Recent PDB releases or updates: week of 29 May 2009

• 178d.pdb. dna 19-may-94 178d
  Title: crystal structure of a dna duplex containing 8- hydroxydeoxyguanine.adenine base-pairs
  Author: k. e. mcauley-hecht, g. a. leonard, n. j. gibson, j. b. thomson, w. p. watson, w. n. hunter, t. brown
  Keywords: double helix, modified, mismatched
  
• 1bav.pdb. carboxypeptidase 14-nov-96 1bav Zn
  Title: carboxypeptidase a complexed with 2-benzyl-3-iodo-propanoic acid (bip)
  Author: p. martin, b. edwards
  Keywords: carboxypeptidase, zinc, zymogen, signal
  
• 1da3.pdb. dna 09-nov-92 1da3 Cl Mg
  Title: the crystal structure of the trigonal decamer c-g-a-t-c-g- 6mea-t-c-g: a b-dna helix with 10.6 base-pairs per turn
  Author: i. baikalov, k. grzeskowiak, k. yanagi, j. quintana, r. e. dickerson
  Keywords: double helix, modified
  
• 1zsp.pdb. oxidoreductase 24-may-05 1zsp Mn
  Title: contribution to structure and catalysis of tyrosine 34 in human manganese superoxide dismutase
  Author: a. s. hearn, j. j. perry, d. e. cabelli, j. a. tainer, h. s. nick, d. s. silverman
  Keywords: manganese superoxide dismutase, y34a mutation, oxidoreductase
  
• 1zte.pdb. oxidoreductase 26-may-05 1zte Mn
  Title: contribution to structure and catalysis of tyrosine 34 in human manganese suerpoxide dismutase
  Author: a. s. hearn, j. j. perry, d. e. cabelii, j. a. tainer, h. s. nick, d. s. silverman
  Keywords: manganese superoxide dismutase, y34h mutation, oxidoreductase
  
• 1zua.pdb. oxidoreductase 30-may-05 1zua F
  Title: crystal structure of akr1b10 complexed with nadp+ and tolrestat
  Author: o. gallego, f. x. ruiz, a. ardevol, m. dominguez, r. alvarez, a. r. de lera, c. rovira, j. farres, i. fita, x. pares
  Keywords: aldo-keto reductase, oxidoreductase
  
• 2cwr.pdb. hydrolase 24-jun-05 2cwr
  Title: crystal structure of chitin biding domain of chitinase from pyrococcus furiosus
  Author: k. uegaki, t. nakamura, k. ishikawa, h. matsumura
  Keywords: chitin-binding domain, pyrococcus furiosus, endoglucanase, chitin, hyperthermophilic, hydrolase
  
• 2czn.pdb. hydrolase 13-jul-05 2czn He Hg (solution NMR)
  Title: solution structure of the chitin-binding domain of hyperthermophilic chitinase from pyrococcus furiosus
  Author: t. uegaki, t. ikegami, t. nakamura, y. hagihara, s. mine, t. inoue, h. matsumura, m. ataka, k. ishikawa
  Keywords: pyrococcus furiosus, chitinase, hydrolase
  
• 2jxf.pdb. viral protein, membrane protein 19-nov-07 2jxf He Hg (solution NMR)
  Title: the solution structure of hcv ns4b(40-69)
  Author: r. montserret, f. penin
  Keywords: transferase, transmembrane, ubl conjugation, viral nucleoprotein, virion, zinc, viral protein, membrane protein
  
• 2k9j.pdb. membrane protein 15-oct-08 2k9j Hg (solution NMR)
  Title: integrin alphaiib-beta3 transmembrane complex
  Author: t. lau, c. kim, m. h. ginsberg, t. s. ulmer
  Keywords: host-virus interaction, phosphoprotein, membrane protein
  
• 2k9l.pdb. transcription 19-oct-08 2k9l He Hg (solution NMR)
  Title: structure of the core binding domain of sigma54
  Author: e. hong, d. wemmer
  Keywords: transcription
  
• 2k9m.pdb. transcription 19-oct-08 2k9m He Hg (solution NMR)
  Title: structure of the core binding domain of sigma54
  Author: e. hong, d. wemmer
  Keywords: transcription
  
• 2kar.pdb. dna 13-nov-08 2kar Ho (solution NMR)
  Title: hne-dg adduct mismatched with da in acidic solution
  Author: h. huang, h. wang, r. s. lloyd, c. j. rizzo, m. p. stone
  Keywords: mismatch, hydroxynonenal, dna
  
• 2kas.pdb. dna 13-nov-08 2kas Ho (solution NMR)
  Title: hne-dg adduct mismatched with da in basic solution
  Author: h. huang, h. wang, r. s. lloyd, c. j. rizzo, m. p. stone
  Keywords: mismatch, hydroxynonenal, dna
  
• 2kds.pdb. ribosomal protein 15-jan-09 2kds He Hg (solution NMR)
  Title: structure of ribosomal protien l14e from sulfolobus solfataricus
  Author: s. p. edmondson, j. w. shriver
  Keywords: hyperthmophile, sh3, ribonucleoprotein, ribosomal protein
  
• 2ke1.pdb. gene regulation 22-jan-09 2ke1 He Hg Zn (solution NMR)
  Title: molecular basis of non-modified histone h3 tail recognition by the first phd finger of autoimmune regulator
  Author: f. chignola, m. gaetani, a. rebane, t. org, l. mollica, c. zucchelli, a. spitaleri, v. mannella, p. peterson, g. musco
  Keywords: phd finger, histone h3, disease mutation, metal- binding, nucleus, transcription, transcription regulation, zinc, zinc-finger, gene regulation
  
• 2kft.pdb. transcription/protein binding 27-feb-09 2kft He Hg Zn (solution NMR)
  Title: nmr solution structure of the first phd finger domain of human autoimmune regulator (aire) in complex with histone h3(1-20cys) peptide
  Author: s. chakravarty, l. zeng, m. zhou
  Keywords: zinc-finger, chromosomal protein, nucleosome core, transcription/protein binding complex
  
• 2kgk.pdb. oxidoreductase 12-mar-09 2kgk He Hg Ho (solution NMR)
  Title: solution structure of bacillus anthracis dihydrofolate reductase
  Author: l. deshmukh, o. vinogradova, j. m. beierlein, k. m. frey, a. c. anderson
  Keywords: oxidoreductase
  
• 2ki8.pdb. oxidoreductase 28-apr-09 2ki8 He Hg (solution NMR)
  Title: solution nmr structure of tungsten formylmethanofuran dehydrogenase subunit d from archaeoglobus fulgidus, northeast structural genomics consortium target att7
  Author: a. eletsky, y. wu, a. yee, c. fares, h. w. lee, c. h. arrowsmith, j. h. prestegard, t. szyperski, g. t. montelione, northeast structural genomics consortium (nesg)
  Keywords: fwdd-2, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, oxidoreductase
  
• 2p4k.pdb. oxidoreductase 12-mar-07 2p4k Mn
  Title: contribution to structure and catalysis of tyrosine 34 in human manganese superoxide dismutase
  Author: j. j. perry
  Keywords: manganese superoxide dismutase, y34n mutation, oxidoreductase
  
• 2qua.pdb. hydrolase 04-aug-07 2qua Ca
  Title: crystal structure of lipa from serratia marcescens
  Author: r. meier, u. baumann
  Keywords: alpha/beta hydrolase, helical hairpin
  
• 2qub.pdb. hydrolase 04-aug-07 2qub Ca
  Title: crystal structure of extracellular lipase lipa from serratia marcescens
  Author: r. meier, u. baumann
  Keywords: alpha/beta hydrolase, helical hairpin
  
• 2r8k.pdb. replication, transferase/dna 11-sep-07 2r8k Pt Ca
  Title: structure of the eukaryotic dna polymerase eta in complex with 1,2-d(gpg)-cisplatin containing dna
  Author: t. carell, a. alt, k. lammens
  Keywords: replication, transferase/dna complex
  
• 2rpa.pdb. hydrolase 13-may-08 2rpa He Hg (solution NMR)
  Title: the solution structure of n-terminal domain of microtubule severing enzyme
  Author: n. iwaya, y. kuwahara, s. unzai, t. nagata, k. tomii, n. goda, h. tochio, m. shirakawa, h. hiroaki
  Keywords: atp-binding, cell cycle, cell division, cytoplasm, hydrolase, microtubule, microtubule severing enzyme, mitosis, nucleotide-binding
  
• 2rpb.pdb. membrane protein 13-may-08 2rpb He Hg (solution NMR)
  Title: the solution structure of membrane protein
  Author: y. kuwahara, s. unzai, t. nagata, h. hiroaki
  Keywords: spfh domain
  
• 2rpd.pdb. dna 15-may-08 2rpd Ho (solution NMR)
  Title: mhr1p-bound ssdna
  Author: t. masuda, y. ito, t. shibata, t. mikawa
  
  
• 2rpe.pdb. dna 15-may-08 2rpe Ho (solution NMR)
  Title: hsrad51-bound ssdna
  Author: t. masuda, y. ito, t. shibata, t. mikawa
  
  
• 2rpf.pdb. dna 15-may-08 2rpf Ho (solution NMR)
  Title: reco-bound ssdna
  Author: t. masuda, y. ito, t. shibata, t. mikawa
  
  
• 2rph.pdb. dna 15-may-08 2rph Ho (solution NMR)
  Title: rect-bound ssdna
  Author: t. masuda, y. ito, t. shibata, t. mikawa
  
  
• 2v4z.pdb. cell cycle 30-sep-08 2v4z Mg F Al
  Title: the crystal structure of the human g-protein subunit alpha ( gnai3) in complex with an engineered regulator of g- protein signaling type 2 domain (rgs2)
  Author: a. k. roos, m. soundararajan, a. c. w. pike, c. h. arrowsmith, j. weigelt, a. edwards, c. bountra, s. knapp
  Keywords: palmitate, myristate, transducer, cell cycle
  
• 2v5b.pdb. isomerase 02-oct-08 2v5b
  Title: the monomerization of triosephosphate isomerase from trypanosoma cruzi
  Author: r. arreola, a. torres-larios
  Keywords: unfolding, monotctim, isomerase, glycosome, gluconeogenesis, lipid synthesis, monomeric mutant, glycolysis, pentose shunt, monomerization, fatty acid biosynthesis, triosephosphate isomerase
  
• 2vid.pdb. hydrolase 30-nov-07 2vid
  Title: serine protease splb from staphylococcus aureus at 1.8a resolution
  Author: g. dubin, j. stec-niemczyk, m. kisielewska, k. pustelny, g. m. popowicz, m. bista, t. kantyka, k. t. boulware, h. r. stennicke, a. czarna, m. phopaisarn, p. s. daugherty, i. b. thogersen, j. j. enghild, n. thornberry, a. dubin, j. potempa
  Keywords: serine protease, staphylococcus aureus, hydrolase
  
• 2voy.pdb. hydrolase 25-feb-08 2voy Se (electron microscopy)
  Title: cryoem model of copa, the copper transporting atpase from archaeoglobus fulgidus
  Author: c. -c. wu, w. j. rice, d. l. stokes
  Keywords: cryo-em, helical reconstruction, membrane protein, copper transporter, metal binding domain, hydrolase
  
• 2vqx.pdb. hydrolase 20-mar-08 2vqx Zn
  Title: precursor of protealysin, metalloproteinase from serratia proteamaculans.
  Author: w. r. melik-adamyan, i. p. kuranova, k. m. polyakov, i. v. demidyuk, t. y. gromova, s. v. kostrov
  Keywords: zinc, protease, hydrolase, metalloprotease
  
