Recent PDB releases or updates: week of 22 May 2009
- 175d.pdb.
dna 29-apr-94 175d
Ho
(solution NMR)
Title: the dna sequence gcgaatgagc containing the human centromere core sequence gaat forms a self-complementary duplex with sheared g:a pairs in solution
Author: s. -h. chou, j. -w. cheng, o. fedoroff, b. r. reid
Keywords: nmr, double helix, sheared g:a pairs
- 1a5e.pdb.
anti-oncogene 13-feb-98 1a5e
He Hg
(solution NMR)
Title: solution nmr structure of tumor suppressor p16ink4a, 18 structures
Author: i. -j. l. byeon, j. li, k. ericson, t. l. selby, a. tevelev, h. -j. kim, p. o'maille, m. -d. tsai
Keywords: anti-oncogene, repeat, ank repeat
- 1a6h.pdb.
dna 25-feb-98 1a6h
Ho
(solution NMR)
Title: dna quadruplex containing gcgc tetrad, nmr, 4 structures
Author: a. kettani, r. a. kumar, d. j. patel
Keywords: dna quadruplex, fragile x syndrome, d(cgg) triplet repeat, gcgc tetrads
- 1abt.pdb.
toxin 17-nov-93 1abt
He Hg
(solution NMR)
Title: nmr solution structure of an alpha-bungarotoxin(slash) nicotinic receptor peptide complex
Author: v. j. basus, g. song, e. hawrot
- 1abv.pdb.
atp synthesis 29-jan-97 1abv
He Hg
(solution NMR)
Title: n-terminal domain of the delta subunit of the f1f0-atp synthase from escherichia coli, nmr, minimized average structure
Author: s. wilkens, s. d. dunn, j. chandler, f. w. dahlquist, r. a. capaldi
Keywords: atp synthase, f1-atpase, delta subunit, nmr spectroscopy
- 1abz.pdb.
de novo design 31-jan-97 1abz
He Hg
(solution NMR)
Title: alpha-t-alpha, a de novo designed peptide, nmr, 23 structures
Author: y. fezoui, p. j. connolly, j. j. osterhout
Keywords: helix-turn-helix, peptide
- 1ac0.pdb.
hydrolase 10-feb-97 1ac0
He Hg
(solution NMR)
Title: glucoamylase, granular starch-binding domain complex with cyclodextrin, nmr, minimized average structure
Author: k. sorimachi, m. -f. le gal-coeffet, g. williamson, d. b. archer, m. p. williamson
Keywords: starch binding domain
- 1aca.pdb.
acyl-coenzyme a binding protein 17-nov-92 1aca
He Hg Ho
(solution NMR)
Title: three-dimensional structure of the complex between acyl- coenzyme a binding protein and palmitoyl-coenzyme a
Author: b. b. kragelund, k. v. andersen, j. c. madsen, j. knudsen, f. m. poulsen
- 1adn.pdb.
transcription regulation 30-sep-93 1adn
Zn
(solution NMR)
Title: solution structure of the dna methylphosphotriester repair domain of escherichia coli ada
Author: l. c. myers, g. l. verdine, g. wagner
- 1agg.pdb.
neurotoxin 03-nov-95 1agg
Hg
(solution NMR)
Title: the solution structure of omega-aga-ivb, a p-type calcium channel antagonist from the venom of agelenopsis aperta
Author: m. d. reily, v. thanabal, m. e. adams
Keywords: p-type calcium channel antagonist
- 1aj4.pdb.
muscle protein 14-may-97 1aj4
He Hg Ca
(solution NMR)
Title: structure of calcium-saturated cardiac troponin c, nmr, 1 structure
Author: s. k. sia, m. x. li, l. spyracopoulos, s. m. gagne, w. liu, j. a. putkey, b. d. sykes
Keywords: muscle protein, regulatory, calcium binding
- 1gct.pdb.
hydrolase (serine proteinase) 04-sep-90 1gct
Title: is gamma-chymotrypsin a tetrapeptide acyl-enzyme adduct of gamma-chymotrypsin?
Author: m. m. dixon, b. w. matthews
- 1gt7.pdb.
lyase 14-jan-02 1gt7
Zn
Title: l-rhamnulose-1-phosphate aldolase from escherichia coli
Author: m. kroemer, g. e. schulz
Keywords: aldolase (lyase), class ii, zinc enzyme, bacterial l- rhamnose metabolism, cleavage of l-rhamnulose-1-phosphate to dihydroxyacetonephosphate and l-lactaldehyde
- 1huy.pdb.
luminescent protein 04-jan-01 1huy
Title: crystal structure of citrine, an improved yellow variant of green fluorescent protein
Author: o. griesbeck, g. s. baird, r. e. campbell, d. a. zacharias, r. y. tsien
Keywords: chromophore, luminescent protein
- 1jby.pdb.
luminescent protein 07-jun-01 1jby
Title: crystal structure analysis of a dual-wavelength emission green fluorescent protein variant at low ph
Author: g. t. hanson, t. b. mcananey, e. s. park, m. e. p. rendell, d. k. yarbrough, s. chu, l. xi, s. g. boxer, m. h. montrose, s. j. remington
Keywords: chromophore, luminescent protein
- 1jbz.pdb.
luminescent protein 07-jun-01 1jbz
Mg
Title: crystal structure analysis of a dual-wavelength emission green fluorescent protein variant at high ph
Author: g. t. hanson, t. b. mcananey, e. s. park, m. e. p. rendell, d. k. yarbrough, s. chu, l. xi, s. g. boxer, m. h. montrose, s. j. remington
Keywords: chromophore, luminescent protein
- 1n55.pdb.
isomerase 04-nov-02 1n55
Title: 0.83a resolution structure of the e65q mutant of leishmania mexicana triosephosphate isomerase complexed with 2- phosphoglycolate
Author: i. kursula, r. k. wierenga
Keywords: atomic resolution, enzyme-ligand complex, transition- state analogue, low-barrier hydrogen bond, isomerase
- 1qyf.pdb.
luminescent protein 10-sep-03 1qyf
Mg
Title: crystal structure of matured green fluorescent protein r96a variant
Author: d. p. barondeau, c. d. putnam, c. j. kassmann, j. a. tainer, e. d. getzoff
Keywords: chromophore, luminescent protein
- 1qyq.pdb.
luminescent protein 11-sep-03 1qyq
Title: crystal structure of the cyclized s65g y66g gfp variant
Author: d. p. barondeau, c. d. putnam, c. j. kassmann, j. a. tainer, e. d. getzoff
Keywords: chromophore, post-translational modification, luminescent protein
- 1rm9.pdb.
luminescent protein 27-nov-03 1rm9
F
Title: probing the role of tryptophans in aequorea victoria green fluorescent proteins with an expanded genetic code
Author: n. budisa, p. p. pal, s. alefelder, p. birle, t. krywcun, m. rubini, w. wenger, j. h. bae, t. steiner
Keywords: luminescent protein
- 1rmm.pdb.
luminescent protein 28-nov-03 1rmm
Se
Title: probing the role of tryptophans in aequorea victoria green fluorescent proteins with an expanded genetic code
Author: n. budisa, p. p. pal, s. alefelder, p. birle, t. krywcun, m. rubini, w. wenger, j. h. bae, t. steiner
Keywords: luminescent protein
- 1rmo.pdb.
luminescent protein 28-nov-03 1rmo
Title: probing the role of tryptophans in aequorea victoria green fluorescent proteins with an expanded genetic code
Author: n. budisa, p. p. pal, s. alefelder, p. birle, t. krywcun, m. rubini, w. wenger, j. h. bae, t. steiner
Keywords: luminescent protein
- 1rmp.pdb.
luminescent protein 28-nov-03 1rmp
Se
Title: probing the role of tryptophans in aequorea victoria green fluorescent proteins with an expanded genetic code
Author: n. budisa, p. p. pal, s. alefelder, p. birle, t. krywcun, m. rubini, w. wenger, j. h. bae, t. steiner
Keywords: luminescent protein
- 1rrx.pdb.
luminescent protein 09-dec-03 1rrx
F
Title: crystallographic evidence for isomeric chromophores in 3- fluorotyrosyl-green fluorescent protein
Author: j. h. bae, p. paramita pal, l. moroder, r. huber, n. budisa
Keywords: egfp, non-canonical amino acid, chromophore isomerisation, luminescent protein
- 1s6z.pdb.
luminescent protein 28-jan-04 1s6z
Cl
Title: enhanced green fluorescent protein containing the y66l substitution
Author: m. a. rosenow, h. a. huffman, m. e. phail, r. m. wachter
Keywords: eleven-stranded beta barrel, trapped intermediate, backbone cyclization, gfp-like protein, luminescent protein
- 1w7w.pdb.
transferase 13-sep-04 1w7w
Title: structure and mutational analysis of a plant mitochondrial nucleoside diphosphate kinase: identification of residues involved in serine phosphorylation and oligomerization.
Author: m. johansson, a. mackenzie-hose, i. andersson, c. knorpp
Keywords: ndpk3, pisum sativum, transferase, kinase
- 1xm8.pdb.
hydrolase 01-oct-04 1xm8
Zn Fe
Title: x-ray structure of glyoxalase ii from arabidopsis thaliana gene at2g31350
Author: g. e. wesenberg, d. w. smith, g. n. phillips jr. , e. bitto, c. a. bingman, s. t. m. allard, center for eukaryotic structural genomics (cesg)
Keywords: center for eukaryotic structural genomics
- 1yfp.pdb.
luminescence 28-aug-98 1yfp
Title: structure of yellow-emission variant of gfp
Author: r. m. wachter, m. -a. elsliger, k. kallio, g. t. hanson, s. j. remington
Keywords: green fluorescent protein, yellow-emission variant, bioluminescence, photoactive protein, fluorescent tag
- 2cjf.pdb.
lyase 31-mar-06 2cjf
Title: type ii dehydroquinase inhibitor complex
Author: r. j. payne, a. riboldi-tunnicliffe, a. d. abell, a. j. lapthorn, c. abell
Keywords: shikimate pathway, dehydroquinate, drug design, lyase, amino-acid biosynthesis, aromatic amino acid biosynthesis
- 2d4a.pdb.
oxidoreductase 12-oct-05 2d4a
Title: structure of the malate dehydrogenase from aeropyrum pernix
Author: r. kawakami, h. sakuraba, h. tsuge, t. ohshima
Keywords: archaea, hyperthermophile, oxidoreductase
- 2e2n.pdb.
transferase 15-nov-06 2e2n
Title: crystal structure of sulfolobus tokodaii hexokinase in the apo form
Author: h. nishimasu, s. fushinobu, h. shoun, t. wakagi
Keywords: hsp70, actin superfamily, transferase
- 2e2o.pdb.
transferase 15-nov-06 2e2o
Title: crystal structure of sulfolobus tokodaii hexokinase in complex with glucose
Author: h. nishimasu, s. fushinobu, h. shoun, t. wakagi
Keywords: hsp70, actin superfamily, ribonuclease-h fold, sugar kinase, glucose, n- acetylglucosamine,hexokinase, conformational change, phosphoryl transfer, transferase
- 2e2p.pdb.
transferase 15-nov-06 2e2p
Title: crystal structure of sulfolobus tokodaii hexokinase in complex with adp
Author: h. nishimasu, s. fushinobu, h. shoun, t. wakagi
Keywords: ribonuclease-h fold, sugar kinase, glucose, n- acetylglucosamine,hexokinase, conformational change, phosphoryl transfer, transferase
- 2e2q.pdb.
transferase 15-nov-06 2e2q
Mg
Title: crystal structure of sulfolobus tokodaii hexokinase in complex with xylose, mg2+, and adp
Author: h. nishimasu, s. fushinobu, h. shoun, t. wakagi
Keywords: ribonuclease-h fold, sugar kinase, glucose, n- acetylglucosamine,hexokinase, conformational change, phosphoryl transfer, transferase
- 2emd.pdb.
luminescence 31-mar-97 2emd
Title: green fluorescent protein from aequorea victoria, mutant
Author: g. palm, a. zdanov, a. wlodawer
Keywords: beta-barrel, bioluminescence, luminescence
- 2emn.pdb.
luminescence 31-mar-97 2emn
Title: green fluorescent protein from aequorea victoria, mutant
Author: g. palm, a. zdanov, a. wlodawer
Keywords: beta-barrel, bioluminescence, luminescence
- 2emo.pdb.
luminescence 31-mar-97 2emo
Title: green fluorescent protein from aequorea victoria, mutant
Author: g. palm, a. zdanov, a. wlodawer
Keywords: beta-barrel, bioluminescence, luminescence
- 2exd.pdb.
membrane protein 08-nov-05 2exd
He Hg
(solution NMR)
Title: the solution structure of the c-terminal domain of a nfed homolog from pyrococcus horikoshii
Author: y. kuwahara, a. ohno, t. morii, h. tochio, m. shirakawa, h. hiroaki
Keywords: membrane protein
- 2gct.pdb.
