro-tyr-amide
Author: r. f. doolittle, l. pandi
Keywords: secreted, pyrrolidone carboxylic acid, calcium, sulfation, cdna flj75335, transcript variant gamma-a, mrna, isoform cra_m
- 3h40.pdb.
replication/dna 17-apr-09 3h40
Br
Title: binary complex of human dna polymerase iota with template u/t
Author: r. jain, d. t. nair, r. e. johnson, l. prakash, s. prakash, a. k. aggarwal
Keywords: schiff base, transferase, replication/dna complex
- 3h47.pdb.
viral protein 18-apr-09 3h47
Title: x-ray structure of hexameric hiv-1 ca
Author: o. pornillos
Keywords: hexamer, engineered disulfide bonds, viral protein
- 3h4e.pdb.
viral protein 19-apr-09 3h4e
Title: x-ray structure of hexameric hiv-1 ca
Author: o. pornillos
Keywords: hexamer, engineered disulfide bonds, viral protein
- 3h7o.pdb.
hydrolase 28-apr-09 3h7o
Title: crystal structure of scabies mite inactivated protease paralogue s-i1 (smipp-s-i1)
Author: a. m. buckle
- 3h7t.pdb.
hydrolase 28-apr-09 3h7t
Zn
Title: crystal structure of scabies mite inactivated protease paralogue s-d1 (smipp-s-d1)
Author: a. m. buckle
- 3h88.pdb.
transferase 29-apr-09 3h88
Cl Mg Ca Se
Title: crystal structure of 4'-phosphopantetheinyl transferase acps from vibrio cholerae o1 biovar eltor
Author: y. kim, m. zhou, k. kwon, w. f. anderson, a. joachimiak, center for structural genomics of infectious diseases (csgid)
Keywords: structural genomics of infectious diseases, cytoplasm, fatty acid biosynthesis, lipid synthesis, magnesium, metal-binding, transferase, center for structural genomics of infectious diseases, csgid
- 3hab.pdb.
hydrolase/hydrolase inhibitor 01-may-09 3hab
F Na
Title: the structure of dpp4 in complex with piperidine fused benzimidazole 25
Author: g. scapin
Keywords: hydrolase/hydrolase inhibitor complex
- 3hac.pdb.
hydrolase/hydrolase inhibitor 01-may-09 3hac
F Na
Title: the structure of dpp-4 in complex with piperidine fused imidazopyridine 34
Author: g. scapin
Keywords: hydrolase/hydrolase inhibitor complex
- 3hbw.pdb.
hormone 05-may-09 3hbw
Title: crystal structure of human fibroblast growth factor homologous factor 2a (fhf2a), also referred to as fibroblast growth factor 13a (fgf13a)
Author: m. mohammadi
Keywords: alternative splicing, growth factor, polymorphism, hormone
- 3hdm.pdb.
transferase 07-may-09 3hdm
Title: crystal structure of serum and glucocorticoid-regulated kinase 1 in complex with compound 1
Author: b. zhao, m. hammond
Keywords: polymorphism
- 3hdn.pdb.
transferase 07-may-09 3hdn
Title: crystal structure of serum and glucocorticoid-regulated kinase 1 in complex with compound 2
Author: b. zhao, m. hammond
Keywords: polymorphism
- 3hei.pdb.
transferase/signaling protein 08-may-09 3hei
Title: ligand recognition by a-class eph receptors: crystal structures of the epha2 ligand-binding domain and the epha2/ephrin-a1 complex
Author: j. p. himanen, y. goldgur, h. miao, e. myshkin, h. guo, m. buck, m. nguyen, k. r. rajashankar, b. wang, d. b. nikolov
Keywords: transferase, transmembrane, tyrosine-protein kinase, transferase/signaling protein complex
- 3hh8.pdb.
metal binding protein 15-may-09 3hh8
Fe
Title: crystal structure and metal binding properties of the lipoprotein mtsa
Author: e. n. baker, h. m. baker, x. sun, q. -y. ye
Keywords: metal binding, cell membrane, copper, copper transport, ion transport, iron, iron transport, membrane, metal-binding, palmitate, transport, zinc, zinc transport, metal binding protein
- 3hha.pdb.