• 2w0z.pdb. signaling protein 13-oct-08 2w0z
  Title: grb2 sh3c (3)
  Author: m. harkiolaki, t. tsirka, s. m. feller
  Keywords: polymorphism, phosphoprotein, golgi apparatus, alternative splicing, host-virus interaction, sh3c, grb2, signaling, sh2 domain, sh3 domain
  
• 2w2g.pdb. rna-binding protein 30-oct-08 2w2g
  Title: human sars coronavirus unique domain
  Author: j. tan, c. vonrhein, o. s. smart, g. bricogne, m. bollati, y. kusov, g. hansen, j. r. mesters, c. l. schmidt, r. hilgenfeld
  Keywords: rna replication, viral replicase, rna-binding, zinc-finger, metal-binding, transmembrane, ribosomal frameshifting, zinc, protease, membrane, hydrolase, cytoplasm, rna-binding protein
  
• 2w53.pdb. transcription 04-dec-08 2w53
  Title: structure of smet, the repressor of the stenotrophomonas maltophilia multidrug efflux pump smedef.
  Author: m. j. mate, a. romero, a. hernandez, j. l. martinez
  Keywords: multi-drug efflux pump, transcription regulation, transcriptional repressor, dna binding, tetr family, dna-binding, transcription
  
• 2w86.pdb. glycoprotein 09-jan-09 2w86 I Ca
  Title: crystal structure of fibrillin-1 domains cbegf9hyb2cbegf10, calcium saturated form
  Author: s. a. jensen, s. iqbal, e. d. lowe, c. redfield, p. a. handford
  Keywords: phosphoprotein, egf-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid, calcium, secreted, polymorphism, glycoprotein
  
• 2wav.pdb. transferase 16-feb-09 2wav He Hg (solution NMR)
  Title: the folding mechanism of bbl: plasticity of transition state structure observed within an ultrafast folding protein family
  Author: h. neuweiler, t. d. sharpe, t. j. rutherford, c. m. johnson, n. ferguson, a. r. fersht
  Keywords: temperature-jump fluorescence spectroscopy, ultrafast protein folding, transition state movement, transferase, acyltransferase, phi- value analysis
  
• 2wbn.pdb. viral protein 02-mar-09 2wbn Se
  Title: crystal structure of the g2p (large terminase) nuclease domain from the bacteriophage spp1
  Author: c. smits, m. chechik, o. v. kovalevskiy, m. b. shevtsov, a. w. foster, j. c. alonso, a. a. antson
  Keywords: nuclease, viral protein, dna packaging
  
• 2wby.pdb. hydrolase/hormone 06-mar-09 2wby Zn
  Title: crystal structure of human insulin-degrading enzyme in complex with insulin
  Author: m. manolopoulou, q. guo, e. malito, a. b. schilling, w. j. tang
  Keywords: human insulin-degradng enzyme, hydrolase, cytoplasm, polymorphism, metal-binding, cleavage on pair of basic residues
  
• 2wc0.pdb. hydrolase/hormone 06-mar-09 2wc0 Zn
  Title: crystal structure of human insulin degrading enzyme in complex with iodinated insulin
  Author: m. manolopoulou, q. guo, e. malito, a. b. schilling, w. j. tang
  Keywords: metal-binding, cleavage on pair of basic residues
  
• 2wc9.pdb. viral protein 10-mar-09 2wc9 Mn Se
  Title: crystal structure of the g2p (large terminase) nuclease domain from the bacteriophage spp1 with bound mn
  Author: c. smits, m. chechik, o. v. kovalevskiy, m. b. shevtsov, a. w. foster, j. c. alonso, a. a. antson
  Keywords: large terminase, nuclease, dna translocation
  
• 2wcq.pdb. immune system 13-mar-09 2wcq
  Title: crystal structure of tip-alpha n34 (hp0596) from helicobacter pylori at ph4
  Author: t. tosi, g. cioci, k. jouravleva, c. dian, l. terradot
  Keywords: tip-alpha, helicobacter pylori, immune system
  
• 2wcr.pdb. immune system 13-mar-09 2wcr Ni
  Title: crystal structure of tip-alpha n34 (hp0596) from helicobacter pylori at ph8
  Author: t. tosi, g. cioci, k. jouravleva, c. dian, l. terradot
  Keywords: tip-alpha, helicobacter pylori, immune system
  
• 2wct.pdb. rna-binding protein 16-mar-09 2wct
  Title: human sars coronavirus unique domain (triclinic form)
  Author: j. tan, c. vonrhein, o. s. smart, g. bricogne, m. bollati, g. hansen, j. r. mesters, r. hilgenfeld
  Keywords: rna-binding, zinc-finger, metal-binding, transmembrane, ribosomal frameshifting, thiol protease, disulfide bond, zinc, protease, membrane, hydrolase, cytoplasm
  
• 2wgl.pdb. metal binding protein 21-apr-09 2wgl Se
  Title: crystal structure of helicobactor pylori uref
  Author: y. h. fong, y. w. chen, k. b. wong
  Keywords: virulence, chaperone, nickel insertion, metal binding protein
  
• 2whj.pdb. hydrolase 05-may-09 2whj Na
  Title: understanding how diverse mannanases recognise heterogeneous substrates
  Author: l. e. tailford, v. m. a. ducros, j. e. flint, s. m. roberts, c. morland, d. l. zechel, n. smith, m. e. bjornvad, t. v. borchert, k. s. wilson, g. j. davies, h. j. gilbert
  Keywords: glycoside hydrolase, hydrolase
  
• 2whk.pdb. hydrolase 05-may-09 2whk Zn Ca
  Title: structure of bacillus subtilis mannanase man26
  Author: v. m. a. ducros, g. j. davies
  Keywords: clan gh-a, hydrolase, mannanase, carbohydrate metabolism, polysaccharide degradation, glycosidase, glycoside hydrolase
  
• 2whl.pdb. hydrolase 05-may-09 2whl
  Title: understanding how diverse mannanases recognise heterogeneous substrates
  Author: l. e. tailford, v. m. a. ducros, j. e. flint, s. m. roberts, c. morland, d. l. zechel, n. smith, m. e. bjornvad, t. v. borchert, k. s. wilson, g. j. davies, h. j. gilbert
  Keywords: glycoside hydrolase, hydrolase
  
• 2whm.pdb. hydrolase 05-may-09 2whm Zn Na
  Title: cellvibrio japonicus man26a e121a and e320g double mutant in complex with mannobiose
  Author: v. m. a. ducros, g. j. davies, j. e. flint, h. j. gilbert
  Keywords: man26, gh-a clan, hydrolase, mannanase, glycosidase
  
• 2whr.pdb. hydrolase 06-may-09 2whr Br
  Title: crystal structure of acetylcholinesterase in complex with k027
  Author: f. ekstrom, a. hornberg, e. artursson, l. -g. hammarstrom, g. schneider, y. -p. pang
  Keywords: cell junction
  
• 2wit.pdb. membrane protein 17-may-09 2wit Se
  Title: crystal structure of the sodium-coupled glycine betaine symporter betp from corynebacterium glutamicum with bound substrate
  Author: s. ressl, a. c. terwisscha van scheltinga, c. vonrhein, v. ott, c. ziegler
  Keywords: chemosensor and osmosensor, trimer, membrane, transport, cell membrane, secondary transporter, sodium coupled transport, transmembrane, betaine transport, hyperosmotic stress
  
• 2wiw.pdb. hydrolase/dna 18-may-09 2wiw
  Title: crystal structures of holliday junction resolvases from archaeoglobus fulgidus bound to dna substrate
  Author: c. carolis, c. koehler, c. sauter, j. basquin, d. suck, i. toeroe
  Keywords: type ii restriction endonuclease, holliday junction resolvase, hydrolase, dna binding protein
  
• 2wiz.pdb. hydrolase/dna 18-may-09 2wiz
  Title: crystal structures of holliday junction resolvases from archaeoglobus fulgidus bound to dna substrate
  Author: c. carolis, c. koehler, c. sauter, j. basquin, d. suck, i. toeroe
  Keywords: type ii restriction endonuclease, holliday junction resolvase, hydrolase, dna binding protein
  
• 2wj0.pdb. hydrolase/dna 18-may-09 2wj0 Co
  Title: crystal structures of holliday junction resolvases from archaeoglobus fulgidus bound to dna substrate
  Author: c. carolis, c. koehler, c. sauter, j. basquin, d. suck, i. toeroe
  Keywords: type ii restriction endonuclease, holliday junction resolvase, hydrolase, dna binding protein
  
• 2z3u.pdb. oxidoreductase 06-jun-07 2z3u Fe
  Title: crystal structure of chromopyrrolic acid bound cytochrome p450 stap (cyp245a1)
  Author: m. makino, h. sugimoto, y. shiro, s. asamizu, h. onaka, s. nagano
  Keywords: monoxygenase, oxydoreductase, heme-enzyme, chromopyrrolic acid, oxidoreductase
  
• 2zjw.pdb. transferase 11-mar-08 2zjw
  Title: crystal structure of human ck2 alpha complexed with ellagic acid
  Author: y. sekiguchi, t. kinoshita, t. nakaniwa, t. tada
  Keywords: atp-binding, kinase, nucleotide- binding, serine/threonine-protein kinase, transferase, wnt signaling pathway
  
• 2zom.pdb. unknown function 23-may-08 2zom
  Title: crystal structure of cuta1 from oryza sativa
  Author: y. kezuka, b. bagautdinov, s. katoh, y. ohtake, k. yutani, t. nonaka, e. katoh
  Keywords: protein stability, unknown function
  
• 2zxu.pdb. transferase/rna 07-jan-09 2zxu Mg
  Title: crystal structure of trna modification enzyme miaa in the complex with trna(phe) and dmaspp
  Author: j. sakai, m. yao, s. chimnaronk, i. tanaka
  Keywords: atp-binding, trna modification enzyme, nucleotide-binding, nucleotidyltransferase, transferase, trna processing, transferase/rna complex
  
• 3a1l.pdb. oxidoreductase 09-apr-09 3a1l Cl Fe
  Title: crystal structure of 11,11'-dichlorochromopyrrolic acid bound cytochrome p450 stap (cyp245a1)
  Author: m. makino, h. sugimoto, y. shiro, s. asamizu, h. onaka, s. nagano
  Keywords: cytochrome p450, monooxygenase, heme-enzyme, heme, iron, metal-binding
  
• 3b6b.pdb. transferase 28-oct-07 3b6b Mg
  Title: crystal structure of acanthamoeba polyphaga mimivirus nucleoside diphosphate kinase complexed with dgdp
  Author: s. jeudy, a. lartigue, j. m. claverie, c. abergel
  Keywords: phosphotransferase, nucleotide binding protein, atp- binding, kinase, magnesium, metal-binding, nucleotide metabolism, nucleotide-binding, phosphorylation
  
• 3bkr.pdb. lipid binding protein 07-dec-07 3bkr
  Title: crystal structure of sterol carrier protein-2 like-3 (scp2- l3) from aedes aegypti
  Author: d. h. dyer, q. lan, k. t. forest
  Keywords: mosquito, fatty acid, palmitic acid, cholesterol, lipid binding protein
  
• 3bks.pdb. lipid binding protein 07-dec-07 3bks
  Title: crystal structure of sterol carrier protein-2 like-3 (scp2- l3) from aedes aegypti
  Author: d. h. dyer, q. lan, k. t. forest
  Keywords: mosquito, fatty acid, palmitic acid, cholesterol, lipid binding protein
  