hydrolase (serine proteinase) 04-sep-90 2gct
Title: structure of gamma-chymotrypsin in the range ph 2.0 to ph 10.5 suggests that gamma-chymotrypsin is a covalent acyl- enzyme adduct at low ph
Author: m. m. dixon, b. w. matthews
- 2h99.pdb.
transcription 09-jun-06 2h99
Cl
Title: crystal structure of the effector binding domain of a benm variant (r156h,t157s)
Author: o. c. ezezika, s. h. craven, e. l. neidle, c. momany
Keywords: benm, transcriptional regulation, catm
- 2h9b.pdb.
transcription 09-jun-06 2h9b
Cl
Title: crystal structure of the effector binding domain of a benm variant (benm r156h/t157s)
Author: o. c. ezezika, s. h. craven, e. l. neidle, c. momany
Keywords: benm, transcriptional activator, lysr-type transcriptional regulator
- 2jtd.pdb.
cell adhesion 27-jul-07 2jtd
He Hg
(solution NMR)
Title: skelemin immunoglobulin c2 like domain 4
Author: l. deshmukh, o. vinogradova
Keywords: immunoglobulin domain, muscle protein, thick filament, immune system, cell adhesion
- 2k85.pdb.
protein binding 02-sep-08 2k85
He Hg
(solution NMR)
Title: p190-a rhogap ff1 domain
Author: r. bonet, l. ruiz, p. martin-malpartida, m. macias
Keywords: transcription regulation, protein binding
- 2k8h.pdb.
signaling protein 10-sep-08 2k8h
He Hg
(solution NMR)
Title: solution structure of sumo from trypanosoma brucei
Author: q. shang, x. tu
Keywords: trypanosoma brucei, nmr, post-translational modifier, signaling protein
- 2k9f.pdb.
oxidoreductase 09-oct-08 2k9f
He
(solution NMR)
Title: structural features of the complex between the dsbd n- terminal and the pilb n-terminal domains from neisseria meningitidis
Author: m. quinternet, p. tsan, l. selme, c. jacob, s. boschi-muller, g. branlant, m. cung
Keywords: nad, transmembrane
- 2kbl.pdb.
structural protein 02-dec-08 2kbl
He Hg
(solution NMR)
Title: nmr structure of a monomeric folding intermediate reveals the structural basis for rapid assembly of an evolutionary optimized trimerization module
Author: j. habazettl, a. reiner, t. kiefhaber
Keywords: monomer of foldon, fibritin, trimer, protein assembly, protein-protein interaction, electrostatic interaction, coiled coil, structural protein
- 2kd4.pdb.
rna 02-jan-09 2kd4
Ho
(solution NMR)
Title: solution structure and thermodynamics of 2',5' rna intercalation
Author: e. d. horowitz, s. lilavivat, b. w. holladay, m. w. germann, n. v. hud
Keywords: nmr, intercalation, 2',5' rna, rna, nearest- neighbor exclusion
- 2ke3.pdb.
hydrolase 22-jan-09 2ke3
He Hg
(solution NMR)
Title: pc1/3 dcsg sorting domain in chaps
Author: j. d. dikeakos, p. di lello, m. j. lacombe, r. ghirlando, p. legault, t. l. reudelhuber, j. g. omichinski
Keywords: prohormone convertase, calcium, cleavage on pair of basic residues, cytoplasmic vesicle, glycoprotein, hydrolase, protease, serine protease, zymogen
- 2kei.pdb.
transcription/dna 30-jan-09 2kei
He Hg Ho
(solution NMR)
Title: refined solution structure of a dimer of lac repressor dna- binding domain complexed to its natural operator o1
Author: j. romanuka, g. folkers, n. biris, e. tishchenko, h. wienk, r. kaptein, r. boelens
Keywords: lac operators, nmr, protein-dna complex, dna- binding, repressor, transcription, transcription regulation, transcription/dna complex
- 2kej.pdb.
transcription/dna 30-jan-09 2kej
He Hg Ho
(solution NMR)
Title: solution structure of a dimer of lac repressor dna-binding domain complexed to its natural operator o2
Author: j. romanuka, g. folkers, n. biris, e. tishchenko, h. wienk, r. kaptein, r. boelens
Keywords: lac operators, nmr, protein-dna complex, dna- binding, repressor, transcription, transcription regulation, transcription/dna complex
- 2kek.pdb.
transcription/dna 30-jan-09 2kek
He Hg Ho
(solution NMR)
Title: solution structure of a dimer of lac repressor dna-binding domain complexed to its natural operator o3
Author: j. romanuka, g. folkers, n. biris, e. tishchenko, h. wienk, r. kaptein, r. boelens
Keywords: lac operators, nmr, protein-dna complex, dna- binding, repressor, transcription, transcription regulation, transcription/dna complex
- 2keq.pdb.
splicing 02-feb-09 2keq
He Hg
(solution NMR)
Title: solution structure of dnae intein from nostoc punctiforme
Author: j. s. oeemig, a. s. aranko, j. b. djupsj, h. iwai
Keywords: dnae intein, protein splicing, protein trans splicing
- 2kf2.pdb.
structural genomics, unknown function 11-feb-09 2kf2
He Hg
(solution NMR)
Title: solution nmr structure of of streptomyces coelicolor polyketide cyclase sco5315. northeast structural genomics consortium target rr365
Author: j. r. cort, t. a. ramelot, k. ding, h. wang, m. jiang, m. maglaqui, r. xiao, r. nair, m. c. baran, j. k. everett, g. v. t. swapna, t. b. acton, b. rost, g. t. montelione, m. a. kennedy, northeast structural genomics consortium (nesg)
Keywords: aro/cyc, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, unknown function
- 2kfs.pdb.
dna-binding protein 27-feb-09 2kfs
He Hg
(solution NMR)
Title: nmr structure of rv2175c
Author: p. barthe, m. cohen-gonsaud, c. roumestand, v. molle
Keywords: dna binding, phosphorylation, dna-binding protein
- 2kih.pdb.
transport protein 05-may-09 2kih
Hg
(solution NMR)
Title: s31n mutant of m2 proton channel
Author: r. m. pielak
Keywords: m2, proton channel, influenza, matrix protein 2, cell membrane, disulfide bond, hydrogen ion transport, ion transport, ionic channel, membrane, transmembrane, transport, virion, transport protein
- 2pjs.pdb.
structural genomics, unknown function 16-apr-07 2pjs
Zn Se
Title: crystal structure of atu1953, protein of unknown function
Author: c. chang, t. skarina, o. onopriyenko, a. savchenko, a. m. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: glyoxalase/bleomycin resistance protein/dioxygenase superfamily, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
- 2q2n.pdb.
transferase 29-may-07 2q2n
Mg
Title: crystal structure of bacillus subtilis ferrochelatase in complex with deuteroporphyrin ix 2,4-disulfonic acid dihydrochloride
Author: t. karlberg, o. h. thorvaldsen, s. al-karadaghi
Keywords: transferase
- 2qe7.pdb.
hydrolase 25-jun-07 2qe7
Title: crystal structure of the f1-atpase from the thermoalkaliphilic bacterium bacillus sp. ta2.a1
Author: a. stocker, s. keis, j. vonck, g. m. cook, p. dimroth
Keywords: f1-atpase, crystal structure, atp synthase, single particle analysis, thermoalkaliphilic, hydrolase
- 2rbh.pdb.
transferase 19-sep-07 2rbh
Title: gamma-glutamyl cyclotransferase
Author: a. j. oakley, p. g. board
Keywords: enzyme, dimer
- 2rq1.pdb.
membrane protein 09-jan-09 2rq1
He Hg
(solution NMR)
Title: solution structure of the 4.1r ferm alpha lobe domain
Author: h. kusunoki, t. kohno
Keywords: membrane protein, actin-binding, alternative splicing, cytoplasm, cytoskeleton, elliptocytosis, glycoprotein, hereditary hemolytic anemia, nucleus, phosphoprotein, polymorphism, pyropoikilocytosis
- 2v4d.pdb.
membrane protein 18-sep-08 2v4d
Title: re-refinement of mexa adaptor protein
Author: m. f. symmons, e. bokma, e. koronakis, c. hughes, v. koronakis
Keywords: periplasmic adaptor protein
- 2v50.pdb.
membrane protein 01-oct-08 2v50
Title: the missing part of the bacterial mexab-oprm system: structural determination of the multidrug exporter mexb
Author: g. sennhauser, m. a. bukowska, m. g. gruetter
Keywords: ddm, rnd, membrane, detergent, transport, cell membrane, transmembrane, membrane protein, cell inner membrane, antibiotic resistance, drug-efflux pump, transport protein
- 2v7b.pdb.
ligase 27-jul-07 2v7b
Title: crystal structures of a benzoate coa ligase from burkholderia xenovorans lb400
Author: m. j boulanger, j. bains
Keywords: benzoate oxidation, benzoate coa ligase
- 2vhi.pdb.
hydrolase 21-nov-07 2vhi
Title: crystal structure of a pyrimidine degrading enzyme from drosophila melanogaster
Author: s. lundgren, b. lohkamp, b. andersen, j. piskur, d. dobritzsch
- 2vk2.pdb.
transport 16-dec-07 2vk2
Title: crystal structure of a galactofuranose binding protein
Author: a. muller, r. horler, g. h. thomas, k. s. wilson
Keywords: galactofuranose, transport, periplasm
- 2vld.pdb.
hydrolase 14-jan-08 2vld
Se
Title: crystal structure of a repair endonuclease from pyrococcus abyssi
Author: b. ren, j. kuhn, l. meslet-cladiere, j. briffotaux, c. norais, r. lavigne, d. flament, r. ladenstein, h. myllykallio
Keywords: hydrolase
- 2vml.pdb.
photosynthesis 28-jan-08 2vml
Title: the monoclinic structure of phycocyanin from gloeobacter violaceus
Author: j. w. murray, s. benson, j. barber
Keywords: light-harvesting, electron transport, transport, chromophore, bile pigment, phycobilisome
- 2vqz.pdb.
transcription 21-mar-08 2vqz
Se
Title: structure of the cap-binding domain of influenza virus polymerase subunit pb2 with bound m7gtp
Author: d. guilligay, f. tarendeau, p. resa-infante, r. coloma, t. crepin, p. sehr, j. lewis, r. w. h. ruigrok, j. ortin, d. j. hart, s. cusack
Keywords: transcription, pb2 subunit, influenza virus, cap-binding domain
- 2vr3.pdb.
cell adhesion 25-mar-08 2vr3
Title: structural and biochemical characterization of fibrinogen binding to clfa from staphylocccus aureus
Author: v. k. ganesh, j. j. rivera, e. smeds, m. g. bowden, e. r. wann, s. gurusidappa, j. r. fitzgerald, m. hook
Keywords: peptidoglycan-anchor, cell adhesion, staphylococcus aureus, fibrinogen gamma-chain, secreted, cell wall, virulence, clumping factor
- 2vtf.pdb.
hydrolase 14-may-08 2vtf
Title: x-ray crystal structure of the endo-beta-n- acetylglucosaminidase from arthrobacter protophormiae e173q mutant reveals a tim barrel catalytic domain and two ancillary domains
Author: z. ling, r. j. bingham, m. d. l. suits, j. w. b. moir, a. j. fairbanks, e. j. taylor
Keywords: family 85, glycosidase, arthrobacter, carbohydrate binding, acetylglucosaminidase
- 2vvk.pdb.
protein-binding 09-jun-08 2vvk
Title: grb2 sh3c (1)
Author: m. harkiolaki, t. tsirka, s. m. feller
Keywords: sh3 domain, sh2 domain, phosphoprotein, host-virus interaction, protein-binding, golgi apparatus, alternative splicing
- 2vwf.pdb.
protein-binding 24-jun-08 2vwf
Title: grb2 sh3c (2)
Author: m. harkiolaki, t. tsirka, s. m. feller
Keywords: phosphoprotein, golgi apparatus, grb2, alternative splicing, host-virus interaction, sh3c, signaling, sh2 domain, sh3 domain, protein-binding
- 2w08.pdb.
glycoprotein 12-aug-08 2w08
Ca
Title: the structure of serum amyloid p component bound to 0- phospho-threonine
Author: s. e. kolstoe, m. b. pepys, s. p. wood
Keywords: polymorphism, metal-binding, tau, lectin, calcium, amyloid, secreted, alzheimers
- 2w0m.pdb.
unknown function 19-aug-08 2w0m
Zn
Title: crystal structure of sso2452 from sulfolobus solfataricus p2
Author: a. mcrobbie, l. carter, k. a. johnson, m. kerou, h. liu, s. mcmahon, m. oke, j. h. naismith, m. f. white
Keywords: reca, sulfolobus solfataricus p2, sspf, unknown function
- 2w10.pdb.