hydrolase 15-may-09 3hha
Title: crystal structure of cathepsin l in complex with az12878478
Author: n. asaad, p. a. bethel, m. d. coulson, j. dawson, s. j. ford, s. gerhardt, m. grist, g. a. hamlin, m. j. james, e. v. jones, g. i. karoutchi, p. w. kenny, a. d. morley, k. oldham, n. rankine, d. ryan, s. l. wells, l. wood, m. augustin, s. krapp, h. simader, s. steinbacher
Keywords: cathepsin l, inhibitors, disulfide bond, glycoprotein, hydrolase, lysosome, protease, thiol protease, zymogen
- 3hl5.pdb.
ligase 26-may-09 3hl5
Zn
Title: crystal structure of xiap bir3 with cs3
Author: s. g. hymowitz
Keywords: ubl conjugation, ubl conjugation pathway, zinc, zinc-finger
- 3hpn.pdb.
transferase 04-jun-09 3hpn
Title: ligand recognition by a-class eph receptors: crystal structures of the epha2 ligand-binding domain and the epha2/ephrin-a1 complex
Author: j. p. himanen, y. goldgur, h. miao, e. myshkin, h. guo, m. buck, m. nguyen, k. r. rajashankar, b. wang, d. b. nikolov
Keywords: ephrin, atp-binding, glycoprotein, kinase, membrane, nucleotide-binding, phosphoprotein, polymorphism, receptor, transferase, transmembrane, tyrosine-protein kinase
- 3hy3.pdb.
ligase 22-jun-09 3hy3
Mg Ni
Title: structure of human mthfs with 10-formyltetrahydrofolate
Author: d. wu, y. li, g. song, c. cheng, n. shaw, z. -j. liu
Keywords: cancer, 10-formyltetrahydrofolate, acetylation, atp-binding, cytoplasm, folate-binding, ligase, magnesium, nucleotide-binding, polymorphism
- 3hy4.pdb.
ligase 22-jun-09 3hy4
Mg Ni
Title: structure of human mthfs with n5-iminium phosphate
Author: d. wu, y. li, g. song, c. cheng, n. shaw, z. -j. liu
Keywords: cancer, n5-iminium phosphate, acetylation, atp- binding, cytoplasm, folate-binding, ligase, magnesium, nucleotide-binding, polymorphism
- 3hzf.pdb.
transcription 23-jun-09 3hzf
As
Title: structure of tr-alfa bound to selective thyromimetic gc-1 in c2 space group
Author: r. aparicio, l. bleicher, i. polikarpov
Keywords: ligand binding domain, dna-binding, metal- binding, nucleus, receptor, transcription, transcription regulation, zinc, zinc-finger
- 3hzs.pdb.
transferase 24-jun-09 3hzs
Title: s. aureus monofunctional glycosyltransferase (mtga)in complex with moenomycin
Author: h. heaslet, a. a. miller, b. shaw, a. mistry
Keywords: peptidoglycan, monofunctional, moenomycin, cell membrane, cell shape, cell wall biogenesis/degradation, glycosyltransferase, membrane, peptidoglycan synthesis, transferase, transmembrane
- 4gal.pdb.
lectin 13-jul-98 4gal
Title: crystal structure of human galectin-7 in complex with lactose
Author: d. d. leonidas, k. r. acharya
Keywords: lectin, galectin, carbohydrate binding
- 6cel.pdb.
hydrolase 24-sep-97 6cel
Co
Title: cbh1 (e212q) cellopentaose complex
Author: c. divne, j. stahlberg, t. a. jones
Keywords: cellulose degradation, glycosidase, glycoprotein, glycosylated protein
- 7cel.pdb.
hydrolase 24-sep-97 7cel
Co
Title: cbh1 (e217q) in complex with cellohexaose and cellobiose
Author: c. divne, j. stahlberg, t. a. jones
Keywords: cellulose degradation, glycosidase, glycoprotein, glycosylated protein
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