• 3bts.pdb. transcription 30-dec-07 3bts
  Title: crystal structure of a ternary complex of the transcriptional repressor gal80p (gal80s0 [g301r]) and the acidic activation domain of gal4p (aa 854-874) from saccharomyces cerevisiae with nad
  Author: p. r. kumar, l. joshua-tor
  Keywords: nad, rossmann fold, acetylation, carbohydrate metabolism, dna-binding, galactose metabolism, repressor, transcription regulation, activator, metal-binding, nucleus, phosphoprotein, zinc
  
• 3btu.pdb. transcription 30-dec-07 3btu
  Title: crystal structure of the super-repressor mutant of gal80p from saccharomyces cerevisiae; gal80(s2) [e351k]
  Author: p. r. kumar, l. joshua-tor
  Keywords: acetylation, carbohydrate metabolism, dna-binding, galactose metabolism, repressor, transcription regulation
  
• 3btv.pdb. transcription 31-dec-07 3btv
  Title: crystal structure of the super-repressor mutant of gal80p from saccharomyces cerevisiae; gal80(s0)-[g301r]
  Author: p. r. kumar, l. joshua-tor
  Keywords: acetylation, carbohydrate metabolism, dna-binding, galactose metabolism, transcription regulation
  
• 3cll.pdb. transport protein 19-mar-08 3cll
  Title: crystal structure of the spinach aquaporin sopip2;1 s115e mutant
  Author: m. nyblom, a. alfredsson, k. hallgren, k. hedfalk, r. neutze, s. trnroth-horsefield
  Keywords: aquaporin, transmembrane, transport, transport protein
  
• 3cn5.pdb. transport protein 25-mar-08 3cn5
  Title: crystal structure of the spinach aquaporin sopip2;1 s115e, s274e mutant
  Author: m. nyblom, a. alfredsson, k. hallgren, k. hedfalk, r. neutze, s. tornroth-horsefield
  Keywords: aquaporin, transmembrane, transport, transport protein
  
• 3cn6.pdb. transport protein 25-mar-08 3cn6 Cd
  Title: crystal structure of the spinach aquaporin sopip2;1 s274e mutant
  Author: m. nyblom, a. alfredsson, k. hallgren, k. hedfalk, r. neutze, s. tornroth-horsefield
  Keywords: aquaporin, transmembrane, transport, transport protein
  
• 3d1b.pdb. nuclear protein 05-may-08 3d1b
  Title: tetragonal crystal structure of tas3 c-terminal alpha motif
  Author: h. li, d. j. patel
  Keywords: rits complex, immunoglobulin fold, cell cycle, chromosome partition, nucleus, rna-mediated gene silencing, nuclear protein
  
• 3d1n.pdb. transcription regulator/dna 06-may-08 3d1n Se
  Title: structure of human brn-5 transcription factor in complex with corticotrophin-releasing hormone gene promoter
  Author: j. h. pereira, s. c. ha, s. -h. kim
  Keywords: helix-turn-helix (hth), dna-binding, homeobox, nucleus, transcription, transcription regulation, transcription regulator/dna complex
  
• 3d4a.pdb. hydrolase 14-may-08 3d4a
  Title: crystal structure of ribonuclease sa2 with 3'-gmp obtained by ligand diffusion
  Author: v. hlinkova, j. sevcik
  Keywords: mononucleotide, protein-mononucleotide complex, hydrolase
  
• 3d5g.pdb. hydrolase 16-may-08 3d5g
  Title: structure of ribonuclease sa2 complexes with mononucleotides: new aspects of catalytic reaction and substrate recognition
  Author: v. hlinkova, r. dvorsky, f. povazanec, j. sevcik
  Keywords: hydrolase
  
• 3d5i.pdb. hydrolase 16-may-08 3d5i
  Title: crystal structure of ribonuclease sa2 with exo-2',3'- cyclophosphorotioate
  Author: v. hlinkova, j. sevcik
  Keywords: mononucleotide, protein-mononucleotide complex, exo-2',3'-cyclophosphorotioate, hydrolase
  
• 3d73.pdb. pheromone binding protein 20-may-08 3d73
  Title: crystal structure of a pheromone binding protein mutant d35a, from apis mellifera, at ph 7.0
  Author: m. e. pesenti, s. spinelli, v. bezirard, l. briand, j. c. pernollet, m. tegoni, c. cambillau
  Keywords: honey bee, apis mellifera, signal transduction, queen mandibular protein, ph
  
• 3d74.pdb. pheromone binding protein 20-may-08 3d74
  Title: crystal structure of a pheromone binding protein mutant d35a, from apis mellifera, soaked at ph 5.5
  Author: m. e. pesenti, s. spinelli, v. bezirard, l. briand, j. c. pernollet, m. tegoni, c. cambillau
  Keywords: honey bee, apis mellifera, signal transduction, queen mandibular protein, ph
  
• 3d75.pdb. pheromone binding protein 20-may-08 3d75
  Title: crystal structure of a pheromone binding protein mutant d35n, from apis mellifera, at ph 5.5
  Author: m. e. pesenti, s. spinelli, v. bezirard, l. briand, j. c. pernollet, m. tegoni, c. cambillau
  Keywords: honey bee, apis mellifera, signal transduction, queen mandibular protein, ph
  
• 3d76.pdb. pheromone binding protein 20-may-08 3d76 Na
  Title: crystal structure of a pheromone binding protein mutant d35n, from apis mellifera, soaked at ph 7.0
  Author: m. e. pesenti, s. spinelli, v. bezirard, l. briand, j. c. pernollet, m. tegoni, c. cambillau
  Keywords: honey bee, apis mellifera, signal transduction, queen mandibular protein, ph
  
• 3d77.pdb. pheromone binding protein 20-may-08 3d77 Na
  Title: crystal structure of a pheromone binding protein mutant d35n, from apis mellifera, soaked at ph 4.0
  Author: m. e. pesenti, s. spinelli, v. bezirard, l. briand, j. c. pernollet, m. tegoni, c. cambillau
  Keywords: honey bee, apis mellifera, signal transduction, queen mandibular protein, ph
  
• 3d78.pdb. pheromone binding protein 20-may-08 3d78
  Title: dimeric crystal structure of a pheromone binding protein mutant d35n, from apis mellifera, at ph 7.0
  Author: m. e. pesenti, s. spinelli, v. bezirard, l. briand, j. c. pernollet, m. tegoni, c. cambillau
  Keywords: honey bee, apis mellifera, signal transduction, queen mandibular protein, ph
  
• 3d90.pdb. transcription 26-may-08 3d90
  Title: crystal structure of the human progesterone receptor ligand- binding domain bound to levonorgestrel
  Author: i. petit-topin, n. turque, a. ulman, e. gainer, m. e. rafestin-oblin, j. fagart
  Keywords: steroid-binding, transcription, transcription regulation, zinc, zinc-finger
  
• 3dfc.pdb. transferase 11-jun-08 3dfc
  Title: crystal structure of a glycine-rich loop mutant of the death associated protein kinase catalytic domain with amppnp
  Author: l. k. mcnamara, j. p. schavocky, d. m. watterson, j. s. brunzelle
  Keywords: glycine-rich loop mutation, amppnp, ank repeat, apoptosis, atp-binding, calmodulin-binding, cytoplasm, nucleotide-binding, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
  
• 3dgk.pdb. transferase 13-jun-08 3dgk
  Title: crystal structure of a glycine-rich loop mutant of the death associated protein kinase catalytic domain
  Author: l. k. mcnamara, j. p. schavocky, d. m. watterson, j. s. brunzelle
  Keywords: glycine-rich loop mutation, ank repeat, apoptosis, atp-binding, calmodulin-binding, cytoplasm, nucleotide-binding, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
  
• 3dgs.pdb. viral protein 16-jun-08 3dgs
  Title: changing the determinants of protein stability from covalent to non-covalent interactions by in-vitro evolution: a structural and energetic analysis
  Author: r. p. jakob, i. kather, h. dobbek, f. x. schmid
  Keywords: dissulfide bonds, evolutionary protein design, phage gene-3-protein, phage display, capsid protein, phage recognition, virion, viral protein
  
• 3dlp.pdb. ligase 28-jun-08 3dlp Cl
  Title: 4-chlorobenzoyl-coa ligase/synthetase, mutant d402p, bound to 4cb
  Author: r. wu, j. cao, a. s. reger, x. lu, a. m. gulick, d. dunaway-mariano
  
  
• 3dp3.pdb. lyase 07-jul-08 3dp3 Cl Br
  Title: crystal structure of (3r)-hydroxyacyl-acyl carrier protein dehydratase (fabz) from helicobacter pylori in complex with compound 3q
  Author: l. zhang, l. he, x. liu, h. liu, x. shen, h. jiang
  Keywords: lyase
  
• 3dp9.pdb. hydrolase 07-jul-08 3dp9 I
  Title: crystal structure of vibrio cholerae 5'- methylthioadenosine/s-adenosyl homocysteine nucleosidase (mtan) complexed with butylthio-dadme-immucillin a
  Author: m. ho, j. a. gutierrez, t. crowder, a. rinaldo-matthis, s. c. almo, v. l. schramm
  Keywords: butylthio dadme immucillin a, mtan, hydrolase
  
• 3dv7.pdb. lyase 18-jul-08 3dv7 Zn
  Title: role of hydrophilic residues in proton transfer during catalysis by human carbonic anhydrase ii (n62a)
  Author: b. s. avvaru
  Keywords: acetylation, cytoplasm, disease mutation, lyase, metal-binding, polymorphism, zinc
  
• 3dvb.pdb. lyase 18-jul-08 3dvb Zn
  Title: x-ray crystal structure of mutant n62v human carbonic anhydrase ii
  Author: b. s. avvaru
  Keywords: acetylation, cytoplasm, disease mutation, lyase, metal-binding, polymorphism, zinc
  
• 3dvc.pdb. lyase 18-jul-08 3dvc Zn
  Title: x-ray crystal structure of mutant n62t of human carbonic anhydrase ii
  Author: b. s. avvaru
  Keywords: acetylation, cytoplasm, disease mutation, lyase, metal-binding, polymorphism, zinc
  
• 3dvd.pdb. lyase 18-jul-08 3dvd Zn
  Title: x-ray crystal structure of mutant n62d of human carbonic anhydrase ii
  Author: b. s. avvaru
  Keywords: acetylation, cytoplasm, disease mutation, lyase, metal-binding, polymorphism, zinc
  
• 3dvf.pdb. protein fibril 18-jul-08 3dvf
  Title: structure of amyloidogenic kappa 1 bence jones protein
  Author: e. g. randles, j. r. thompson, m. ramirez-alvarado
  Keywords: light chain amyloidosis, amyloid, immunoglobulin, light chain, light chain variable domain, protein fibril
  
• 3dvi.pdb. protein fibril 18-jul-08 3dvi
  Title: crystal structure of kappa 1 amyloidogenic light chain variable domain
  Author: j. r. thompson, e. g. randles, m. ramirez-alvarado
  Keywords: light chain amyloidosis, amyloid, immunoglobulin, light chain, light chain variable domain, protein fibril
  
• 3e1j.pdb. metal binding protein 04-aug-08 3e1j Fe
  Title: crystal structure of e. coli bacterioferritin (bfr) with an unoccupied ferroxidase centre (apo-bfr).
  Author: a. crow, t. lawson, a. lewin, g. r. moore, n. le brun
  Keywords: heme, iron, iron storage, metal-binding, metal binding protein
  