hydrolase 13-oct-08 2w10
Title: mona sh3c in complex
Author: m. harkiolaki, s. m. feller
Keywords: tpr repeat, sh2 domain, sh3 domain, coiled coil, protein phosphatase, cytoplasmic vesicle, phosphoprotein, signal tranduction, sh3 domain/complex, sh3, gads, mona, dimer, hd-ptp, hydrolase, cytoplasm
- 2w1q.pdb.
hydrolase 20-oct-08 2w1q
Na Ca
Title: unique ligand binding specificity for a family 32 carbohydrate-binding module from the mu toxin produced by clostridium perfringens
Author: e. ficko-blean, a. b. boraston
Keywords: glycosidase, glycoside hydrolase, clostridium perfringens, cbm, toxin, secreted, virulence, hydrolase
- 2w1s.pdb.
hydrolase 20-oct-08 2w1s
Na Ca Se
Title: unique ligand binding specificity of a family 32 carbohydrate-binding module from the mu toxin produced by clostridium perfringens
Author: e. ficko-blean, a. b. boraston
Keywords: clostridium perfringens, family 32 carbohydrate binding module, toxin, secreted, virulence, hydrolase, glycosidase, family 84 glycoside hydrolase
- 2w1u.pdb.
hydrolase 20-oct-08 2w1u
Ca
Title: a family 32 carbohydrate-binding module, from the mu toxin produced by clostridium perfringens, in complex with beta- d-glcnac-beta(1,3)galnac
Author: e. ficko-blean, a. b. boraston
Keywords: family 84 glycoside hydrolase, glycosidase, hexosaminidase, clostridium perfringens, cbm, toxin, secreted, virulence, hydrolase
- 2w5j.pdb.
hydrolase 10-dec-08 2w5j
Title: structure of the c14-rotor ring of the proton translocating chloroplast atp synthase
Author: m. vollmar, d. schlieper, m. winn, c. buechner, g. groth
Keywords: chloroplast, atp synthase, lipid-binding, cf(0), plastid, membrane, transport, formylation, energy transduction, hydrogen ion transport, ion transport, transmembrane, membrane protein
- 2w6m.pdb.
ligase 18-dec-08 2w6m
Cl Br
Title: crystal structure of biotin carboxylase from e. coli in complex with amino-oxazole fragment series
Author: i. mochalkin, j. r. miller
Keywords: biotin, inhibitor, atp-binding, fatty acid biosynthesis, biotin carboxylase, nucleotide-binding, lipid synthesis, atp-grasp domain, fragment screening
- 2w6n.pdb.
ligase 18-dec-08 2w6n
Cl
Title: crystal structure of biotin carboxylase from e. coli in complex with amino-oxazole fragment series
Author: i. mochalkin, j. r. miller
Keywords: biotin, inhibitor, atp-binding, fatty acid biosynthesis, biotin carboxylase, nucleotide-binding, lipid synthesis, atp-grasp domain, fragment screening
- 2w6o.pdb.
ligase 18-dec-08 2w6o
Cl
Title: crystal structure of biotin carboxylase from e. coli in complex with 4-amino-7,7-dimethyl-7,8-dihydro- quinazolinone fragment
Author: i. mochalkin, j. r. miller
Keywords: biotin, inhibitor, atp-binding, fatty acid biosynthesis, biotin carboxylase, nucleotide-binding, lipid synthesis, atp-grasp domain, fragment screening
- 2w6p.pdb.
ligase 18-dec-08 2w6p
Title: crystal structure of biotin carboxylase from e. coli in complex with 5-methyl-6-phenyl-quinazoline-2,4-diamine
Author: i. mochalkin, j. r. miller
Keywords: biotin, inhibitor, atp-binding, fatty acid biosynthesis, biotin carboxylase, nucleotide-binding, lipid synthesis, atp-grasp domain, fragment screening
- 2w6q.pdb.
ligase 18-dec-08 2w6q
Cl
Title: crystal structure of biotin carboxylase from e. coli in complex with the triazine-2,4-diamine fragment
Author: i. mochalkin, j. r. miller
Keywords: biotin, inhibitor, atp-binding, fatty acid biosynthesis, biotin carboxylase, nucleotide-binding, lipid synthesis, atp-grasp domain, fragment screening
- 2w6z.pdb.
ligase 19-dec-08 2w6z
Cl
Title: crystal structure of biotin carboxylase from e. coli in complex with the 3-(3-methyl-but-2-enyl)-3h-purin-6- ylamine fragment
Author: i. mochalkin, j. r. miller
Keywords: biotin, inhibitor, atp-binding, fatty acid biosynthesis, biotin carboxylase, nucleotide-binding, lipid synthesis, atp-grasp domain, fragment screening
- 2w70.pdb.
ligase 19-dec-08 2w70
Cl
Title: crystal structure of biotin carboxylase from e. coli in complex with the amino-thiazole-pyrimidine fragment
Author: i. mochalkin, j. r. miller
Keywords: biotin, inhibitor, atp-binding, fatty acid biosynthesis, biotin carboxylase, nucleotide-binding, lipid synthesis, atp-grasp domain, fragment screening
- 2w71.pdb.
ligase 19-dec-08 2w71
Cl
Title: crystal structure of biotin carboxylase from e. coli in complex with the imidazole-pyrimidine inhibitor
Author: i. mochalkin, j. r. miller
Keywords: biotin, inhibitor, atp-binding, fatty acid biosynthesis, biotin carboxylase, nucleotide-binding, lipid synthesis, atp-grasp domain, fragment screening
- 2waq.pdb.
transcription 11-feb-09 2waq
Mg Zn Fe
Title: the complete structure of the archaeal 13-subunit dna- directed rna polymerase
Author: y. korkhin, u. m. unligil, o. littlefield, p. j. nelson, d. i. stuart, p. b. sigler, s. d. bell, n. g. a. abrescia
Keywords: rna polymerase, transcription
- 2wb1.pdb.
transcription 19-feb-09 2wb1
Mg Zn Fe
Title: the complete structure of the archaeal 13-subunit dna- directed rna polymerase
Author: y. korkhin, u. m. unligil, o. littlefield, p. j. nelson, d. i. stuart, p. b. sigler, s. d. bell, n. g. a. abrescia
Keywords: multi-subunit enzyme, transcription
- 2wc2.pdb.
transcription regulator 06-mar-09 2wc2
He Hg
(solution NMR)
Title: nmr structure of catabolite activator protein in the unliganded state
Author: n. popovych, s. r. tzeng, c. g. kalodimos
Keywords: dna-binding protein, camp, activator, acetylation, dna-binding
- 2wcd.pdb.
toxin 11-mar-09 2wcd
Hg
Title: crystal structure of the assembled cytolysin a pore
Author: m. mueller, u. grauschopf, t. maier, r. glockshuber, n. ban
Keywords: pore-forming toxin, transmembrane pore, toxin, membrane, secreted, cytolysis, periplasm, hemolysis, transmembrane, disulfide bond
- 2wcy.pdb.
immune system 17-mar-09 2wcy
He Hg
(solution NMR)
Title: nmr solution structure of factor i-like modules of complement c7.
Author: m. m. phelan, c. t. thai, d. c. soares, r. t. ogata, p. n. barlow, j. bramham
Keywords: complement, complement pathway, membrane attack complex, innate immunity, egf-like domain, disease mutation
- 2wdb.pdb.
hydrolase 23-mar-09 2wdb
Ca
Title: a family 32 carbohydrate-binding module, from the mu toxin produced by clostridium perfringens, in complex with beta- d-glcnac-beta(1,2)mannose
Author: e. ficko-blean, a. b. boraston
Keywords: family 84 glycoside hydrolase, glycosidase, hexosaminidase, clostridium perfringens, cbm, toxin, secreted, virulence, hydrolase
- 2wdg.pdb.
ribosome 24-mar-09 2wdg
Mg Zn
Title: structure of the thermus thermophilus 70s ribosome in complex with mrna, paromomycin, acylated a-site trna, deacylated p-site trna, and e-site trna. this file contains the 30s subunit a-,p-, and e-site trnas and paromomycin for molecule i.
Author: r. m. voorhees, a. weixlbaumer, d. loakes, a. c. kelley, v. ramakrishnan
Keywords: ribosomal protein, ribonucleoprotein, translation, coiled coil, trna-binding, rrna-binding, trna, zinc, mrna, ribosome, rna-binding, zinc-finger
- 2wdh.pdb.
ribosome 24-mar-09 2wdh
Mg Zn
Title: structure of the thermus thermophilus 70s ribosome in complex with mrna, paromomycin, acylated a-site trna, deacylated p-site trna, and e-site trna. this file contains the 30s subunit a-,p-, and e-site trnas and paromomycin for molecule ii.
Author: r. m. voorhees, a. weixlbaumer, d. loakes, a. c. kelley, v. ramakrishnan
Keywords: ribosomal protein, ribonucleoprotein, translation, coiled coil, trna-binding, rrna-binding, trna, zinc, mrna, ribosome, rna-binding, zinc-finger
- 2wdi.pdb.
ribosome 24-mar-09 2wdi
Title: structure of the thermus thermophilus 70s ribosome in complex with mrna, paromomycin, acylated a-site trna, deacylated p-site trna, and e-site trna. this file contains the 50s subunit for molecule i.
Author: r. m. voorhees, a. weixlbaumer, d. loakes, a. c. kelley, v. ramakrishnan
Keywords: translation, paromomycin, trna-binding, trna, zinc, mrna, ribosome, repressor, rna-binding, ribonucleoprotein, translation regulation, rrna-binding, metal-binding, ribosomal protein
- 2wdj.pdb.
ribosome 24-mar-09 2wdj
Title: structure of the thermus thermophilus 70s ribosome in complex with mrna, paromomycin, acylated a-site trna, deacylated p-site trna, and e-site trna. this file contains the 50s subunit for molecule ii.
Author: r. m. voorhees, a. weixlbaumer, d. loakes, a. c. kelley, v. ramakrishnan
Keywords: zinc, mrna, ribosome, repressor, rna-binding, metal-binding, ribosomal protein, ribonucleoprotein, translation regulation, methylation, translation, trna-binding, rrna-binding
- 2wdk.pdb.
ribosome 24-mar-09 2wdk
Mg Zn
Title: structure of the thermus thermophilus 70s ribosome in complex with mrna, paromomycin, acylated a- and p-site trnas, and e-site trna. this file contains the 30s subunit a-,p-, and e-site trnas and paromomycin for molecule i.
Author: r. m. voorhees, a. weixlbaumer, d. loakes, a. c. kelley, v. ramakrishnan
Keywords: ribosomal protein, ribonucleoprotein, translation, coiled coil, trna-binding, rrna-binding, trna, zinc, mrna, ribosome, rna-binding, zinc-finger
- 2wdl.pdb.
ribosome 24-mar-09 2wdl
Title: structure of the thermus thermophilus 70s ribosome in complex with mrna, paromomycin, acylated a- and p-site trnas, and e-site trna. this file contains the 50s subunit for molecule i.
Author: r. m. voorhees, a. weixlbaumer, d. loakes, a. c. kelley, v. ramakrishnan
Keywords: translation, paromomycin, trna-binding, trna, zinc, mrna, ribosome, repressor, rna-binding, ribonucleoprotein, translation regulation, rrna-binding, metal-binding, ribosomal protein
- 2wdm.pdb.
ribosome 24-mar-09 2wdm
Mg Zn
Title: structure of the thermus thermophilus 70s ribosome in complex with mrna, paromomycin, acylated a- and p-site trnas, and e-site trna. this file contains the 30s subunit a-,p-, and e-site trnas and paromomycin for molecule ii.
Author: r. m. voorhees, a. weixlbaumer, d. loakes, a. c. kelley, v. ramakrishnan
Keywords: ribosomal protein, ribonucleoprotein, translation, coiled coil, trna-binding, rrna-binding, trna, zinc, mrna, ribosome, rna-binding, zinc-finger
- 2wdn.pdb.
ribosome 24-mar-09 2wdn
Title: structure of the thermus thermophilus 70s ribosome in complex with mrna, paromomycin, acylated a- and p-site trnas, and e-site trna. this file contains the 50s subunit for molecule ii.
Author: r. m. voorhees, a. weixlbaumer, d. loakes, a. c. kelley, v. ramakrishnan
Keywords: translation, paromomycin, trna-binding, trna, zinc, mrna, ribosome, repressor, rna-binding, ribonucleoprotein, translation regulation, rrna-binding, metal-binding, ribosomal protein
- 2wez.pdb.
hydrolase 02-apr-09 2wez
Title: human bace-1 in complex with 1-ethyl-n-((1s,2r)-2-hydroxy-3- (((3-(methyloxy)phenyl)methyl)amino)-1-(phenylmethyl) propyl)-4-(2-oxo-1-pyrrolidinyl)-1h-indole-6-carboxamide
Author: n. charrier, b. clarke, l. cutler, e. demont, c. dingwall, r. dunsdon, j. hawkins, c. howes, j. hubbard, i. hussain, g. maile, r. matico, j. mosley, a. naylor, a. o'brien, s. redshaw, p. rowland, v. soleil, k. j. smith, s. sweitzer, p. theobald, d. vesey, d. s. walter, g. wayne
Keywords: beta-site app cleaving enzyme
- 2wf0.pdb.
hydrolase 02-apr-09 2wf0
F
Title: human bace-1 in complex with 4-ethyl-n-((1s,2r)-2-hydroxy-1- (phenylmethyl)-3-(((3-(trifluoromethyl)phenyl)methyl)amino) propyl)-8-(2-oxo-1-pyrrolidinyl)-6-quinolinecarboxamide
Author: n. charrier, b. clarke, l. cutler, e. demont, c. dingwall, r. dunsdon, j. hawkins, c. howes, j. hubbard, i. hussain, g. maile, r. matico, j. mosley, a. naylor, a. o'brien, s. redshaw, p. rowland, v. soleil, k. j. smith, s. sweitzer, p. theobald, d. vesey, d. s. walter, g. wayne
Keywords: beta-site app cleaving enzyme
- 2wf1.pdb.
hydrolase 02-apr-09 2wf1
Title: human bace-1 in complex with 7-ethyl-n-((1s,2r)-2-hydroxy-3- (((3-(methyloxy)phenyl(methyl)amino)-1-(phenylmethyl) propyl)-1-methyl-3,4-dihydro-1h-(1,2,5)thiadiazepino(3,4,5- hi)indole-9-carboxamide 2,2-dioxide
Author: n. charrier, b. clarke, e. demont, c. dingwall, r. dunsdon, j. hawkins, j. hubbard, i. hussain, g. maile, r. matico, j. mosley, a. naylor, a. o'brien, s. redshaw, p. rowland, v. soleil, k. j. smith, s. sweitzer, p. theobald, d. vesey, d. s. walter, g. wayne
Keywords: beta-site app cleaving enzyme
- 2wf2.pdb.
hydrolase 02-apr-09 2wf2
Title: human bace-1 in complex with 8-ethyl-n-((1s,2r)-2-hydroxy-3- (((3-(methyloxy)phenyl)methyl)amino)-1-(phenylmethyl) propyl)-1-methyl-3,4,7,8-tetrahydro-1h,6h-(1,2,5) thiadiazepino(5,4,3-de)quinoxaline-10-carboxamide 2,2- dioxide
Author: n. charrier, b. clarke, e. demont, c. dingwall, r. dunsdon, j. hawkins, j. hubbard, i. hussain, g. maile, r. matico, j. mosley, a. naylor, a. o'brien, s. redshaw, p. rowland, v. soleil, k. j. smith, s. sweitzer, p. theobald, d. vesey, d. s. walter, g. wayne
Keywords: beta-site app cleaving enzyme
- 2wf3.pdb.
hydrolase 02-apr-09 2wf3
Title: human bace-1 in complex with 6-(ethylamino)-n-((1s,2r)-2- hydroxy-3-(((3-(methyloxy)phenyl)methyl)amino)-1-( phenylmethyl)propyl)-1-methyl-1,3,4,5-tetrahydro-2,1- benzothiazepine-8-carboxamide 2,2-dioxide
Author: n. charrier, b. clarke, e. demont, c. dingwall, r. dunsdon, j. hawkins, j. hubbard, i. hussain, g. maile, r. matico, j. mosley, a. naylor, a. o'brien, s. redshaw, p. rowland, v. soleil, k. j. smith, s. sweitzer, p. theobald, d. vesey, d. s. walter, g. wayne
Keywords: beta-site app cleaving enzyme
- 2wfd.pdb.
ligase 03-apr-09 2wfd
Se
Title: structure of the human cytosolic leucyl-trna synthetase editing domain
Author: e. seiradake, w. mao, v. hernandez, s. j. baker, j. j. plattner, m. r. k. alley, s. cusack
Keywords: phosphoprotein, editing domain, nucleotide-binding, hydrolysis of mis-charged trnas, protein biosynthesis, leucyl-trna synthetase, human, ligase, cytoplasm, atp-binding, polymorphism
- 2wfe.pdb.
ligase 04-apr-09 2wfe
Title: structure of the candida albicans cytosolic leucyl-trna synthetase editing domain
Author: e. seiradake, w. mao, v. hernandez, s. j. baker, j. j. plattner, m. r. k. alley, s. cusack
Keywords: leucyl-trna synthetase, editing domain, candida albicans, hydrolysis of mis-charged trnas
- 2wfg.pdb.
ligase 05-apr-09 2wfg
B F
Title: structure of the candida albicans cytosolic leucyl-trna synthetase editing domain bound to a benzoxaborole-amp adduct
Author: e. seiradake, w. mao, v. hernandez, s. j. baker, j. j. plattner, m. r. k. alley, s. cusack
Keywords: leucyl-trna synthetase, editing domain, candida albicans, hydrolysis of mis-charged trnas, benzoxaborole, anti-fungal
- 2wh1.pdb.
ribosome 30-apr-09 2wh1
Mg Zn
Title: insights into translational termination from the structure of rf2 bound to the ribosome
Author: a. weixlbaumer, h. jin, c. neubauer, r. m. voorhees, s. petry, a. c. kelley, v. ramakrishnan
Keywords: ribonucleoprotein, termination, rrna-binding, trna-binding, metal-binding, rf2, trna, zinc, mrna, ribosome, cytoplasm, protein biosynthesis, zinc-finger, rna-binding, translation, coiled coil
- 2wh2.pdb.
ribosome 30-apr-09 2wh2
Title: insights into translational termination from the structure of rf2 bound to the ribosome
Author: a. weixlbaumer, h. jin, c. neubauer, r. m. voorhees, s. petry, a. c. kelley, v. ramakrishnan
Keywords: trna, mrna, translation, termination, rf2
- 2wh3.pdb.
ribosome 30-apr-09 2wh3
Mg Zn
Title: insights into translational termination from the structure of rf2 bound to the ribosome). this file contains the 30s subunit.
Author: a. weixlbaumer, h. jin, c. neubauer, r. m. voorhees, s. petry, a. c. kelley, v. ramakrishnan
Keywords: ribonucleoprotein, trna-binding, rrna-binding, metal-binding, rf2, trna, zinc, mrna, ribosome, rna-binding, zinc-finger, translation, coiled coil, termination
- 2wh4.pdb.
ribosome 30-apr-09 2wh4
Title: insights into translational termination from the structure of rf2 bound to the ribosome
Author: a. weixlbaumer, h. jin, c. neubauer, r. m. voorhees, s. petry, a. c. kelley, v. ramakrishnan
Keywords: ribonucleoprotein, trna-binding, rrna-binding, metal-binding, translation regulation, rf2, trna, zinc, mrna, ribosome, repressor, rna-binding, methylation, translation, termination
- 2wid.pdb.
hydrolase 11-may-09 2wid
Cl Na
Title: nonaged form of human butyrylcholinesterase inhibited by tabun analogue ta1
Author: e. carletti, n. aurbek, e. gillon, m. loiodice, y. nicolet, j. fontecilla, p. masson, h. thiermann, f. nachon, f. worek
Keywords: aging, hydrolase, inhibition, polymorphism, glycoprotein, disulfide bond, serine esterase, disease mutation, butyrylcholinesterase
- 2wif.pdb.
hydrolase 11-may-09 2wif
Cl Na
Title: aged form of human butyrylcholinesterase inhibited by tabun analogue ta1
Author: e. carletti, n. aurbek, e. gillon, m. loiodice, y. nicolet, j. fontecilla, p. masson, h. thiermann, f. nachon, f. worek
Keywords: aging, hydrolase, inhibition, polymorphism, glycoprotein, disulfide bond, serine esterase, disease mutation, butyrylcholinesterase
- 2wig.pdb.
hydrolase 11-may-09 2wig
Cl Na
Title: nonaged form of human butyrylcholinesterase inhibited by tabun analogue ta4
Author: e. carletti, n. aurbek, e. gillon, m. loiodice, y. nicolet, j. fontecilla, p. masson, h. thiermann, f. nachon, f. worek
Keywords: aging, hydrolase, inhibition, polymorphism, glycoprotein, disulfide bond, serine esterase, disease mutation, butyrylcholinesterase
- 2wij.pdb.
hydrolase 12-may-09 2wij
Cl Na
Title: nonaged form of human butyrylcholinesterase inhibited by tabun analogue ta5
Author: e. carletti, n. aurbek, e. gillon, m. loiodice, y. nicolet, j. fontecilla, p. masson, h. thiermann, f. nachon, f. worek
Keywords: aging, hydrolase, inhibition, polymorphism, glycoprotein, disulfide bond, serine esterase, disease mutation, butyrylcholinesterase
- 2wik.pdb.
hydrolase 12-may-09 2wik
Cl Na
Title: nonaged form of human butyrylcholinesterase inhibited by tabun analogue ta6
Author: e. carletti, n. aurbek, e. gillon, m. loiodice, y. nicolet, j. fontecilla, p. masson, h. thiermann, f. nachon, f. worek
Keywords: aging, hydrolase, inhibition, polymorphism, glycoprotein, disulfide bond, serine esterase, disease mutation, butyrylcholinesterase
- 2wil.pdb.
hydrolase 12-may-09 2wil
Cl
Title: aged form of human butyrylcholinesterase inhibited by tabun analogue ta5
Author: e. carletti, n. aurbek, e. gillon, m. loiodice, y. nicolet, j. fontecilla, p. masson, h. thiermann, f. nachon, f. worek
Keywords: aging, hydrolase, inhibition, polymorphism, glycoprotein, disulfide bond, serine esterase, disease mutation, butyrylcholinesterase
- 2yfp.pdb.
photosynthesis 17-aug-98 2yfp
Title: structure of yellow-emission variant of gfp
Author: r. m. wachter, m. a. elsliger, k. kallio, g. t. hanson, s. j. remington
Keywords: yellow-emission variant, bioluminescence, photoactive protein, fluorescent tag, photosynthesis
- 2zit.pdb.
biosynthetic protein/transferase 24-feb-08 2zit
Title: structure of the eef2-exoa-nad+ complex
Author: r. jorgensen, a. r. merrill
Keywords: biosynthetic protein/transferase complex
- 2zxe.pdb.
hydrolase/transport protein 22-dec-08 2zxe
Mg F K
Title: crystal structure of the sodium - potassium pump in the e2.2k+.pi state
Author: t. shinoda, h. ogawa, f. cornelius, c. toyoshima
Keywords: ion pump, atpase, k+ binding, haloacid dehydrogenease superfamily, phosphate analogue, atp-binding, hydrolase, ion transport, nucleotide-binding, phosphoprotein, hydrolase/transport protein complex
- 2zxh.pdb.
fad-binding protein 24-dec-08 2zxh
Title: structure of aquifex aeolicus gida in the form i crystal
Author: t. numata, t. osawa
Keywords: modification, trna, wobble uridine, fad, fad-binding protein, trna modification enzyme
- 2zxi.pdb.
fad-binding protein 24-dec-08 2zxi
Title: structure of aquifex aeolicus gida in the form ii crystal
Author: t. numata, t. osawa
Keywords: trna, 5-carboxymethylaminomethyl uridine, wobble uridine, fad, fad-binding protein, trna modification enzyme
- 3a20.pdb.
electron transport 27-apr-09 3a20
Title: l122k mutant of fmn-binding protein from desulfovibrio vulgaris (miyazaki f)
Author: n. shibata, y. higuchi
Keywords: cytoplasm, electron transport, flavoprotein, fmn, transport
- 3b43.pdb.
structural protein 23-oct-07 3b43
Title: i-band fragment i65-i70 from titin
Author: e. von castelmur, m. marino, d. labeit, s. labeit, o. mayans
Keywords: extended poly-ig filament, titin, elastic filament, structural protein
- 3b5n.pdb.
membrane protein 26-oct-07 3b5n
Title: structure of the yeast plasma membrane snare complex
Author: p. strop, a. t. brunger
Keywords: membrane protein
- 3b9b.pdb.
hydrolase 04-nov-07 3b9b
Mg F Be Na
Title: structure of the e2 beryllium fluoride complex of the serca ca2+-atpase
Author: c. olesen, m. picard, a. m. l. winther, j. p. morth, j. v. moller, p. nissen
Keywords: nucleotide-binding, phosphorylation, sarcoplasmic reticulum, transmembrane, transport
- 3b9r.pdb.