• 3e1l.pdb. metal binding protein 04-aug-08 3e1l Fe
  Title: crystal structure of e. coli bacterioferritin (bfr) soaked in phosphate with an alternative conformation of the unoccupied ferroxidase centre (apo-bfr ii).
  Author: a. crow, t. lawson, a. lewin, g. r. moore, n. le brun
  Keywords: heme, iron, iron storage, metal-binding, metal binding protein
  
• 3e1m.pdb. metal binding protein 04-aug-08 3e1m Fe
  Title: crystal structure of e. coli bacterioferritin (bfr) obtained after soaking apo-bfr crystals for 2.5 minutes in fe2+ (2.5m fe(ii)-bfr)
  Author: a. crow, t. lawson, a. lewin, g. r. moore, n. le brun
  Keywords: heme, iron, iron storage, metal-binding, metal binding protein
  
• 3e1n.pdb. metal binding protein 04-aug-08 3e1n Fe
  Title: crystal structure of e. coli bacterioferritin (bfr) after a 65 minute (aerobic) exposure to fe(ii) revealing a possible mu-oxo bridge/mu-hydroxy bridged diiron intermediate at the ferroxidase centre. (fe(iii)-o-fe(iii)- bfr).
  Author: a. crow, t. lawson, a. lewin, g. r. moore, n. le brun
  Keywords: heme, iron, iron storage, metal-binding, metal binding protein
  
• 3e1o.pdb. metal binding protein 04-aug-08 3e1o Zn Fe
  Title: crystal structure of e. coli bacterioferritin (bfr) with two zn(ii) ion sites at the ferroxidase centre (zn-bfr).
  Author: a. crow, t. lawson, a. lewin, g. r. moore, n. le brun
  Keywords: heme, iron, iron storage, metal-binding, metal binding protein
  
• 3e1p.pdb. metal binding protein 04-aug-08 3e1p Zn Fe
  Title: crystal structure of e. coli bacterioferritin (bfr) in which the ferroxidase centre is inhibited with zn(ii) and high occupancy iron is bound within the cavity.
  Author: a. crow, t. lawson, a. lewin, g. r. moore, n. le brun
  Keywords: heme, iron, iron storage, metal-binding, metal binding protein
  
• 3e2z.pdb. transferase, lyase 06-aug-08 3e2z
  Title: crystal structure of mouse kynurenine aminotransferase iii in complex with kynurenine
  Author: q. han, r. robinson, t. cai, d. a. tagle, j. li
  Keywords: plp dependent protein, alternative splicing, aminotransferase, lyase, pyridoxal phosphate, transferase
  
• 3e78.pdb. tpp binding protein 18-aug-08 3e78 Cl Ca
  Title: structure determination of the cancer-associated mycoplasma hyorhinis protein mh-p37
  Author: k. h. sippel, a. h. robbins, r. reutzel, j. domsic, r. mckenna
  Keywords: p37, tpp, cell membrane, lipoprotein, membrane, palmitate, transport, tpp binding protein
  
• 3e79.pdb. tpp binding protein 18-aug-08 3e79 Cl I Ca
  Title: structure determination of the cancer-associated mycoplasma hyorhinis protein mh-p37
  Author: k. h. sippel, a. h. robbins, r. reutzel, j. domsic, r. mckenna
  Keywords: p37, tpp, cell membrane, lipoprotein, membrane, palmitate, transport, tpp binding protein
  
• 3e7f.pdb. hydrolase 18-aug-08 3e7f Zn
  Title: crystal structure of 6-phosphogluconolactonase from trypanosoma brucei complexed with 6-phosphogluconic acid
  Author: l. poggi, m. delarue, n. duclert-savatier, v. stoven
  Keywords: pentose phosphate pathway, 6- phosphogluconolactonase, trypanosoma brucei, hydrolase, zinc binding site
  
• 3e7s.pdb. oxidoreductase 18-aug-08 3e7s Zn Fe As
  Title: structure of bovine enos oxygenase domain with inhibitor ar- c95791
  Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stuehr, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
  Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase calmodulin-binding, fad, fmn, iron, metal- binding, nadp, oxidoreductase, polymorphism, zinc
  
• 3e90.pdb. hydrolase 21-aug-08 3e90
  Title: west nile vi rus ns2b-ns3protease in complexed with inhibitor naph-kkr-h
  Author: j. l. martin, g. robin
  Keywords: rna replication, transmembrane, virion
  
• 3eb9.pdb. hydrolase 27-aug-08 3eb9 Zn
  Title: crystal structure of 6-phosphogluconolactonase from trypanosoma brucei complexed with citrate
  Author: l. poggi, m. delarue, n. duclert-savatier, v. stoven
  Keywords: pentose phosphate pathway, 6- phosphogluconolactonase, trypanosoma brucei, hydrolase, zinc binding site
  
• 3ec2.pdb. replication 28-aug-08 3ec2 Mg Se
  Title: crystal structure of the dnac helicase loader
  Author: m. l. mott, j. p. erzberger, m. m. coons, j. m. berger
  Keywords: replication initiation factor, atp-binding, nucleotide-binding
  
• 3ec3.pdb. isomerase 28-aug-08 3ec3 Se
  Title: crystal structure of the bb fragment of erp72
  Author: g. kozlov, k. gehring
  Keywords: calcium, endoplasmic reticulum, glycoprotein, isomerase, redox-active center
  
• 3eco.pdb. transcription 01-sep-08 3eco
  Title: crystal structure of mepr, a transcription regulator of the staphylococcus aureus multidrug efflux pump mepa
  Author: r. g. brennan, m. kumaraswami
  Keywords: dna-binding, transcription, transcription regulation
  
• 3ee6.pdb. hydrolase 04-sep-08 3ee6 Cl Zn Ca
  Title: crystal structure analysis of tripeptidyl peptidase -i
  Author: a. pal, r. kraetzner, m. grapp, t. gruene, k. schreiber, m. granborg, h. urlaub, a. r. asif, s. becker, j. gartner, g. m. sheldrick, r. steinfeld
  Keywords: alternative splicing, disease mutation, epilepsy, glycoprotein, hydrolase, lysosome, neuronal ceroid lipofuscinosis, polymorphism, protease, serine protease, zymogen
  
• 3efc.pdb. membrane protein 08-sep-08 3efc
  Title: crystal structure of yaet periplasmic domain
  Author: p. z. gatzeva-topalova, t. a. walton, m. c. sousa
  Keywords: cell membrane, cell outer membrane, membrane, membrane protein
  
• 3efo.pdb. protein transport 09-sep-08 3efo Zn
  Title: crystal structure of the mammalian copii-coat protein sec23/24 bound to the transport signal sequence of syntaxin 5
  Author: j. goldberg, j. d. mancias
  Keywords: coat protein, transport signal, disease mutation, endoplasmic reticulum, er-golgi transport, golgi apparatus, membrane, polymorphism, protein transport, transport
  
• 3eg7.pdb. transferase 10-sep-08 3eg7 Mg Se
  Title: spermidine n1-acetyltransferase from vibrio cholerae
  Author: j. osipiuk, l. volkart, s. moy, w. f. anderson, a. joachimiak, center for structural genomics of infectious diseases (csgid)
  Keywords: spermidine n1-acetyltransferase, idp01616, transferase, center for structural genomics of infectious diseases, csgid
  
• 3eg9.pdb. protein transport 10-sep-08 3eg9 Zn
  Title: crystal structure of the mammalian copii-coat protein sec23/24 bound to the transport signal sequence of membrin
  Author: j. goldberg, j. d. mancias
  Keywords: vesicle transport, transport signal sequence, disease mutation, endoplasmic reticulum, er-golgi transport, golgi apparatus, membrane, polymorphism, protein transport, transport
  
• 3egd.pdb. protein transport 10-sep-08 3egd Zn
  Title: crystal structure of the mammalian copii-coat protein sec23a/24a complexed with the snare protein sec22 and bound to the transport signal sequence of vesicular stomatitis virus glycoprotein
  Author: j. goldberg, j. d. mancias
  Keywords: coiled coil, phosphoprotein, transmembrane
  
• 3egx.pdb. protein transport 11-sep-08 3egx Zn
  Title: crystal structure of the mammalian copii-coat protein sec23a/24a complexed with the snare protein sec22b and bound to the transport signal sequence of the snare protein bet1
  Author: j. goldberg, j. d. mancias
  Keywords: cytoplasm, coiled coil, phosphoprotein, transmembrane
  
• 3eh1.pdb. protein transport 11-sep-08 3eh1 Zn
  Title: crystal structure of the human copii-coat protein sec24b
  Author: j. goldberg, j. d. mancias
  Keywords: vesicle transport, transport signal sequence, cytoplasm, endoplasmic reticulum, er-golgi transport, golgi apparatus, membrane, phosphoprotein, protein transport, transport
  
• 3eh2.pdb. protein transport 11-sep-08 3eh2 Zn
  Title: crystal structure of the human copii-coat protein sec24c
  Author: j. goldberg, j. d. mancias
  Keywords: vesicle transport, cytoplasm, endoplasmic reticulum, er-golgi transport, golgi apparatus, membrane, phosphoprotein, protein transport, transport
  
• 3eig.pdb. oxidoreductase 15-sep-08 3eig Cd
  Title: crystal structure of a methotrexate-resistant mutant of human dihydrofolate reductase
  Author: b. j. yachnin, a. m. berghuis
  Keywords: mutant human dihydrofolale reductase, nadp, one-carbon metabolism
  
• 3eiw.pdb. transport protein 17-sep-08 3eiw Cl
  Title: crystal structure of staphylococcus aureus lipoprotein, htsa
  Author: j. c. grigg, m. e. p. murphy
  Keywords: lipoprotein, heme, haem, transport protein
  
• 3eix.pdb. transport protein 17-sep-08 3eix Cl Se
  Title: crystal structure of selenomethionine labelled staphylococcus aureus lipoprotein, htsa
  Author: j. c. grigg, m. e. p. murphy
  Keywords: lipoprotein, heme, haem, transport protein
  
• 3ejf.pdb. hydrolase 18-sep-08 3ejf
  Title: crystal structure of ibv x-domain at ph 8.5
  Author: y. piotrowski, g. hansen, r. hilgenfeld
  Keywords: coronavirus, x-domain, macro domain, nsp3, adrp, hydrolase, ribosomal frameshifting, rna-binding
  
• 3ejg.pdb. hydrolase 18-sep-08 3ejg
  Title: crystal structure of hcov-229e x-domain
  Author: y. piotrowski, g. hansen, r. hilgenfeld
  Keywords: human coronavirus, x-domain, macro domain, nsp3, adrp, hydrolase, ribosomal frameshifting, rna-binding
  
• 3ejx.pdb. isomerase 18-sep-08 3ejx
  Title: crystal structure of diaminopimelate epimerase from arabidopsis thaliana in complex with ll-azidap
  Author: b. pillai, v. a. moorthie, m. m. cherney, j. c. vederas, m. n. g. james
  Keywords: arabidopsis, plp-independenet amino acid racemase, aziridino-diaminopimelate, crystal structure, isomerase
  
• 3ekc.pdb. immune system 19-sep-08 3ekc
  Title: structure of w60v beta-2 microglobulin mutant
  Author: s. ricagno, e. sangiovanni, v. bellotti, m. bolognesi
  Keywords: tryptophan, glycine, amyloidosis, dra, beta fibrils, disease mutation, glycation, glycoprotein, immune response, immunoglobulin domain, mhc i, pyrrolidone carboxylic acid, secreted, immune system
  
• 3eke.pdb. hydrolase 19-sep-08 3eke
  Title: crystal structure of ibv x-domain at ph 5.6
  Author: y. piotrowski, g. hansen, r. hilgenfeld
  Keywords: coronavirus, x-domain, macro domain, nsp3, adrp, hydrolase, ribosomal frameshifting, rna-binding
  