hydrolase 06-nov-07 3b9r
Mg F K Al
Title: serca ca2+-atpase e2 aluminium fluoride complex without thapsigargin
Author: c. olesen, m. picard, a. m. l. winther, j. p. morth, j. v. moller, p. nissen
Keywords: metal-binding, nucleotide-binding, phosphorylation, sarcoplasmic reticulum, transmembrane, transport
- 3bgf.pdb.
viral protein/immune system 26-nov-07 3bgf
Title: x-ray crystal structure of the sars coronavirus spike receptor binding domain in complex with f26g19 fab
Author: j. e. pak, j. m. rini
Keywords: envelope protein, glycoprotein, host-virus interaction, membrane, transmembrane, virion, virulence, viral protein/immune system complex
- 3blh.pdb.
transcription 11-dec-07 3blh
Title: crystal structure of human cdk9/cyclint1
Author: s. baumli, g. lolli, e. d. lowe, l. n. johnson
Keywords: acetylation, cell cycle, cell division, coiled coil, host-virus interaction
- 3blq.pdb.
transcription 11-dec-07 3blq
Mg
Title: crystal structure of human cdk9/cyclint1 in complex with atp
Author: s. baumli, g. lolli, e. d. lowe, l. n. johnson
Keywords: transferase, acetylation, cell cycle, cell division, coiled coil, host-virus interaction
- 3blr.pdb.
transcription 11-dec-07 3blr
Cl
Title: crystal structure of human cdk9/cyclint1 in complex with flavopiridol
Author: s. baumli, g. lolli, e. d. lowe, l. n. johnson
Keywords: transferase, acetylation, cell cycle, cell division, coiled coil, host-virus interaction
- 3bo6.pdb.
lyase 17-dec-07 3bo6
Title: structure of the chromobacterium violaceum vira (spvc) phosphothreonine lyase effector protein
Author: d. f. brennan, s. m. roe, d. barford
- 3bxd.pdb.
oxidoreductase 13-jan-08 3bxd
He Hg Fe
Title: crystal structure of mouse myo-inositol oxygenase (re- refined)
Author: b. m. hallberg
Keywords: hd domain fold, diiron, oxidoreductase
- 3c1q.pdb.
transport protein 24-jan-08 3c1q
Cl Na Ca Se
Title: the three-dimensional structure of the cytoplasmic domains of epsf from the type 2 secretion system of vibrio cholerae
Author: j. abendroth, d. d. mitchell, k. v. korotkov, a. kreeger, w. g. j. hol
Keywords: t2ss, t4pb, cholera, inner membrane, membrane, transmembrane, transport protein
- 3c8d.pdb.
hydrolase 11-feb-08 3c8d
Title: crystal structure of the enterobactin esterase irod from shigella flexneri in the presence of 2,3-di-hydroxy-n- benzoyl-glycine
Author: y. kim, n. maltseva, r. abergel, d. holzle, k. raymond, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: irod, iron aquisition, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, hydrolase
- 3c8h.pdb.
hydrolase 12-feb-08 3c8h
Se
Title: crystal structure of the enterobactin esterase irod from shigella flexneri in the presence of 2,3-di-hydroxy-n- benzoyl-serine
Author: y. kim, n. maltseva, r. abergel, d. holzle, k. raymond, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: irod, iron aquisition, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, hydrolase
- 3c8p.pdb.
toxin 13-feb-08 3c8p
Title: x-ray structure of viscotoxin a1 from viscum album l.
Author: a. pal, j. e. debreczeni, m. sevvana, t. gruene, b. kahle, a. zeeck, g. m. sheldrick
Keywords: toxin
- 3c98.pdb.
endocytosis/exocytosis 15-feb-08 3c98
Title: revised structure of the munc18a-syntaxin1 complex
Author: d. a. hattendorf, k. m. misura, p. burkhardt, r. h. scheller, d. fasshauer, w. i. weis
Keywords: alternative splicing, cytoplasm, membrane, phosphoprotein, protein transport, transport, coiled coil, neurotransmitter transport, transmembrane, endocytosis/exocytosis complex
- 3cdg.pdb.
immune system 26-feb-08 3cdg
Title: human cd94/nkg2a in complex with hla-e
Author: e. j. petrie, c. s. clements, j. lin, l. c. sullivan, d. johnson, t. huyton, a. heroux, h. l. hoare, t. beddoe, h. h. reid, m. c. j. wilce, a. g. brooks, j. rossjohn
Keywords: alternative splicing, signal-anchor, immune system
- 3crb.pdb.
hydrolase 05-apr-08 3crb
Zn Fe
Title: crystal structure of the complex of c-lobe of lactoferrin with 2-chromenone at 2.6 a resolution
Author: g. vikram, r. mir, m. sinha, n. singh, p. kaur, s. sharma, t. p. singh
Keywords: complex, coumarin, 2-chromenone, c-lobe, hydrolase
- 3cry.pdb.
transferase 08-apr-08 3cry
Title: gamma-glutamyl cyclotransferase
Author: a. j. oakley, p. g. board
Keywords: cyclotransferase, gamma-glutamyl, oxoproline
- 3csk.pdb.
hydrolase 10-apr-08 3csk
Mg Zn
Title: structure of dpp iii from saccharomyces cerevisiae
Author: p. k. baral, n. jajcanin, s. deller, p. macheroux, m. abramic, k. gruber
Keywords: aminodipeptidase, hexxgh-motif, aminopeptidase, cytoplasm, hydrolase, metal-binding, metalloprotease, protease, zinc
- 3d28.pdb.
transferase 07-may-08 3d28
Title: crystal structure of hcv ns5b polymerase with a novel benzisothiazole inhibitor
Author: q. han, r. e. showalter, q. zhao, c. r. kissinger
Keywords: rna-directed rna polymerase, nucleotidyltransferase, nucleotide-binding, transcription, hydrolase, transferase
- 3d3p.pdb.
hydrolase 12-may-08 3d3p
Mg Zn As
Title: crystal structure of pde4b catalytic domain in complex with a pyrazolopyridine inhibitor
Author: d. o. somers, m. neu
Keywords: phosphodiesterase, camp, alternative splicing, hydrolase, phosphoprotein, polymorphism
- 3d4x.pdb.
oxygen storage, oxygen transport 15-may-08 3d4x
Fe
Title: crystal structure determination of cat (felis silvestris catus) hemoglobin at 2.2 angstrom resolution
Author: m. balasubramanian, pon. sathya moorthy, k. neelagandan, m. n. ponnuswamy
Keywords: monoclinic, hemoglobin, low oxygen affinity, allosteric mechanism, heme, iron, transport, polymorphism, oxygen storage, oxygen transport
- 3d5m.pdb.
transferase 16-may-08 3d5m
Cl F
Title: crystal structure of hcv ns5b polymerase with a novel pyridazinone inhibitor
Author: q. zhao, r. e. showalter, q. han, c. r. kissinger
Keywords: rna polymerase, rna replication, rna-binding, transcription, nucleotidyltransferase, hydrolase
- 3d6e.pdb.
hydrolase 19-may-08 3d6e
Ca
Title: crystal structure of the engineered 1,3-1,4-beta-glucanase protein from bacillus licheniformis
Author: i. fita, a. planas, b. m. calisto, t. addington
Keywords: calcium binding motif, crystal structure, protein engineering, glycosidase, hydrolase
- 3da9.pdb.
hydrolase 29-may-08 3da9
Na
Title: crystal structure of thrombin in complex with inhibitor
Author: y. xue, s. k. hansson
Keywords: polymorphism, protease, secreted, serine protease, zymogen
- 3dat.pdb.
oxidoreductase 30-may-08 3dat
Title: crystal structure of the ternary mtx nadph complex of bacillus anthracis dihydrofolate reductase
Author: b. c. bennett, c. g. dealwis
Keywords: oxidoreductase, pseudo-rossmann fold, adenine nucleotide binding domain
- 3dau.pdb.
oxidoreductase 30-may-08 3dau
Title: crystal structure of the ternary mtx nadph complex of escherichia coli dihydrofolate reductase
Author: b. c. bennett, c. g. dealwis
Keywords: pseudo-rossmann fold, adenine nucleotide binding domain, antibiotic resistance, methotrexate resistance, nadp, one-carbon metabolism, trimethoprim resistance
- 3dhk.pdb.
blood clotting/hydrolase inhibitor 18-jun-08 3dhk
Cl Na
Title: bisphenylic thrombin inhibitors
Author: b. baum, a. heine, g. klebe
Keywords: secreted, serine protease, zymogen
- 3dj4.pdb.
transferase 22-jun-08 3dj4
Co Mg
Title: crystal structure of glmu from mycobacterium tuberculosis in complex with uridine-diphosphate-n-acetylglucosamine.
Author: s. k. verma, b. prakash
Keywords: nucleotidyltransferase, peptidoglycan synthesis, transferase, acyltransferase
- 3dk5.pdb.
transferase 24-jun-08 3dk5
Mg
Title: crystal structure of apo-glmu from mycobacterium tuberculosis
Author: s. k. verma, b. prakash
Keywords: nucleotidyltransferase, peptidoglycan synthesis, transferase
- 3dkw.pdb.
transcription regulator 26-jun-08 3dkw
Title: crystal structure of dnr from pseudomonas aeruginosa.
Author: g. giardina
Keywords: hth, beta barrel, dimerization helix, homodimer, transcription regulator
- 3dsg.pdb.
unknown function 12-jul-08 3dsg
Se
Title: xc1028 from xanthomonas campestris adopts a pilz domain- like structure yet with trivial c-di-gmp binding activity
Author: t. n. li, k. h. chin, j. h. liu, a. h. j. wang, s. h. chou
Keywords: xanthomonas campestris, c-di-gmp, type iv pilus, pa2960, unknown function
- 3dsz.pdb.
transport protein 14-jul-08 3dsz
Y
Title: engineered human lipocalin 2 in complex with y-dtpa
Author: a. eichinger, a. skerra
Keywords: ligand binding protein, beta barrel, engineered lipocalin, de novo protein, protein binding, transport protein
- 3dxx.pdb.
transferase 25-jul-08 3dxx
Title: crystal structure of ectrmb
Author: h. h. zhou, q. liu, y. x. gao, m. k. teng, l. w. niu
Keywords: trna modification, methyltransferase, s-adenosyl-l-methionine, transferase, trna processing
- 3dxy.pdb.
transferase 25-jul-08 3dxy
Title: crystal structure of ectrmb in complex with sam
Author: h. h. zhou, q. liu, y. x. gao, m. k. teng, l. w. niu
Keywords: trna modification, methyltransferase, s-adenosyl-l-methionine, transferase, trna processing
- 3dxz.pdb.
transferase 25-jul-08 3dxz
Title: crystal structure of ectrmb in complex with sah
Author: h. h. zhou, q. liu, y. x. gao, m. k. teng, l. w. niu
Keywords: trna modification, methyltransferase, s-adenosyl-l-methionine, transferase, trna processing
- 3e1y.pdb.
translation 05-aug-08 3e1y
Title: crystal structure of human erf1/erf3 complex
Author: z. cheng, m. lim, c. kong, h. song
Keywords: erf1, erf3, peptide release, ptc, acetylation, cytoplasm, protein biosynthesis, gtp-binding, nucleotide-binding
- 3e20.pdb.
translation 05-aug-08 3e20
Title: crystal structure of s.pombe erf1/erf3 complex
Author: z. cheng, m. lim, c. kong, h. song
Keywords: sup45, translation termination, peptide release, cytoplasm, gtp-binding, nucleotide-binding, phosphoprotein, protein biosynthesis
- 3e4a.pdb.
hydrolase 11-aug-08 3e4a
Zn
Title: human ide-inhibitor complex at 2.6 resolution
Author: e. malito, w. j. tang
Keywords: x-ray crystallography, hydroxamate, insulin degrading enzyme, cytoplasm, hydrolase, metal-binding, metalloprotease, protease, zinc
- 3ebn.pdb.
hydrolase 28-aug-08 3ebn
Title: a special dimerization of sars-cov main protease c-terminal domain due to domain-swapping
Author: n. zhong, s. zhang, f. xue, x. kang, z. lou, b. xia
Keywords: coronavirus, main protease, crystal structure, dimerization, n-finger, c-terminal domain, hydrolase
- 3ecu.pdb.
oxidoreductase 02-sep-08 3ecu
Title: crystal structure of human apo cu,zn superoxide dismutase (sod1)
Author: v. calderone
Keywords: ubl conjugation, zinc
- 3ecv.pdb.
oxidoreductase 02-sep-08 3ecv
Title: crystal structure of the als-related pathological mutant i113t of human apo cu,zn superoxide dismutase (sod1)
Author: v. calderone
Keywords: oxidoreductase, ubl conjugation, zinc
- 3ecw.pdb.
oxidoreductase 02-sep-08 3ecw
Title: crystal structure of the als-related pathological mutant t54r of human apo cu,zn superoxide dismutase (sod1)
Author: v. calderone
Keywords: oxidoreductase, ubl conjugation, zinc
- 3eff.pdb.
membrane protein 08-sep-08 3eff
Title: the crystal structure of full-length kcsa in its closed conformation
Author: s. uysal, v. vasquez, t. tereshko, k. esaki, f. a. fellouse, s. s. sidhu, s. koide, e. perozo, a. kossiakoff
Keywords: bulge helix, cell membrane, ion transport, ionic channel, membrane, transmembrane, transport, voltage- gated channel, membrane protein
- 3ehx.pdb.
hydrolase 15-sep-08 3ehx
Zn Ca
Title: crystal structure of the catalytic domain of human mmp12 complexed with the inhibitor (r)-2-(biphenyl-4- ylsulfonamido)-4-methylpentanoic acid
Author: v. calderone
Keywords: zymogen
- 3ehy.pdb.
hydrolase 15-sep-08 3ehy
Zn Ca
Title: crystal structure of the catalytic domain of human mmp12 complexed with the inhibitor (r)-2-(4- methoxyphenylsulfonamido)propanoic acid
Author: v. calderone
Keywords: zymogen
- 3en3.pdb.
membrane protein 25-sep-08 3en3
Title: crystal structure of the glur4 ligand-binding domain in complex with kainate
Author: a. gill, d. r. madden
Keywords: ampa receptor, ligand-gated ion channel, ligand- binding domain, kainate, alternative splicing, cell junction, cell membrane, glycoprotein, ion transport, ionic channel, lipoprotein, membrane protein
- 3epe.pdb.
membrane protein 29-sep-08 3epe
Title: crystal structure of the glur4 ligand-binding domain in complex with glutamate
Author: a. gill, d. r. madden
Keywords: ampa receptor, ligand-gated ion channel, ligand- binding domain, kainate, alternative splicing, cell junction, cell membrane, glycoprotein, ion transport, ionic channel, lipoprotein, membrane protein
- 3eto.pdb.
signaling protein 08-oct-08 3eto
Cl Ca
Title: 2 angstrom xray structure of the notch1 negative regulatory region (nrr)
Author: w. r. gordon, s. c. blacklow
Keywords: metal-binding, notch signaling pathway, nucleus, phosphoprotein, polymorphism, receptor, transcription, transcription regulation, transmembrane, signaling protein
- 3exx.pdb.
hormone 17-oct-08 3exx
Na Ni
Title: structure of the t6 human insulin derivative with nickel at 1.35 a resolution
Author: b. prugovecki, d. matkovic-calogovic
Keywords: carbohydrate metabolism, cleavage on pair of basic residues, diabetes mellitus, disease mutation, glucose metabolism, hormone, pharmaceutical, secreted
- 3f4n.pdb.
biosynthetic protein, transferase 01-nov-08 3f4n
Title: crystal structure of pyridoxal phosphate biosynthetic protein pdxj from yersinia pestis
Author: y. kim, n. maltseva, j. stam, w. f. anderson, a. joachimiak, center for structural genomics of infectious diseases (csgid)
Keywords: center for structural genomics of infectious diseases, nppsfa, national project on protein structural and functional analyses
- 3f65.pdb.
chaperone 05-nov-08 3f65
Title: the f4 fimbrial chaperone faee does not self-cap its interactive surfaces
Author: i. van molle, k. moonens, l. buts, a. garcia-pino, l. wyns, h. de greve, j. bouckaert
Keywords: cell projection, chaperone, fimbrium, immunoglobulin domain, periplasm, plasmid
- 3f6i.pdb.
chaperone 06-nov-08 3f6i
Se
Title: structure of the semet labeled f4 fibrial chaperone faee
Author: i. van molle, k. moonens, l. buts, a. garcia-pino, l. wyns, h. de greve, j. bouckaert
Keywords: cell projection, chaperone, fimbrium, immunoglobulin domain, periplasm, plasmid
- 3f6l.pdb.
chaperone 06-nov-08 3f6l
Title: structure of the f4 fimbrial chaperone faee
Author: i. van molle, k. moonens, l. buts, a. garcia-pino, l. wyns, h. de greve, j. bouckaert
Keywords: cell projection, chaperone, fimbrium, immunoglobulin domain, periplasm, plasmid
- 3ff6.pdb.
ligase 02-dec-08 3ff6
Title: human acc2 ct domain with cp-640186
Author: s. p. williams, k. p. madauss, w. a. burkhart
Keywords: multifunctional enzyme, nucleotide-binding, phosphoprotein, polymorphism
- 3fgs.pdb.
metal transport 08-dec-08 3fgs
Fe
Title: crystal structure of g65r/k206e double mutant of the n-lobe human transferrin
Author: p. j. halbrooks, a. b. mason, s. j. everse
Keywords: iron binding protein, dilysine pair, disease mutation, glycoprotein, ion transport, iron, iron transport, metal-binding, methylation, phosphoprotein, polymorphism, secreted, transport, metal transpor...
- 3fhf.pdb.
dna repair, hydrolase, lyase 09-dec-08 3fhf
Se
Title: crystal structure of methanocaldococcus jannaschii 8- oxoguanine dna glycosylase (mjogg)
Author: f. faucher, s. doublie
Keywords: helix-hairpin-helix, glycosylase, 8-oxoguanine, 8-oxog, mjogg, dna damage, dna repair, glycosidase, hydrolase, lyase, multifunctional enzyme, nuclease
- 3fhg.pdb.
dna repair, hydrolase, lyase 09-dec-08 3fhg
Title: crystal structure of sulfolobus solfataricus 8-oxoguanine dna glycosylase (ssogg)
Author: f. faucher, s. doublie
Keywords: helix-hairpin-helix, glycosylase, 8-oxoguanine, 8-oxog, ssogg, dna damage, dna repair, glycosidase, hydrolase, lyase, multifunctional enzyme, nuclease
- 3fiq.pdb.
transport protein 12-dec-08 3fiq
He Hg
Title: odorant binding protein obp1
Author: s. a. white
Keywords: oderant-binding protein, transport protein
- 3fjt.pdb.
immune system 15-dec-08 3fjt
Title: crystal structure of a human fc fragment engineered for extended serum half-life
Author: v. oganesyan, h. wu, w. f. dall'acqua
Keywords: igg1, fcrn binding, ch3-ch3 association, chromosomal rearrangement, glycoprotein, immunoglobulin c region, immunoglobulin domain, secreted, immune system
- 3fl7.pdb.
transferase, signaling protein 18-dec-08 3fl7
Cl Na
Title: crystal structure of the human ephrin a2 ectodomain
Author: j. r. walker, l. yermekbayeva, a. seitova, c. butler-cole, c. bountra, j. weigelt, c. h. arrowsmith, a. m. edwards, a. bochkarev, s. dhe- paganon, structural genomics consortium (sgc)
Keywords: egf-like motif, fibronectin domain, structural genomics consortium, sgc, membrane, phosphoprotein, signaling protein
- 3fmo.pdb.
oncoprotein/hydrolase 22-dec-08 3fmo
Title: crystal structure of the nucleoporin nup214 in complex with the dead-box helicase ddx19
Author: j. napetschnig, e. w. debler, g. blobel, a. hoelz
Keywords: protein transport/hydrolase complex, oncoprotein/hydrolase complex
- 3fmp.pdb.
oncoprotein/hydrolase 22-dec-08 3fmp
Title: crystal structure of the nucleoporin nup214 in complex with the dead-box helicase ddx19
Author: j. napetschnig, e. w. debler, g. blobel, a. hoelz
Keywords: protein transport/hydrolase complex, oncoprotein/hydrolase complex
- 3fnm.pdb.
transferase 25-dec-08 3fnm
Title: crystal structure of acivicin-inhibited gamma- glutamyltranspeptidase reveals critical roles for its c- terminus in autoprocessing and catalysis
Author: k. williams, s. cullati, a. sand, e. i. biterova, j. j. barycki
Keywords: glutamyltranspeptidase, transferase
- 3fod.pdb.
protein fibril 29-dec-08 3fod
Title: ailsst segment from islet amyloid polypeptide
Author: j. j. w. wiltzius, m. r. sawaya, k. rajashankar, d. eisenberg
Keywords: protein fibril
- 3fpn.pdb.
dna binding protein 05-jan-09 3fpn
Title: crystal structure of uvra-uvrb interaction domains
Author: d. pakotiprapha, g. l. verdine, d. jeruzalmi
Keywords: uvrb, nucleotide excision repair, dna repair, dna binding protein
- 3fsi.pdb.
transferase/dna 09-jan-09 3fsi
Title: crystal structure of a trypanocidal 4,4'- bis(imidazolinylamino)diphenylamine bound to dna
Author: l. s. glass, m. m. georgiadis, k. d. goodwin
Keywords: protein-dna complex, drug-dna complex, cd27, antitrypanosomal, dna integration, dna recombination, nucleotidyltransferase, transferase
- 3fv3.pdb.
hydrolase 15-jan-09 3fv3
Title: secreted aspartic protease 1 from candida parapsilosis in complex with pepstatin a
Author: j. dostal, j. brynda, o. hruskova-heidingsfeldova, i. sieglova, i. pichova, p. rezacova
Keywords: secreted aspartic protease, virulence factor, hydrolase
- 3fvs.pdb.
lyase, transferase 16-jan-09 3fvs
Na
Title: human kynurenine aminotransferase i in complex with glycerol
Author: q. han, h. robinson, t. cai, d. a. tagle, j. li
Keywords: plp dependent protein, aminotransferase, lyase, pyridoxal phosphate, transferase, alternative splicing, cytoplasm
- 3fvu.pdb.
lyase, transferase 16-jan-09 3fvu
Na
Title: crystal structure of human kynurenine aminotransferase i in complex with indole-3-acetic acid
Author: q. han, h. robinson, t. cai, d. a. tagle, j. li
Keywords: plp dependent protein, aminotransferase, lyase, pyridoxal phosphate,transferase, alternative splicing, cytoplasm, transferase
- 3fvx.pdb.
transferase, lyase 16-jan-09 3fvx
Na
Title: human kynurenine aminotransferase i in complex with tris
Author: q. han, h. robinson, t. cai, d. a. tagle, j. li
Keywords: alternative splicing, aminotransferase, cytoplasm, lyase, pyridoxal phosphate, transferase
- 3fw7.pdb.
flavoprotein 17-jan-09 3fw7
Mg
Title: structure of berberine bridge enzyme, h104a variant
Author: a. winkler, p. macheroux, k. gruber
Keywords: n-glycosylation, alakloid biosynthesis, oxidoreductase, alkaloid metabolism, cytoplasmic vesicle, fad, flavoprotein, glycoprotein
- 3fw8.pdb.
flavoprotein 17-jan-09 3fw8
Mg
Title: structure of berberine bridge enzyme, c166a variant
Author: a. winkler, p. macheroux, k. gruber
Keywords: n-glycosylation, alakloid biosynthesis, oxidoreductase, alkaloid metabolism, cytoplasmic vesicle, fad, flavoprotein, glycoprotein
- 3fw9.pdb.
flavoprotein 17-jan-09 3fw9
Mg
Title: structure of berberine bridge enzyme in complex with (s)- scoulerine
Author: a. winkler, p. macheroux, k. gruber
Keywords: n-glycosylation, alakloid biosynthesis, oxidoreductase, alkaloid metabolism, cytoplasmic vesicle, fad, flavoprotein, glycoprotein
- 3fwa.pdb.
flavoprotein 17-jan-09 3fwa
Mg
Title: structure of berberine bridge enzyme, c166a variant in complex with (s)-reticuline
Author: a. winkler, p. macheroux, k. gruber
Keywords: n-glycosylation, alakloid biosynthesis, oxidoreductase, alkaloid metabolism, cytoplasmic vesicle, fad, flavoprotein, glycoprotein
- 3fy4.pdb.
lyase 21-jan-09 3fy4
Title: (6-4) photolyase crystal structure
Author: k. hitomi, a. s. arvai, j. a. tainer, e. d. getzoff
Keywords: dna repair, clock cryptochrome, lyase
- 3g42.pdb.
hydrolase 03-feb-09 3g42
Zn
Title: crystal structure of tace with tryptophan sulfonamide derivative inhibitor
Author: w. xu, park k. , a. gopalsamy, a. aplasca, y. h. zhang, j. i. levin
Keywords: phosphoprotein, polymorphism, protease, sh3-binding, transmembrane, zinc, zymogen
- 3g5q.pdb.
transferase 05-feb-09 3g5q
Title: crystal structure of thermus thermophilus trmfo
Author: h. nishimasu, r. ishitani, h. hori, o. nureki
Keywords: cytoplasm, fad, flavoprotein, methyltransferase, transferase, trna processing
- 3g5r.pdb.
transferase 05-feb-09 3g5r
Ca
Title: crystal structure of thermus thermophilus trmfo in complex with tetrahydrofolate
Author: h. nishimasu, r. ishitani, h. hori, o. nureki
Keywords: cytoplasm, fad, flavoprotein, methyltransferase, transferase, trna processing
- 3g5s.pdb.