• 3ekm.pdb. isomerase 19-sep-08 3ekm
  Title: crystal structure of diaminopimelate epimerase form arabidopsis thaliana in complex with irreversible inhibitor dl-azidap
  Author: b. pillai, v. a. moorthie, m. m. cherney, m. j. van belkum, j. c. vederas, m. n. g. james
  Keywords: arabidopsis, plp-independent amino acid racemase, aziridino-diaminopimelate, crystal structure, catalytic mechanism, isomerase
  
• 3eqs.pdb. ligase 01-oct-08 3eqs
  Title: crystal structure of human mdm2 in complex with a 12-mer peptide inhibitor
  Author: m. pazgier, w. lu
  Keywords: ubl conjugation pathway, zinc, zinc-finger
  
• 3eqy.pdb. oncoprotein 01-oct-08 3eqy
  Title: crystal structure of human mdmx in complex with a 12-mer peptide inhibitor
  Author: m. pazgier, w. lu
  Keywords: mdmx,mdmx-peptide inhibitor complex, oncoprotein, metal-binding, nucleus, polymorphism, zinc, zinc-finger
  
• 3eta.pdb. signaling protein, transferase 07-oct-08 3eta
  Title: kinase domain of insulin receptor complexed with a pyrrolo pyridine inhibitor
  Author: s. patnaik, k. stevens, r. gerding, f. deanda, b. shotwell, j. tang, t. hamajima, h. nakamura, a. leesnitzer, a. hassell, l. shewchuk, r. kumar, h. lei, s. chamberlain
  Keywords: receptor, transferase, transmembrane, tyrosine-protein kinase, signaling protein
  
• 3ey1.pdb. hydrolase/dna 17-oct-08 3ey1
  Title: a conformational transition in the structure of a 2'- thiomethyl-modified dna visualized at high resolution
  Author: m. egli, p. s. pallan
  Keywords: protein-dna complex, x-ray crystallography, endonuclease, 2'-thiomethyl uridine ribonucleic acid, cytoplasm, hydrolase, magnesium, manganese, metal-binding, nuclease, hydrolase/dna complex
  
• 3ey2.pdb. dna 17-oct-08 3ey2
  Title: a conformational transition in the structure of a 2'- thiomethyl-modified dna visualized at high resolution
  Author: m. egli, p. s. pallan
  Keywords: modified sugar, nucleic acid structure.
  
• 3ey3.pdb. dna 17-oct-08 3ey3 Sr
  Title: a conformational transition in the structure of a 2'- thiomethyl-modified dna visualized at high resolution
  Author: m. egli, p. s. pallan
  Keywords: crystal structure, 2'-thiomethyl uridine, modified sugar
  
• 3f02.pdb. hydrolase inhibitor 24-oct-08 3f02
  Title: cleaved human neuroserpin
  Author: s. ricagno, g. sorrentino, s. caccia, m. bolognesi
  Keywords: serpin, cleaved form, fenib, human, disease mutation, glycoprotein, protease inhibitor, secreted, serine protease inhibitor, hydrolase inhibitor
  
• 3f5n.pdb. hydrolase inhibitor 04-nov-08 3f5n
  Title: structure of native human neuroserpin
  Author: s. ricagno, s. caccia, g. sorrentino, m. bolognesi
  Keywords: serpin, cleaved form, fenib, human, tissue plasminogen activator, hydrolase inhibitor
  
• 3f5v.pdb. hydrolase 04-nov-08 3f5v Ca
  Title: c2 crystal form of mite allergen der p 1
  Author: e. a. stura, w. minor, m. chruszcz, j. m. saint remy
  Keywords: asthma, dust mites, allergen, glycoprotein, hydrolase, polymorphism, protease, secreted, thiol protease
  
• 3f8k.pdb. transferase 12-nov-08 3f8k Se
  Title: crystal structure of protein acetyltransferase (pat) from sulfolobus solfataricus
  Author: m. m. brent
  
  
• 3faw.pdb. hydrolase 18-nov-08 3faw Cl Ca
  Title: crystal structure of the group b streptococcus pullulanase sap
  Author: l. j. gourlay
  Keywords: beta barrel, hydrolase, cell wall, peptidoglycan-anchor, secreted
  
• 3fax.pdb. hydrolase 18-nov-08 3fax Cl Ca
  Title: the crystal structure of gbs pullulanase sap in complex with maltotetraose
  Author: l. j. gourlay
  Keywords: alpha amylase domain, pullulanase domain, hydrolase, cell wall, peptidoglycan-anchor, secreted
  
• 3fgc.pdb. oxidoreductase 05-dec-08 3fgc
  Title: crystal structure of the bacterial luciferase:flavin complex reveals the basis of intersubunit communication
  Author: z. t. campbell, a. weichsel, w. r. montfort, t. o. baldwin
  Keywords: flavoprotein, fmn, luminescence, monooxygenase, oxidoreductase, photoprotein
  
• 3fki.pdb. transcription 16-dec-08 3fki Mg Zn
  Title: 12-subunit rna polymerase ii refined with zn-sad data
  Author: p. a. meyer, p. ye, m. h. suh, m. zhang, j. fu
  Keywords: ubl conjugation, zinc-finger, polymorphism, cytoplasm, dna damage, dna repair, mrna processing
  
• 3foe.pdb. isomerase/dna 30-dec-08 3foe Cl F
  Title: structural insight into the quinolone-dna cleavage complex of type iia topoisomerases
  Author: i. laponogov, m. k. sohi, d. a. veselkov, x. -s. pan, r. sawhney, a. w. thompson, k. e. mcauley, l. m. fisher, m. r. sanderson
  Keywords: topoisomerase, dna, protein-dna cleavage complex, streptococcus pneumoniae, clinafloxacin, cell membrane, dna- binding, isomerase, membrane, atp-binding, nucleotide- binding, isomerase/dna complex
  
• 3fof.pdb. isomerase/dna 30-dec-08 3fof F
  Title: structural insight into the quinolone-dna cleavage complex of type iia topoisomerases
  Author: i. laponogov, m. k. sohi, d. a. veselkov, x. -s. pan, r. sawhney, a. w. thompson, k. e. mcauley, l. m. fisher, m. r. sanderson
  Keywords: topoisomerase, dna, protein-dna cleavage complex, streptococcus pneumoniae, moxifloxacin, cell membrane, dna- binding, isomerase, membrane, atp-binding, nucleotide- binding, isomerase/dna complex
  
• 3fr7.pdb. oxidoreductase 08-jan-09 3fr7 Mg
  Title: ketol-acid reductoisomerase (kari) in complex with mg2+
  Author: l. w. guddat, e. w. w. leung
  Keywords: nadph, knotted protein, branched-chain amino acid biosynthesis, isomerase, oxidoreductase
  
• 3fr8.pdb. oxidoreductase 08-jan-09 3fr8 Mg
  Title: rice ketolacid reductoisomerase in complex with mg2+-nadph
  Author: e. w. w. leung, l. w. guddat
  Keywords: branched-chain amino acid biosynthesis, knotted protein, nadph, isomerase, oxidoreductase
  
• 3ftj.pdb. hydrolase 13-jan-09 3ftj
  Title: crystal structure of the periplasmic region of macb from actinobacillus actinomycetemcomitans
  Author: y. xu, n. c. ha
  Keywords: transmembrane, transport
  
• 3fwk.pdb. transferase 18-jan-09 3fwk Cl
  Title: crystal structure of candida glabrata fmn adenylyltransferase
  Author: c. huerta, d. borek, h. zhang
  Keywords: fad biosynthesis, alpha/beta protein, rossmann- like fold, apo-form, extended loop region
  
• 3fxb.pdb. transport protein 20-jan-09 3fxb
  Title: crystal structure of the ectoine-binding protein ueha
  Author: j. lecher, m. pittelkow, j. bursy, s. h. j. smits, l. schmitt, e. bremer
  Keywords: selectivity helix, transport, membrane, transport protein
  
• 3fz2.pdb. viral protein 23-jan-09 3fz2 Se
  Title: crystal structure of the tail terminator protein from phage lambda (gpu-d74a)
  Author: l. g. pell, a. liu, e. edmonds, l. w. donaldson, p. l. howell, a. r. davidson
  Keywords: viral protein
  
• 3fzb.pdb. viral protein 24-jan-09 3fzb
  Title: crystal structure of the tail terminator protein from phage lambda (gpu-wt)
  Author: l. g. pell, a. liu, e. edmonds, l. w. donaldson, p. l. howell, a. r. davidson
  Keywords: viral protein
  
• 3g0w.pdb. hormone 29-jan-09 3g0w Cl F
  Title: crystal structure of the rat androgen receptor ligand binding domain complex with an n-aryl-oxazolidin 2-imine inhibitor
  Author: j. s. sack
  Keywords: transcription, ubl conjugation, zinc, zinc-finger, hormone/growth factor complex
  
• 3g3n.pdb. hydrolase 02-feb-09 3g3n Mg F Zn
  Title: pde7a catalytic domain in complex with 3-(2,6- difluorophenyl)-2-(methylthio)quinazolin-4(3h)-one
  Author: t. castano, h. wang
  Keywords: crystal, inhibitor complex, alternative splicing, camp, hydrolase, phosphoprotein
  
• 3g48.pdb. protein transport 03-feb-09 3g48
  Title: crystal structure of chaperone csaa form bacillus anthracis str. ames
  Author: b. nocek, m. zhou, j. stam, w. anderson, a. joachimiak, center for structural genomics of infectious diseases, center for structural genomics of infectious diseases (csgid)
  Keywords: csaa, structural genomics, niaid structural genomic centers for infectious diseases, center for structural genomics of infectious diseases, protein transport, csgid
  
• 3g4s.pdb. ribosome 04-feb-09 3g4s Cl Sr Mg K Na Cd
  Title: co-crystal structure of tiamulin bound to the large ribosomal subunit
  Author: g. gurel, g. blaha, p. b. moore, t. a. steitz
  Keywords: tiamulin, haloarcula marismortui, ribonucleoprotein, ribosomal protein, rna-binding, rrna- binding, trna-binding, metal-binding, zinc, zinc-finger, acetylation, ribosome
  
• 3g59.pdb. transferase 04-feb-09 3g59
  Title: crystal structure of candida glabrata fmn adenylyltransferase in complex with atp
  Author: c. huerta, h. zhang
  Keywords: alpha/beta protein, rossmann-like fold, atp binding, extended loop region, transferase
  
• 3g5a.pdb. transferase 04-feb-09 3g5a Mg
  Title: crystal structure of candida glabrata fmn adenylyltransferase in complex with fmn and atp analog ampcpp
  Author: c. huerta, h. zhang
  Keywords: atp binding, fad biosynthesis, alpha/beta protein, rossmann-like fold, extended loop region, transferase
  
• 3g5q.pdb. transferase 05-feb-09 3g5q
  Title: crystal structure of thermus thermophilus trmfo
  Author: h. nishimasu, r. ishitani, h. hori, o. nureki
  Keywords: cytoplasm, fad, flavoprotein, methyltransferase, transferase, trna processing
  
• 3g5r.pdb. transferase 05-feb-09 3g5r Ca
  Title: crystal structure of thermus thermophilus trmfo in complex with tetrahydrofolate
  Author: h. nishimasu, r. ishitani, h. hori, o. nureki
  Keywords: cytoplasm, fad, flavoprotein, methyltransferase, transferase, trna processing
  