transferase 05-feb-09 3g5s
Mg Se
Title: crystal structure of thermus thermophilus trmfo in complex with glutathione
Author: h. nishimasu, r. ishitani, h. hori, o. nureki
Keywords: cytoplasm, fad, flavoprotein, methyltransferase, transferase, trna processing
- 3g73.pdb.
transcription/dna 09-feb-09 3g73
Mg
Title: structure of the foxm1 dna binding
Author: d. r. littler, a. perrakis, r. g. hibbert, r. h. medema
Keywords: transcription
- 3g90.pdb.
transferase 12-feb-09 3g90
F
Title: jnk-3 bound to (z)-5-fluoro-1-((6-fluoro-4h-benzo[d][1, 3]dioxin-8-yl)methyl)-3-(hydroxyimino)indolin-2-one
Author: x. xie, m. d. jacobs
Keywords: inhibitor, phosphorylation, alternative splicing, atp-binding, chromosomal rearrangement, cytoplasm, epilepsy, nucleotide-binding, phosphoprotein, serine/threonine- protein kinase, transferase
- 3g9l.pdb.
transferase 13-feb-09 3g9l
F
Title: jnk3 bound to (z)-1-((6-fluoro-4h-benzo[d][1,3]dioxin-8-yl) methyl)-3-(hydroxyimino)-4-styrylindolin-2-one
Author: m. d. jacobs
Keywords: inhibitor, phosphorylation, alternative splicing, atp-binding, chromosomal rearrangement, cytoplasm, epilepsy, nucleotide-binding, phosphoprotein, serine/threonine- protein kinase, transferase
- 3g9n.pdb.
transferase 13-feb-09 3g9n
F
Title: jnk3 bound to (z)-1-((6-fluoro-4h-benzo[d][1,3]dioxin-8-yl) methyl)-3-(hydroxyimino)-4-phenylindolin-2-one
Author: m. d. jacobs
Keywords: inhibitor, phosphorylation, alternative splicing, atp-binding, chromosomal rearrangement, cytoplasm, epilepsy, nucleotide-binding, phosphoprotein, serine/threonine- protein kinase, transferase
- 3ga1.pdb.
transcription 16-feb-09 3ga1
Title: crystal structure of the human nac1 poz domain
Author: m. a. stead, s. b. carr, s. c. wright
Keywords: cytoplasm, nucleus, phosphoprotein, repressor, transcription, transcription regulation
- 3gb8.pdb.
transport protein 19-feb-09 3gb8
Title: crystal structure of crm1/snurportin-1 complex
Author: x. dong, a. biswas, k. e. suel, l. k. jackson, r. martinez, h. gu, y. m. chook
Keywords: cytoplasm, host-virus interaction, mrna transport, nucleus, phosphoprotein, protein transport, rna-binding, transport, transport protein
- 3gb9.pdb.
transferase 19-feb-09 3gb9
F
Title: human purine nucleoside phosphorylase double mutant e201q, n243d complexed with 2-fluoroadenine
Author: m. r. sawaya, s. afshar
Keywords: acetylation, disease mutation, glycosyltransferase, polymorphism, transferase
- 3gbj.pdb.
motor protein 19-feb-09 3gbj
Mg
Title: crystal structure of the motor domain of kinesin kif13b bound with adp
Author: y. tong, l. shen, y. shen, w. tempel, c. h. arrowsmith, a. m. edwards, c. bountra, j. weigelt, a. bochkarev, h. park, structural genomics consortium (sgc)
Keywords: motor domain, adp, structural genomics, structural genomics consortium, sgc, atp-binding, microtubule, motor protein, nucleotide-binding
- 3gbw.pdb.
ligase 20-feb-09 3gbw
Se
Title: crystal structure of the first phr domain of the mouse myc- binding protein 2 (mycbp-2)
Author: p. sampathkumar, s. ozyurt, s. wasserman, r. l. klemke, s. miller, k. bain, m. rutter, g. tarun, s. atwell, j. m. sauder, s. k. burley, new york sgx research center for structural genomics (nysgxrc)
Keywords: zinc-finger, new york sgx research center for structural genomics
- 3gct.pdb.
hydrolase (serine proteinase) 04-sep-90 3gct
Title: structure of gamma-*chymotrypsin in the range $p*h 2.0 to $p*h 10.5 suggests that gamma-chymotrypsin is a covalent acyl-enzyme adduct at low $p*h
Author: m. m. dixon, b. w. matthews
- 3gd3.pdb.
oxidoreductase 23-feb-09 3gd3
Title: crystal structure of a naturally folded murine apoptosis inducing factor
Author: i. f. sevrioukova
Keywords: acetylation, apoptosis, dna-binding, fad, flavoprotein, mitochondrion, nucleus, oxidoreductase, phosphoprotein, transit peptide
- 3gd4.pdb.
oxidoreductase 23-feb-09 3gd4
Title: crystal structure of the reduced, nad-bound form of murine apoptosis inducing factor
Author: i. f. sevrioukova
Keywords: acetylation, apoptosis, dna-binding, fad, flavoprotein, mitochondrion, nucleus, oxidoreductase, phosphoprotein, transit peptide
- 3gdi.pdb.
transcription 24-feb-09 3gdi
Title: mammalian clock protein mper2 - crystal struture of a pas domain fragment
Author: s. hennig, e. wolf
Keywords: biological rhythms, cytoplasm, nucleus, phosphoprotein, transcription, transcription regulation
- 3ggg.pdb.
oxidoreductase 27-feb-09 3ggg
Title: the crystal structure of a. aeolicus prephenate dehydrogenase in complex with tyrosine and nad+
Author: w. sun, d. shahinas, d. christendat
Keywords: beta-alpha, tyrosine-bound, nad, oxidoreductase
- 3ggo.pdb.
oxidoreductase 01-mar-09 3ggo
Title: crystal structure of prephenate dehydrogenase from a. aeolicus with hpp and nadh
Author: w. sun, d. shahinas, d. christendat
Keywords: hpp, nadh, alpha-beta, oxidoreductase
- 3ggp.pdb.
oxidoreductase 01-mar-09 3ggp
Cl
Title: crystal structure of prephenate dehydrogenase from a. aeolicus in complex with hydroxyphenyl propionate and nad+
Author: w. sun, d. shahinas, m. s. kimber, d. christendat
Keywords: tyra, prephenate dehydrogenase, alpha-beta, oxidoreductase
- 3ggs.pdb.
transferase 02-mar-09 3ggs
F
Title: human purine nucleoside phosphorylase double mutant e201q, n243d complexed with 2-fluoro-2'-deoxyadenosine
Author: m. r. sawaya, s. afshar
Keywords: acetylation, disease mutation, glycosyltransferase, polymorphism, transferase
- 3ghg.pdb.
blood clotting 03-mar-09 3ghg
Ca
Title: crystal structure of human fibrinogen
Author: r. f. doolittle, j. m. kollman, m. r. sawaya, l. pandi, m. riley
Keywords: pyrrolidone carboxylic acid, calcium, sulfation, blood clotting
- 3gii.pdb.
transferase/dna 05-mar-09 3gii
Na Ca
Title: dpo4 extension ternary complex with disordered a opposite an oxog in anti conformation
Author: o. rechkoblit, l. malinina, d. j. patel
Keywords: transferase, transferase/dna complex
- 3gij.pdb.
transferase/dna 05-mar-09 3gij
Ca
Title: dpo4 extension ternary complex with oxog(syn)-a(anti) and oxog(anti)-a(syn) pairs
Author: o. rechkoblit, l. malinina, d. j. patel
Keywords: transferase, transferase/dna complex
- 3gik.pdb.
transferase/dna 05-mar-09 3gik
Ca
Title: dpo4 extension ternary complex with the oxog(anti)-c(anti) pair
Author: o. rechkoblit, l. malinina, d. j. patel
Keywords: transferase, transferase/dna complex
- 3gil.pdb.
transferase/dna 05-mar-09 3gil
Ca
Title: dpo4 extension ternary complex with oxog(anti)-t(anti) pair
Author: o. rechkoblit, l. malinina, d. j. patel
Keywords: transferase, transferase/dna complex
- 3gim.pdb.
transferase/dna 05-mar-09 3gim
Ca
Title: dpo4 extension ternary complex with oxog(anti)-g(syn) pair
Author: o. rechkoblit, l. malinina, d. j. patel
Keywords: transferase, transferase/dna complex
- 3glb.pdb.
transcription 11-mar-09 3glb
Title: crystal structure of the effector binding domain of a catm variant (r156h)
Author: o. c. ezezika, s. h. craven, e. l. neidle, c. momany
Keywords: benm, catm, transcriptional activator, lysr-type transcriptional regulator, activator, aromatic hydrocarbons catabolism, dna-binding, repressor, transcription, transcription regulation
- 3gna.pdb.
recombination 16-mar-09 3gna
Title: crystal structure of the rag1 nonamer-binding domain with dna
Author: f. f. yin, s. bailey, c. a. innis, t. a. steitz, d. g. schatz
Keywords: dna recombination, dna-binding, endonuclease, hydrolase, metal-binding, nuclease, nucleus, zinc, zinc-finger, amino-acid biosynthesis, cytoplasm, isomerase, lysine biosynthesis
- 3gnb.pdb.
recombination 16-mar-09 3gnb
Title: crystal structure of the rag1 nonamer-binding domain with dna
Author: f. f. yin, s. bailey, c. a. innis, t. a. steitz, d. g. schatz
Keywords: dna recombination, dna-binding, endonuclease, hydrolase, metal-binding, nuclease, nucleus, zinc, zinc-finger
- 3goi.pdb.
transferase 19-mar-09 3goi
Title: human glucokinase in complex with a synthetic activator
Author: k. kamata, m. mitsuya
Keywords: diabetes, allosteric activator, atp-binding, glycolysis, kinase, nucleotide-binding, transferase
- 3gor.pdb.
structural genomics, unknown function 19-mar-09 3gor
Ni Se
Title: crystal structure of putative metal-dependent hydrolase apc36150
Author: d. r. cooper, k. grelewska, z. s. derewenda, integrated center for structure and function innovation (isfi)
Keywords: dinb superfamily, psi-2, protein structure initiative, integrated center for structure and function innovation, isfi, unknown function
- 3gqc.pdb.
transferase/dna 24-mar-09 3gqc
Mg
Title: structure of human rev1-dna-dntp ternary complex
Author: m. k. swan, a. k. aggarwal
Keywords: alternative splicing, dna damage, dna repair, dna synthesis, dna-binding, magnesium, metal- binding, nucleotidyltransferase, nucleus, polymorphism, transferase, transferase/dna complex
- 3gr0.pdb.
membrane protein 24-mar-09 3gr0
Title: periplasmic domain of the t3ss inner membrane protein prgh from s.typhimurium (fragment 170-362)
Author: c. k. yip, m. vockovic, a. c. yu, n. c. j. strynadka
Keywords: inner membrane protein, cell membrane, membrane, transmembrane, virulence
- 3gr1.pdb.
membrane protein 24-mar-09 3gr1
Title: periplamic domain of the t3ss inner membrane protein prgh from s.typhimurium (fragment 170-392)
Author: c. k. yip, m. vockovic, a. c. yu, n. c. j. strynadka
Keywords: inner membrane protein, cell membrane, membrane, transmembrane, virulence
- 3gr5.pdb.
membrane protein 24-mar-09 3gr5
Title: periplasmic domain of the outer membrane secretin escc from enteropathogenic e.coli (epec)
Author: c. k. yip, m. vockovic, n. c. j. strynadka
Keywords: type iii secretion system, outer membrane, transport, membrane protein
- 3gri.pdb.
hydrolase 25-mar-09 3gri
Cl Zn Ca Se
Title: the crystal structure of a dihydroorotase from staphylococcus aureus
Author: j. s. brunzelle, z. wawrzak, t. skarina, o. onopriyenko, a. savchenko, w. f. anderson, center for structural genomics of infectious diseases (csgid)
Keywords: idp00795, metal-binding, pyrimidine biosynthesis, zinc, structural genomics, center for structural genomics of infectious diseases, csgid
- 3gsj.pdb.
dna 27-mar-09 3gsj
Cl Rh Na
Title: a bulky rhodium complex bound to an adenosine-adenosine dna mismatch
Author: b. m. zeglis, v. c. pierre, j. t. kaiser, j. k. barton
Keywords: metallointercalator, dna recognition
- 3gsk.pdb.
dna 27-mar-09 3gsk
Ho Rh As
Title: a bulky rhodium complex bound to an adenosine-adenosine dna mismatch
Author: b. m. zeglis, v. c. pierre, j. t. kaiser, j. k. barton
Keywords: metallointercalator, dna recognition
- 3h08.pdb.
hydrolase 08-apr-09 3h08
Mg
Title: crystal structure of the ribonuclease h1 from chlorobium tepidum
Author: k. ratcliff, j. corn, s. marqusee
Keywords: 3d-structure, endonuclease, hydrolase, magnesium, metal-binding, nuclease
- 3h11.pdb.
apoptosis 10-apr-09 3h11
Title: zymogen caspase-8:c-flipl protease domain complex
Author: p. d. jeffrey, j. w. wu, y. shi
Keywords: apoptosis, caspase, alternative splicing, host- virus interaction, polymorphism, cytoplasm, disease mutation, hydrolase, phosphoprotein, protease, thiol protease, zymogen
- 3h13.pdb.
apoptosis 10-apr-09 3h13
Title: c-flipl protease-like domain
Author: p. d. jeffrey, j. w. yu, y. shi
Keywords: dimer, cell death, alternative splicing, apoptosis, host-virus interaction, polymorphism
- 3h1c.pdb.
transferase 11-apr-09 3h1c
W
Title: crystal structure of polynucleotide phosphorylase (pnpase) core bound to rnase e and tungstate
Author: s. nurmohamed
Keywords: rna turnover, transferase, cytoplasm, nucleotidyltransferase, rna-binding, stress response, endonuclease, hydrolase, nuclease
- 3h1m.pdb.
isomerase 13-apr-09 3h1m
Zn
Title: crystal structure of mannose 6-phosphate isomerase (holo; zinc bound)
Author: s. r. sagurthi, g. giri, h. s. savithri, m. r. n. murthy
Keywords: cupin domain, cytoplasm, isomerase, metal-binding, zinc
- 3h1n.pdb.
transferase 13-apr-09 3h1n
Cl Se
Title: crystal structure of probable glutathione s-transferase from bordetella bronchiseptica rb50
Author: k. tan, x. xu, h. cui, a. savchenko, a. m. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: glutathione s-transferase, bordetella bronchiseptica rb50, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, transferase
- 3h1q.pdb.
structural protein 13-apr-09 3h1q
Se
Title: crystal structure of ethanolamine utilization protein eutj from carboxydothermus hydrogenoformans
Author: c. chang, c. tesar, r. jedrzejczak, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: ethanolamine utilization protein eutj, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, structural protein
- 3h1w.pdb.
isomerase 14-apr-09 3h1w
Zn Y
Title: crystal structure of mannose 6-phosphate isomerase bound with zinc and yttrium
Author: s. r. sagurthi, g. giri, h. s. savithri, m. r. n. murthy
Keywords: yttrium bound, cupin, isomerase
- 3h1y.pdb.
isomerase 14-apr-09 3h1y
Zn
Title: crystal structure of mannose 6-phosphate isomerase from salmonella typhimurium bound to substrate (f6p)and metal atom (zn)
Author: s. r. sagurthi, g. giri, h. s. savithri, m. r. n. murthy
Keywords: f6p complex structure, cupin domain
- 3h2t.pdb.
viral protein 14-apr-09 3h2t
Title: crystal structure of gene product 6, baseplate protein of bacteriophage t4
Author: a. a. aksyuk, p. g. leiman, m. m. shneider, v. v. mesyanzhinov, m. g. rossmann
Keywords: virion
- 3h3w.pdb.
viral protein 17-apr-09 3h3w
(electron microscopy)
Title: fitting of the gp6 crystal structure into 3d cryo-em reconstruction of bacteriophage t4 dome-shaped baseplate
Author: a. a. aksyuk, p. g. leiman, m. m. shneider, v. v. mesyanzhinov, m. g. rossmann
Keywords: virion, viral protein
- 3h3y.pdb.
viral protein 17-apr-09 3h3y
(electron microscopy)
Title: fitting of the gp6 crystal structure into 3d cryo-em reconstruction of bacteriophage t4 star-shaped baseplate
Author: a. a. aksyuk, p. g. leiman, m. m. shneider, v. v. mesyanzhinov, m. g. rossmann
Keywords: virion, viral protein
- 3h4o.pdb.
oxidoreductase 20-apr-09 3h4o
Se
Title: crystal structure of nitroreductase family protein (yp_001089872.1) from clostridium difficile 630 at 1.50 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: nitroreductase family protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, oxidoreductase
- 3h4s.pdb.
motor protein/calcium binding protein 20-apr-09 3h4s
Mg Ca
Title: structure of the complex of a mitotic kinesin with its calcium binding regulator
Author: m. v. vinogradova
Keywords: motor protein, regulation, complex, calcium, ef- hand, calmodulin, atp-binding, microtubule, nucleotide- binding, motor protein/calcium binding protein complex
- 3h5x.pdb.
transferase/rna 22-apr-09 3h5x
Mn
Title: crystal structure of 2'-amino-2'-deoxy-cytidine-5'- triphosphate bound to norovirus gii rna polymerase
Author: d. f. zamyatkin, f. parra, a. machin, p. grochulski, k. k. s. ng
Keywords: transferase/rna complex
- 3h5y.pdb.
transferase/rna 22-apr-09 3h5y
Mn
Title: norovirus polymerase+primer/template+ctp complex at 6 mm mncl2
Author: d. f. zamyatkin, f. parra, a. machin, p. grochulski, k. k. s. ng
Keywords: viral rna polymerase, hydrolase, nucleotide- binding, nucleotidyltransferase, protease, rna replication, rna-directed rna polymerase, thiol protease, transferase, transferase/rna complex
- 3h6n.pdb.
signaling protein 23-apr-09 3h6n
Se As
Title: crystal structure of the ubiquitin-like domain of plexin d1
Author: y. tong, l. nedyalkova, w. tempel, f. mackenzie, c. h. arrowsmith, a. m. edwards, c. bountra, j. weigelt, a. bochkarev, m. buck, h. park, structural genomics consortium (sgc)
Keywords: sgc, membrane, transmembrane, receptor, alternative splicing, cell membrane, glycoprotein, polymorphism, signaling protein
- 3h9f.pdb.
transferase 30-apr-09 3h9f
Mg
Title: crystal structure of human dual specificity protein kinase (ttk) in complex with a pyrimido-diazepin ligand
Author: p. filippakopoulos, m. soundararajan, t. keates, j. m. elkins, o. king, o. fedorov, s. s. picaud, a. c. w. pike, w. yue, a. chaikuad, f. von delft, c. h. arrowsmith, a. edwards, j. weigelt, c. bountra, n. kwiatkowski, n. grey, s. knapp, structural genomics consortium (sgc)
Keywords: serine/threonine-protein kinase, transferase, tyrosine-protein kinase
- 3h9n.pdb.
ribosomal protein 30-apr-09 3h9n
Se
Title: crystal structure of the ribosome maturation factor rimm (hi0203) from h.influenzae. northeast structural genomics consortium target ir66.
Author: a. kuzin, m. su, j. seetharaman, m. mao, r. xiao, m. maglaqui, l. zhao, j. k. everett, r. nair, t. b. acton, b. rost, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, ir66, rimm, chaperone, cytoplasm, ribosome biogenesis, ribosomal protein
- 3h9p.pdb.
structural genomics, unknown function 30-apr-09 3h9p
Cl Se
Title: crystal structure of putative triphosphoribosyl-dephospho- coa synthase from archaeoglobus fulgidus
Author: c. chang, r. wu, m. gu, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: putative triphosphoribosyl- dephospho-coa synthase, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
- 3h9w.pdb.
structural genomics, unknown function 30-apr-09 3h9w
Se
Title: crystal structure of the n-terminal domain of diguanylate cyclase with pas/pac sensor (maqu_2914) from marinobacter aquaeolei, northeast structural genomics consortium target mqr66c
Author: j. seetharaman, m. su, h. wang, e. l. foote, l. mao, r. nair, b. rost, t. b. acton, r. xiao, j. k. everett, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, unknown function
- 3h9x.pdb.
structural genomics, unknown function 30-apr-09 3h9x
Se
Title: crystal structure of the pspto_3016 protein from pseudomonas syringae, northeast structural genomics consortium target psr293
Author: j. seetharaman, s. lew, f. forouhar, h. hamilton, r. xiao, c. ciccosanti, e. l. foote, l. zhao, j. k. everett, r. nair, t. b. acton, b. rost, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, unknown function
- 3ha9.pdb.
structural genomics, unknown function 01-may-09 3ha9
Title: the 1.7a crystal structure of a thioredoxin-like protein from aeropyrum pernix
Author: a. j. stein, m. e. cuff, a. sather, r. hendricks, l. freeman, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: aeropyrum, pernix, psi, mcsg, structural genomics, midwest center for structural genomics, protein structure initiative, unknown function
- 3hae.pdb.
immune system 01-may-09 3hae
Title: rational development of high-affinity t-cell receptor-like antibodies
Author: g. stewart-jones, a. wadle, a. hombach, e. shenderov, g. held, e. fischer
Keywords: disease mutation, glycation, immunoglobulin domain, pyrrolidone carboxylic acid, secreted, immune system
- 3hba.pdb.
transferase 04-may-09 3hba
Se
Title: crystal structure of putative phosphosugar isomerase (yp_563707.1) from shewanella denitrificans os-217 at 2.00 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: putative phosphosugar isomerase, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, aminotransferase, transferase
- 3hbb.pdb.
oxidoreductase, transferase 04-may-09 3hbb
Title: structures of dihydrofolate reductase-thymidylate synthase of trypanosoma cruzi in the folate-free state and in complex with two antifolate drugs, trimetrexate and methotrexate
Author: n. schormann, o. senkovich, d. chattopadhyay
Keywords: oxidoreductase, transferase
- 3hcw.pdb.
rna binding protein 06-may-09 3hcw
Title: crystal structure of probable maltose operon transcriptional repressor malr from staphylococcus areus
Author: y. patskovsky, r. toro, c. morano, j. freeman, s. chang, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: rna binding, rna binding protein
- 3hcz.pdb.
structural genomics, unknown function 06-may-09 3hcz
Se
Title: the crystal structure of a domain of possible thiol- disulfide isomerase from cytophaga hutchinsonii atcc 33406.
Author: k. tan, n. marshall, g. cobb, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: thiol-disulfide isomerase, cytophaga hutchinsonii atcc, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, isomerase, unknown function
- 3hd5.pdb.
oxidoreductase 06-may-09 3hd5
Se
Title: crystal structure of a thiol:disulfide interchange protein dsba from bordetella parapertussis
Author: k. palani, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: oxidoreductase
- 3hdg.pdb.
structural genomics, unknown function 07-may-09 3hdg
Mg Se
Title: crystal structure of the n-terminal domain of an uncharacterized protein (ws1339) from wolinella succinogenes
Author: s. eswaramoorthy, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: response regulator, psi-ii, 11227f, nysgxrc, structural genomics, protein structure initiative, new york sgx research center for structural genomics, unknown function
- 3hdj.pdb.
structural genomics, unknown function 07-may-09 3hdj
Cl Se
Title: the crystal structure of probable ornithine cyclodeaminase from bordetella pertussis tohama i
Author: k. tan, a. sather, s. clancy, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: ornithine cyclodeaminase, bordetella pertussis tohama i, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
- 3hdo.pdb.
transferase 07-may-09 3hdo
Mg Se
Title: crystal structure of a histidinol-phosphate aminotransferase from geobacter metallireducens
Author: l. damodharan, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: aminotransferase, histidine biosynthesis, pyridoxal phosphate
- 3hdx.pdb.
polysaccharide binding protein 07-may-09 3hdx
Se
Title: crystal structure of susd superfamily protein (np_809182.1) from bacteriodes thetaiotaomicron vpi-5482 at 1.50 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: susd superfamily protein, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, carbohydrate metabolism, polysaccharide binding protein
- 3heb.pdb.
transcription regulator 08-may-09 3heb
Se
Title: crystal structure of response regulator receiver domain from rhodospirillum rubrum
Author: b. syed ibrahim, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: psi-ii, receiver domain, respose regulator, 11237b, protein structure initiative, crystal structure, structural genomics, new york sgx research center for structural genomics, transcription regulator
- 3hez.pdb.
de novo protein 10-may-09 3hez
Hg
Title: exploring backbone pattern in alpha/beta-peptide helix bundles: the gcn4-pli side chain sequence on different (alpha-alpha-alpha-beta) backbones
Author: w. s. horne, s. h. gellman
Keywords: foldamer, alpha/beta-peptide, coiled coil, de novo protein
- 3hf0.pdb.
de novo protein 10-may-09 3hf0
He
Title: alpha/beta-peptide helix crystallized from detergent solution: gcn4-pli side chain sequence on an (alpha-alpha- beta-alpha-beta-alpha-beta) backbone with cyclic beta- residues
Author: w. s. horne, j. l. price, s. h. gellman
Keywords: foldamer, alpha/beta-peptide, coiled coil, de novo protein
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