• 3g5s.pdb. transferase 05-feb-09 3g5s Mg Se
  Title: crystal structure of thermus thermophilus trmfo in complex with glutathione
  Author: h. nishimasu, r. ishitani, h. hori, o. nureki
  Keywords: cytoplasm, fad, flavoprotein, methyltransferase, transferase, trna processing
  
• 3g65.pdb. cell cycle 06-feb-09 3g65
  Title: crystal structure of the human rad9-rad1-hus1 dna damage checkpoint complex
  Author: a. s. dore, m. l. kilkenny, n. j. rzechorzek, l. h. pearl
  Keywords: dna binding clamp, dna damage, dna repair, exonuclease, hydrolase, nuclease, nucleus, phosphoprotein, polymorphism, alternative splicing, cytoplasm, cell cycle
  
• 3g6a.pdb. immune system 06-feb-09 3g6a
  Title: crystal structure of anti-il-13 antibody cnto607
  Author: a. teplyakov, g. obmolova, g. l. gilliland
  Keywords: antibody, fab, monoclonal antibody, immune system
  
• 3g6d.pdb. immune system 06-feb-09 3g6d
  Title: crystal structure of the complex between cnto607 fab and il- 13
  Author: a. teplyakov, g. obmolova, g. l. gilliland
  Keywords: antibody, complex, epitope, cytokine, glycoprotein, polymorphism, secreted, monoclonal antibody, immune system
  
• 3g6e.pdb. ribosome 06-feb-09 3g6e Cl Sr Mg K Na Cd
  Title: co-crystal structure of homoharringtonine bound to the large ribosomal subunit
  Author: g. gurel, g. blaha, p. b. moore, t. a. steitz
  Keywords: ribosome
  
• 3g6k.pdb. transferase 06-feb-09 3g6k Mg
  Title: crystal structure of candida glabrata fmn adenylyltransferase in complex with fad and inorganic pyrophosphate
  Author: c. huerta, m. machius, h. zhang
  Keywords: fad biosynthesis, alpha/beta protein, rossmann- like fold, extended loop region, transferase
  
• 3g71.pdb. ribosome 09-feb-09 3g71 Cl Sr Mg K Na Cd
  Title: co-crystal structure of bruceantin bound to the large ribosomal subunit
  Author: g. gurel, g. blaha, p. b. moore, t. a. steitz
  Keywords: haloarcula marismortui, bruceantin, ribonucleoprotein, ribosomal protein, rna-binding, rrna- binding, trna-binding, metal-binding, zinc, zinc-finger, acetylation, ribosome
  
• 3g8q.pdb. rna binding protein 12-feb-09 3g8q Zn Na
  Title: a cytidine deaminase edits c-to-u in transfer rnas in archaea
  Author: y. xiong, b. j. stanley
  Keywords: thump, ferredoxin-like domain, rna binding protein
  
• 3gbd.pdb. isomerase 19-feb-09 3gbd
  Title: crystal structure of the isomaltulose synthase smua from protaminobacter rubrum
  Author: s. ravaud, x. robert, r. haser, n. aghajari
  Keywords: glycoside hydrolase, protaminobacter rubrum
  
• 3gbe.pdb. isomerase 19-feb-09 3gbe
  Title: crystal structure of the isomaltulose synthase smua from protaminobacter rubrum in complex with the inhibitor deoxynojirimycin
  Author: s. ravaud, x. robert, r. haser, n. aghajari
  Keywords: glycoside hydrolase, protaminobacter rubrum, deoxynojirimycin complex
  
• 3gc2.pdb. lyase 21-feb-09 3gc2 Cl Na Se
  Title: 1.85 angstrom crystal structure of o-succinylbenzoate synthase from salmonella typhimurium in complex with succinic acid
  Author: g. minasov, z. wawrzak, t. skarina, o. onopriyenko, p. scott, a. savchenko, w. f. anderson, center for structural genomics of infectious diseases (csgid), center for structural genomics of infectious diseases (csgid)
  Keywords: succinic acid, idp00994, lyase, magnesium, menaquinone biosynthesis, metal-binding, structural genomics, center for structural genomics of infectious diseases, csgid
  
• 3gcd.pdb. toxin 21-feb-09 3gcd Na Cd
  Title: structure of the v. cholerae rtx cysteine protease domain in complex with an aza-leucine peptide inhibitor
  Author: p. j. lupardus, k. c. garcia, a. shen, m. bogyo
  Keywords: repeats-in-toxin, martx, cysteine protease, inositol hexakisphosphate, aza-peptide, aza-leu
  
• 3gg8.pdb. transferase 27-feb-09 3gg8
  Title: crystal structure of the toxoplasma gondii pyruvate kinase n terminal truncated
  Author: a. k. wernimont, j. lew, a. allali-hassani, m. vedadi, a. bochkarev, c. h. arrowsmith, c. bountra, j. weigelt, a. m. edwards, t. hills, m. schapira, r. hui, j. c. pizarro, structural genomics consortium (sgc)
  Keywords: pyruvate kinase, genomics, proteomics, glycolysis, kinase, magnesium, pyruvate, transferase, structural genomics, structural genomics consortium, sgc
  
• 3gga.pdb. hydrolase 27-feb-09 3gga
  Title: hiv protease inhibitors with pseudo-symmetric cores
  Author: v. s. stoll
  Keywords: hydrolase, protease
  
• 3ggv.pdb. hydrolase 02-mar-09 3ggv
  Title: hiv protease, pseudo-symmetric inhibitors
  Author: v. s. stoll
  Keywords: pseudo-symmetric inhibitors, hydrolase, protease
  
• 3ggx.pdb. hydrolase 02-mar-09 3ggx
  Title: hiv protease, pseudo-symmetric inhibitors
  Author: v. s. stoll
  Keywords: pseudo-symmetric inhibitors, hydrolase, protease
  
• 3giz.pdb. immune system 07-mar-09 3giz Zn
  Title: crystal structure of the fab fragment of anti-cd20 antibody ofatumumab
  Author: j. du, h. yang, j. ding
  Keywords: 2f2, ofatumumab, hu-maxcd20, fab, antibody, fully human antibody, immune system
  
• 3gjq.pdb. apoptosis 09-mar-09 3gjq
  Title: caspase-3 binds diverse p4 residues in peptides
  Author: b. fang, g. fu, j. agniswamy, r. w. harrison, i. t. weber
  Keywords: cysteine protease, protein recognition, apoptosis, cytoplasm, hydrolase, phosphoprotein, polymorphism, protease, s-nitrosylation, thiol protease, zymogen
  
• 3gjr.pdb. apoptosis 09-mar-09 3gjr
  Title: caspase-3 binds diverse p4 residues in peptides
  Author: b. fang, g. fu, j. agniswamy, r. w. harrison, i. t. weber
  Keywords: cysteine protease, protein recognition, apoptosis, cytoplasm, hydrolase, phosphoprotein, polymorphism, protease, s-nitrosylation, thiol protease, zymogen
  
• 3gjs.pdb. apoptosis 09-mar-09 3gjs
  Title: caspase-3 binds diverse p4 residues in peptides
  Author: b. fang, g. fu, j. agniswamy, r. w. harrison, i. t. weber
  Keywords: cysteine protease, protein recognition, apoptosis, cytoplasm, hydrolase, phosphoprotein, polymorphism, protease, s-nitrosylation, thiol protease, zymogen
  
• 3gjt.pdb. apoptosis 09-mar-09 3gjt
  Title: caspase-3 binds diverse p4 residues in peptides
  Author: b. fang, g. fu, j. agniswamy, r. w. harrison, i. t. weber
  Keywords: cysteine protease, protein recognition, apoptosis, cytoplasm, hydrolase, phosphoprotein, polymorphism, protease, s-nitrosylation, thiol protease, zymogen
  
• 3gjx.pdb. protein transport 09-mar-09 3gjx Cl Mg Na
  Title: crystal structure of the nuclear export complex crm1- snurportin1-rangtp
  Author: t. monecke, t. guettler, p. neumann, a. dickmanns, d. goerlich, r. ficner
  Keywords: cytoplasm, nucleus, rna-binding, acetylation, gtp-binding, host-virus interaction, nucleotide-binding, phosphoprotein, polymorphism, protein transport, mrna transport
  
• 3glf.pdb. transferase/dna 12-mar-09 3glf Mg F Be Zn
  Title: crystal structure of the ecoli clamp loader bound to primer- template dna
  Author: k. r. simonetta, j. kuriyan
  Keywords: transferase/dna complex
  
• 3glg.pdb. transferase/dna 12-mar-09 3glg Mg F Be Zn
  Title: crystal structure of a mutant (gammat157a) e. coli clamp loader bound to primer-template dna
  Author: k. r. simonetta, s. n. seyedin, j. kuriyan
  Keywords: transferase/dna complex
  
• 3glh.pdb. transferase 12-mar-09 3glh
  Title: crystal structure of the e. coli clamp loader bound to psi peptide
  Author: s. l. kazmirski, k. r. simonetta, j. kuriyan
  Keywords: gamma complex, replication, psi, dna replication, dna-directed dna polymerase, nucleotidyltransferase, transferase, atp-binding, nucleotide-binding, ribosomal frameshifting
  
• 3gli.pdb. transferase/dna 12-mar-09 3gli Mg F Be Zn
  Title: crystal structure of the e. coli clamp loader bound to primer-template dna and psi peptide
  Author: k. r. simonetta, a. j. cantor, j. kuriyan
  Keywords: transferase/dna complex
  
• 3glp.pdb. rna 12-mar-09 3glp
  Title: 1.23 a resolution x-ray structure of (gcugcugc)2
  Author: a. kiliszek, r. kierzek, w. j. krzyzosiak, w. rypniewski
  Keywords: rna, myotonic dystrophy, cug repeats
  
• 3gm7.pdb. rna 13-mar-09 3gm7
  Title: 1.58 a resolution x-ray structure of (cug)6
  Author: a. kiliszek, r. kierzek, w. j. krzyzosiak, w. rypniewski
  Keywords: rna, myotonic dystrophy, cug repeats
  
• 3gnj.pdb. structural genomics, unknown function 17-mar-09 3gnj Se
  Title: the crystal structure of a thioredoxin-related protein from desulfitobacterium hafniense dcb
  Author: k. tan, l. volkart, m. gu, j. n. kinney, g. babnigg, c. kerfeld, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: thioredoxin, desulfitobacterium hafniense dcb, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
  
• 3gq7.pdb. viral protein 24-mar-09 3gq7 Mg Ca
  Title: crystal structure of the bacteriophage phi29 gene product 12 n-terminal fragment
  Author: y. xiang, m. g. rossmann
  Keywords: beta helix, viral protein
  
• 3gq8.pdb. viral protein 24-mar-09 3gq8 Mg Ca
  Title: crystal structure of the bacteriophage phi29 gene product 12 n-terminal fragment in complex with 2-(n- cyclohexylamino)ethane sulfonic acid (ches)
  Author: y. xiang, m. g. rossmann
  Keywords: beta helix, viral protein
  
• 3gq9.pdb. viral protein 24-mar-09 3gq9 Na
  Title: crystal structure of the bacteriophage phi29 gene product 12 n-terminal fragment in an apo form
  Author: y. xiang, m. g. rossmann
  Keywords: beta helix, viral protein
  
• 3gqa.pdb. viral protein 24-mar-09 3gqa Co
  Title: crystal structure of the bacteriophage phi29 gene product 12 n-terminal fragment in complex with cobalt ions
  Author: y. xiang, m. g. rossmann
  Keywords: beta helix, viral protein
  
• 3gqh.pdb. viral protein 24-mar-09 3gqh
  Title: crystal structure of the bacteriophage phi29 gene product 12 c-terminal fragment
  Author: y. xiang, m. g. rossmann
  Keywords: viral protein
  
• 3gqk.pdb. viral protein 24-mar-09 3gqk Mg
  Title: crystal structure of the bacteriophage phi29 gene product 12 c-terminal fragment in complex with atp
  Author: y. xiang, m. g. rossmann
  Keywords: viral protein
  
• 3gqn.pdb. viral protein 24-mar-09 3gqn Mg Ca
  Title: crystal structure of the pre-mature bacteriophage phi29 gene product 12
  Author: y. xiang, m. g. rossmann
  Keywords: beta helix, beta barrel, atp binding, viral protein
  
• 3gqx.pdb. rna binding protein 24-mar-09 3gqx I
  Title: pyrococcus horikoshii nop5 rna binding domain from a twinned crystal form
  Author: f. e. reyes, j. w. hardin, r. t. batey
  Keywords: rna binding protein
  
• 3guc.pdb. transferase 29-mar-09 3guc Zn
  Title: human ubiquitin-activating enzyme 5 in complex with amppnp
  Author: j. r. walker, j. p. bacik, y. li, j. weigelt, c. bountra, c. h. arrowsmith, a. m. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
  Keywords: atp-binding, ubl conjugation pathway, transferase, structural genomics, structural genomics consortium, sgc
  
• 3gx9.pdb. oxidoreductase 02-apr-09 3gx9
  Title: structure of morphinone reductase n189a mutant in complex with tetrahydronad
  Author: p. lafite, n. s. scrutton, d. leys
  Keywords: flavoprotein, nadh, morphinone reductase, hydride transfer, oxidoreductase
  
• 3gxt.pdb. hydrolase 02-apr-09 3gxt
  Title: crystal structure of alpha-galactosidase a at ph 4.5 complexed with 1-deoxygalactonijirimycin
  Author: r. l. lieberman
  Keywords: disease mutation, disulfide bond, glycoprotein, glycosidase, lysosome, pharmaceutical, rna editing
  
• 3gxw.pdb. transcription 03-apr-09 3gxw Na Se
  Title: structure of the sh2 domain of the candida glabrata transcription elongation factor spt6, crystal form a
  Author: s. dengl, a. mayer, m. sun, p. cramer
  Keywords: three stranded anti-parallel beta sheet, n- terminal alpha helix, c-terminal alpha helix, nucleus, sh2 domain, transcription, transcription regulation
  
• 3gxx.pdb. transcription 03-apr-09 3gxx Se
  Title: structure of the sh2 domain of the candida glabrata transcription elongation factor spt6, crystal form b
  Author: s. dengl, a. mayer, m. sun, p. cramer
  Keywords: three stranded anti-parallel beta sheet, n- terminal alpha helix, c-terminal alpha helix, nucleus, sh2 domain, transcription, transcription regulation
  
• 3h1c.pdb. transferase 11-apr-09 3h1c W
  Title: crystal structure of polynucleotide phosphorylase (pnpase) core bound to rnase e and tungstate
  Author: s. nurmohamed
  Keywords: rna turnover, transferase, cytoplasm, nucleotidyltransferase, rna-binding, stress response, endonuclease, hydrolase, nuclease
  
• 3h3c.pdb. transferase 16-apr-09 3h3c F
  Title: crystal structure of pyk2 in complex with sulfoximine- substituted trifluoromethylpyrimidine analog
  Author: s. han, a. mistry
  Keywords: kinase, alternative splicing, atp-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein, polymorphism, transferase, tyrosine-protein kinase
  
• 3h42.pdb. hydrolase/immune system 17-apr-09 3h42 Na
  Title: crystal structure of pcsk9 in complex with fab from ldlr competitive antibody
  Author: d. e. piper, n. p. c. walker, w. g. romanow, s. t. thibault, m. m. tsai, e. yang
  Keywords: protease, secreted, serine protease, steroid metabolism, zymogen, hydrolase/immune system complex
  
• 3h4r.pdb. hydrolase 20-apr-09 3h4r
  Title: crystal structure of e. coli rece exonuclease
  Author: c. e. bell, j. zhang
  Keywords: recombination, hydrolase, nuclease
  
• 3h5q.pdb. transferase 22-apr-09 3h5q Se
  Title: crystal structure of a putative pyrimidine-nucleoside phosphorylase from staphylococcus aureus
  Author: i. a. shumilin, m. zimmerman, m. cymborowski, t. skarina, o. onopriyenko, w. f. anderson, a. savchenko, w. minor, center for structural genomics of infectious diseases (csgid)
  Keywords: glycosyltransferase, transferase, center for structural genomics of infectious diseases, csgid
  
• 3h6g.pdb. membrane protein 23-apr-09 3h6g Ca
  Title: crystal structure of the glur6 amino terminal domain dimer assembly
  Author: j. kumar, m. l. mayer
  Keywords: ubl conjugation
  
• 3h6h.pdb. membrane protein 23-apr-09 3h6h Ca
  Title: crystal structure of the glur6 amino terminal domain dimer assembly mpd form
  Author: j. kumar, m. l. mayer
  Keywords: ubl conjugation
  
• 3h74.pdb. transferase 24-apr-09 3h74 Se
  Title: crystal structure of pyridoxal kinase from lactobacillus plantarum
  Author: a. bagaria, d. kumaran, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
  Keywords: psi-ii, 11208c, structural genomics, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, kinase, transferase
  
• 3h7c.pdb. hydrolase 24-apr-09 3h7c Cl Mg K Na Se
  Title: crystal structure of arabidopsis thaliana agmatine deiminase from cell free expression
  Author: e. s. burgie, c. a. bingman, g. n. phillips jr. , center for high- throughput structural biology (chtsb)
  Keywords: center for high-throughput structural biology, chtsb, polyamine biosynthesis
  
• 3h7k.pdb. hydrolase 27-apr-09 3h7k Cl Mg Na Se
  Title: crystal structure of arabidopsis thaliana agmatine deiminase complexed with a covalently bound reaction intermediate
  Author: e. s. burgie, c. a. bingman, g. n. phillips jr. , center for eukaryotic structural genomics (cesg)
  Keywords: structural genomics, protein structure initiative, psi, center for eukaryotic structural genomics, cesg, n- carbamoylputrescine, arginine decarboxylase pathway, hydrolase, polyamine biosynthesis
  
• 3h80.pdb. chaperone 28-apr-09 3h80 Mg
  Title: crystal structure of the amino-terminal domain of hsp90 from leishmania major, lmjf33.0312:m1-k213
  Author: a. k. wernimont, w. tempel, y. h. lin, a. hutchinson, f. mackenzie, a. fairlamb, i. kozieradzki, d. cossar, y. zhao, m. schapira, a. bochkarev, c. h. arrowsmith, c. bountra, j. weigelt, a. m. edwards, m. a. j. ferguson, r. hui, j. c. pizarro, t. hills, structural genomics consortium (sgc)
  Keywords: leishmania, heat shock protein, structural genomics, stress response protein, chaperone, structural genomics consortium, sgc
  
• 3h8m.pdb. transferase 29-apr-09 3h8m
  Title: sam domain of human ephrin type-a receptor 7 (epha7)
  Author: j. r. walker, l. yermekbayeva, c. butler-cole, c. bountra, j. weigelt, c. h. arrowsmith, a. m. edwards, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
  Keywords: transmembrane, tyrosine-protein kinase
  
• 3h8t.pdb. heme-binding protein 29-apr-09 3h8t Fe
  Title: structure of porphyromonas gingivalis heme-binding protein hmuy in complex with heme
  Author: h. wojtowicz, t. guevara, c. tallant, m. olczak, a. sroka, j. potempa, m. sola, t. olczak, f. x. gomis-ruth
  Keywords: bacterial virulence factor, heme-binding protein, periodontitis
  
• 3h8v.pdb. transferase 29-apr-09 3h8v Zn
  Title: human ubiquitin-activating enzyme 5 in complex with atp
  Author: j. r. walker, j. p. bacik, n. rastgoo, j. weigelt, c. bountra, a. m. edwards, c. h. arrowsmith, a. bochkarev, s. dhe-paganon, structural genomics consortium (sgc)
  Keywords: atp-binding, ubl conjugation pathway, transferase, structural genomics consortium, sgc
  
• 3h9e.pdb. oxidoreductase 30-apr-09 3h9e
  Title: crystal structure of human sperm-specific glyceraldehyde-3- phosphate dehydrogenase (gapds) complex with nad and phosphate
  Author: a. chaikuad, n. shafqat, w. yue, r. cocking, f. von delft, c. h. arrowsmith, a. m. edwards, j. weigelt, c. bountra, u. oppermann, structural genomics consortium (sgc)
  Keywords: structural genomics, structural genomics consortium, sgc, cytoplasm, glycolysis, nad, phosphoprotein, polymorphism
  
• 3ha2.pdb. oxidoreductase 30-apr-09 3ha2 Se
  Title: crystal structure of protein (nadph-quinone reductase) from p.pentosaceus, northeast structural genomics consortium target ptr24a
  Author: a. kuzin, m. su, j. seetharaman, s. sahdev, r. xiao, c. ciccosanti, m. maglaqui, j. k. everett, r. nair, t. b. acton, b. rost, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
  Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics, consortium, nesg, ptr24a, northeast structural genomics consortium, flavoprotein, oxidoreductase
  
• 3hbk.pdb. hydrolase 04-may-09 3hbk Se
  Title: crystal structure of putative glycosyl hydrolase, was domain of unknown function (duf1080) (yp_001302580.1) from parabacteroides distasonis atcc 8503 at 2.36 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: putative glycosyl hydrolase, was domain of unknown function (duf1080), structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, unknown function
  
• 3hbm.pdb. hydrolase 04-may-09 3hbm Se
  Title: crystal structure of pseg from campylobacter jejuni
  Author: e. s. rangarajan, a. proteau, m. cygler, a. matte, t. sulea, i. c. schoenhofen
  Keywords: pseg
  
• 3hbn.pdb. hydrolase 04-may-09 3hbn Cl Se
  Title: crystal structure pseg-udp complex from campylobacter jejuni
  Author: e. s. rangarajan, a. proteau, m. cygler, a. matte, t. sulea, i. c. schoenhofen
  Keywords: pseg
  
• 3hbw.pdb. hormone 05-may-09 3hbw
  Title: crystal structure of human fibroblast growth factor homologous factor 2a (fhf2a), also referred to as fibroblast growth factor 13a (fgf13a)
  Author: m. mohammadi
  Keywords: alternative splicing, growth factor, polymorphism, hormone
  
• 3hbz.pdb. structural genomics, unknown function 05-may-09 3hbz Na Ca Se As
  Title: crystal structure of putative glycoside hydrolase (np_810994.1) from bacteriodes thetaiotaomicron vpi-5482 at 2.05 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: putative glycoside hydrolase, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, unknown function
  
• 3hcs.pdb. signaling protein 06-may-09 3hcs Zn
  Title: crystal structure of the n-terminal domain of traf6
  Author: q. yin, s. -c. lin, b. lamothe, m. lu, y. -c. lo, g. hura, l. zheng, r. l. rich, a. d. campos, d. g. myszka, m. j. lenardo, b. g. darnay, h. wu
  Keywords: beta-beta-alpha, coiled coil, cytoplasm, metal- binding, ubl conjugation, ubl conjugation pathway, zinc, zinc-finger, signaling protein
  
• 3hct.pdb. signaling protein/ligase 06-may-09 3hct Zn
  Title: crystal structure of traf6 in complex with ubc13 in the p1 space group
  Author: q. yin, s. -c. lin, b. lamothe, m. lu, y. -c. lo, g. hura, l. zheng, r. l. rich, a. d. campos, d. g. myszka, m. j. lenardo, b. g. darnay, h. wu
  Keywords: signaling protein/ligase complex
  
• 3hcu.pdb. signaling protein/ligase 06-may-09 3hcu Zn
  Title: crystal structure of traf6 in complex with ubc13 in the c2 space group
  Author: q. yin, s. -c. lin, b. lamothe, m. lu, y. -c. lo, g. hura, l. zheng, r. l. rich, a. d. campos, d. g. myszka, m. j. lenardo, b. g. darnay, h. wu
  Keywords: signaling protein/ligase complex
  
• 3hcy.pdb. structural genomics, unknown function 06-may-09 3hcy
  Title: the crystal structure of the domain of putative two- component sensor histidine kinase protein from sinorhizobium meliloti 1021
  Author: r. zhang, x. xu, h. cui, a. savchenko, a. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: structural genomics, psi, mcsg, protein structure initiative, midwest center for structural genomics, kinase, plasmid, unknown function
  
• 3hdc.pdb. oxidoreductase 07-may-09 3hdc Se
  Title: the crystal structure of thioredoxin protein from geobacter metallireducens
  Author: z. zhang, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
  Keywords: geobacter metallireducens, gs-15, atcc53774, dsm 7210, 11211i, , structural genomics, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, oxidoreductas...
  
• 3hdp.pdb. lyase 07-may-09 3hdp Ni
  Title: crystal structure of the ni(ii)-bound glyoxalase-i from clostridium acetobutylicum
  Author: l. satyanarayana, s. eswaramoorthy, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
  Keywords: lyase, glyoxalase, methylglyoxal,11003p,psi2, structural genomic,nysgxrc., structural genomics, protein structure initiative, new york sgx research center for structural genomics
  
• 3hdt.pdb. structural genomics, unknown function 07-may-09 3hdt Cl Se
  Title: crystal structure of putative kinase from clostridium symbiosum atcc 14940
  Author: c. chang, l. freeman, r. jedrzejczak, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: putative kinase, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
  
• 3hdv.pdb. transcription regulator 07-may-09 3hdv Se
  Title: crystal structure of response regulator receiver protein from pseudomonas putida
  Author: a. bagaria, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
  Keywords: psi-ii, 11224l, structural genomics, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, transcription regulator
  
• 3hf7.pdb. structural genomics, unknown function 11-may-09 3hf7
  Title: the crystal structure of a cbs-domain pair with bound amp from klebsiella pneumoniae to 2.75a
  Author: a. j. stein, b. nocek, r. wu, j. bearden, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: amp, klebsiella, pneumoniae, psi, mcsg, structural genomics, midwest center for structural genomics, protein structure initiative, cell membrane, membrane, transmembrane, unknown function
  
• 3hfd.pdb. chaperone, protein transport 11-may-09 3hfd
  Title: nucleosome assembly protein 1 from plasmodium knowlesi
  Author: t. arakaki, e. a. merritt, medical structural genomics of pathogenic protozoa (msgpp)
  Keywords: structural genomics, medical structural genomics of pathogenic protozoa, msgpp, chaperone, protein transport
  
• 3hfi.pdb. structural genomics, unknown function 11-may-09 3hfi
  Title: the crystal structure of the putative regulator from escherichia coli cft073
  Author: r. zhang, x. xu, h. zheng, a. savchenko, a. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: structural geonomics, psi, mcsg, structural genomics, protein structure initiative, midwest center for structural genomics, dna-binding, transcription, transcription regulation, unknown function
  
• 3hfq.pdb. structural genomics, unknown function 12-may-09 3hfq Se
  Title: crystal structure of the lp_2219 protein from lactobacillus plantarum. northeast structural genomics consortium target lpr118.
  Author: s. m. vorobiev, l. scott, s. schauder, r. xiao, c. ciccosanti, e. l. foote, m. maglaqui, j. k. everett, r. nair, t. b. acton, b. rost, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
  Keywords: lp_2219,nesg, lpr118, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, unknown function
  
• 3hg7.pdb. oxidoreductase 13-may-09 3hg7
  Title: crystal structure of d-isomer specific 2-hydroxyacid dehydrogenase family protein from aeromonas salmonicida subsp. salmonicida a449
  Author: v. n. malashkevich, r. toro, c. morano, m. j. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
  Keywords: new york sgx research center for structural genomics
  
• 3hg9.pdb. structural genomics, unknown function 13-may-09 3hg9 Ni
  Title: crystal structure of putative pilm protein from pseudomonas aeruginosa 2192
  Author: v. n. malashkevich, r. toro, m. j. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
  Keywords: new york sgx research center for structural genomics
  
• 3hgb.pdb. oxidoreductase 13-may-09 3hgb
  Title: crystal structure of glycine cleavage system protein h from mycobacterium tuberculosis
  Author: seattle structural genomics center for infectious disease (ssgcid)
  Keywords: niaid, decode, uw, sbri, lipoyl, structural genomics, seattle structural genomics center for infectious disease, unknown function, oxidoreductase
  
• 3hh0.pdb. transcription regulator 14-may-09 3hh0 Se
  Title: crystal strucure of a transcriptional regulator, merr family from bacillus cereus
  Author: k. palani, z. zhang, s. k. burley, s. swaminathan, new york structural genomix research consortium (nysgxrc)
  Keywords: merr, protein structure initiative ii(psi ii), nysgxrc, 11183j, structural genomics, new york structural genomix research consortium, dna- binding, transcription regulator
  
• 3hhe.pdb. isomerase 15-may-09 3hhe Cl K
  Title: crystal structure of ribose-5-phosphate isomerase a from bartonella henselae
  Author: seattle structural genomics center for infectious disease (ssgcid)
  Keywords: ssgcid, decode, sbri, uw, bartonella, isomerase, structural genomics, seattle structural genomics center for infectious disease
  
• 3hhj.pdb. hydrolase 15-may-09 3hhj Mg
  Title: crystal structure of mutator mutt from bartonella henselae
  Author: seattle structural genomics center for infectious disease (ssgcid)
  Keywords: ssgcid, decode, uw, sbri, infectious diseases, hydrolase, structural genomics, seattle structural genomics center for infectious disease
  
• 3hho.pdb. chaperone 15-may-09 3hho Ca Se
  Title: chaperone hscb from vibrio cholerae
  Author: j. osipiuk, m. gu, l. papazisi, w. f. anderson, a. joachimiak, center for structural genomics of infectious diseases (csgid)
  Keywords: idp01304, chaperone, hscb, hsc20, center for structural genomics of infectious diseases, csgid
  
• 3him.pdb. transcription regulator 20-may-09 3him
  Title: the crystal structure of a bacterial regulatory protein in the tetr family from rhodococcus rha1 to 2.2a
  Author: a. j. stein, t. a. binkowski, e. evdokimova, o. kagan, a. edwards, a. savchenko, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: transcription regulator
  
• 3hix.pdb. structural genomics, unknown function 20-may-09 3hix Mn Se
  Title: crystal structure of the rhodanese_3 like domain from anabaena sp alr3790 protein. northeast structural genomics consortium target nsr437i
  Author: s. vorobiev, y. chen, f. forouhar, m. maglaqui, c. ciccosanti, l. mao, r. xiao, t. b. acton, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
  Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, unknown function
  
• 3iy0.pdb. immune system 07-apr-09 3iy0 (electron microscopy)
  Title: variable domains of the x-ray structure of fab 14 fitted into the cryoem reconstruction of the virus-fab 14 complex
  Author: s. hafenstein, v. d. bowman, t. sun, c. d. nelson, l. m. palermo, p. r. chipman, a. j. battisti, c. r. parrish, m. g. rossmann
  Keywords: neutralizing antibody, parvovirus, canine, feline, fab footprint, immune system
  
• 3iy1.pdb. immune system 09-apr-09 3iy1 (electron microscopy)
  Title: variable domains of the wam of fab b fitted into the cryoem reconstruction of the virus-fab b complex
  Author: s. hafenstein, v. d. bowman, t. sun, c. d. nelson, l. m. palermo, a. j. battisti, c. r. parrish, m. g. rossmann
  Keywords: neutralizing antibody, parvovirus, canine, feline, fab footprint, immune system
  
• 3iy2.pdb. immune system 09-apr-09 3iy2 (electron microscopy)
  Title: variable domains of the computer generated model (wam) of fab 6 fitted into the cryoem reconstruction of the virus- fab 6 complex
  Author: s. hafenstein, v. d. bowman, t. sun, c. d. nelson, l. m. palermo, p. r. chipman, a. j. battisti, c. r. parrish, m. g. rossmann
  Keywords: neutralizing antibody, parvovirus, canine, feline, fab footprint, immune system
  
• 3iy3.pdb. immune system 09-apr-09 3iy3 (electron microscopy)
  Title: variable domains of the computer generated model (wam) of fab 8 fitted into the cryoem reconstruction of the virus- fab 8 complex
  Author: s. hafenstein, v. d. bowman, t. sun, c. d. nelson, l. m. palermo, p. r. chipman, a. j. battisti, c. r. parrish, m. g. rossmann
  Keywords: neutralizing antibody, parvovirus, canine, feline, fab footprint, immune system
  
• 3iy4.pdb. immune system 09-apr-09 3iy4 (electron microscopy)
  Title: variable domains of the computer generated model (wam) of fab 15 fitted into the cryoem reconstruction of the virus- fab 15 complex
  Author: s. hafenstein, v. d. bowman, t. sun, c. d. nelson, l. m. palermo, p. r. chipman, a. j. battisti, c. r. parrish, m. g. rossmann
  Keywords: neutralizing antibody, parvovirus, canine, feline, fab footprint, immune system
  
• 3iy5.pdb. immune system 09-apr-09 3iy5 (electron microscopy)
  Title: variable domains of the mouse fab (1aif) fitted into the cryoem reconstruction of the virus-fab 16 complex
  Author: s. hafenstein, v. d. bowman, t. sun, c. d. nelson, l. m. palermo, p. r. chipman, a. j. battisti, c. r. parrish, m. g. rossmann
  Keywords: neutralizing antibody, parvovirus, canine, feline, fab footprint, immune system
  
• 3iy6.pdb. immune system 09-apr-09 3iy6 (electron microscopy)
  Title: variable domains of the computer generated model (wam) of fab e fitted into the cryoem reconstruction of the virus- fab e complex
  Author: s. hafenstein, v. d. bowman, t. sun, c. d. nelson, l. m. palermo, p. r. chipman, a. j. battisti, c. r. parrish, m. g. rossmann
  Keywords: neutralizing antibody, parvovirus, canine, feline, fab footprint, immune system
  
• 3iy7.pdb. immune system 09-apr-09 3iy7 (electron microscopy)
  Title: variable domains of the computer generated model (wam) of fab f fitted into the cryoem reconstruction of the virus- fab f complex
  Author: s. hafenstein, v. d. bowman, t. sun, c. d. nelson, l. m. palermo, p. r. chipman, a. j. battisti, c. r. parrish, m. g. rossmann
  Keywords: neutralizing antibody, parvovirus, canine, feline, fab footprint, immune system
  
• 422d.pdb. rna 10-sep-98 422d
  Title: 5'-r(*gp*ap*up*cp*ap*cp*up*up*cp*gp*gp*u)-3'
  Author: s. eswaramoorthy, s. t. rao, m. sundaralingam
  Keywords: rna