Recent PDB releases or updates: week of 3 April 2009
- 1c4a.pdb.
oxidoreductase 13-aug-99 1c4a
Fe
Title: binding of exogenously added carbon monoxide at the active site of the fe-only hydrogenase (cpi) from clostridium pasteurianum
Author: b. j. lemon, j. w. peters
Keywords: [fes] clusters, hydrogen oxidation, proton reduction, oxidoreductase
- 1c4c.pdb.
oxidoreductase 16-aug-99 1c4c
Fe
Title: binding of exogenously added carbon monoxide at the active site of the fe-only hydrogenase (cpi) from clostridium pasteurianum
Author: b. j. lemon, j. w. peters
Keywords: [fes] clusters, hydrogen oxidation, proton reduction, oxidoreductase
- 1c51.pdb.
photosynthesis/electron transport 21-oct-99 1c51
Mg Fe
Title: photosynthetic reaction center and core antenna system (trimeric), alpha carbon only
Author: o. klukas, w. d. schubert, p. jordan, n. krauss, p. fromme, h. t. witt, w. saenger
Keywords: photosynthetic reaction center, oxygenic photosynthesis, core- antenna light-harvesting system, thermophilic cyanobacterium, helix-bundle membrane protein, photosynthesis/electron transport complex
- 1djn.pdb.
oxidoreductase 03-dec-99 1djn
Fe
Title: structural and biochemical characterization of recombinant wild type trimethylamine dehydrogenase from methylophilus methylotrophus (sp. w3a1)
Author: p. trickey, j. basran, l. -y. lian, z. -w. chen, j. d. barton, m. j. sutcliffe, n. s. scrutton, f. s. mathews
Keywords: electron transfer, oxidoreductase
- 1e5q.pdb.
oxidoreductase 28-jul-00 1e5q
Title: ternary complex of saccharopine reductase from magnaporthe grisea, nadph and saccharopine
Author: e. johansson, j. j. steffens, y. lindqvist, g. schneider
Keywords: saccharopine reductase, nadph, lysine biosynthesis, alpha- aminoadipate pathway
- 1feh.pdb.
oxidoreductase 28-oct-98 1feh
Fe
Title: fe-only hydrogenase from clostridium pasteurianum
Author: j. w. peters, w. n. lanzilotta, b. j. lemon, l. c. seefeldt
- 1fp6.pdb.
oxidoreductase 30-aug-00 1fp6
Mg Fe
Title: the nitrogenase fe protein from azotobacter vinelandii complexed with mgadp
Author: s. b. jang, l. c. seefeldt, j. w. peters
Keywords: nitrogen fixation, nuclotide, mgadp, fe protein, av2, oxidoreductase
- 1g21.pdb.
oxidoreductase 16-oct-00 1g21
Mg Mo Fe Ca
Title: mgatp-bound and nucleotide-free structures of a nitrogenase protein complex between leu127del-fe protein and the mofe protein
Author: h. -j. chiu, j. w. peters, w. n. lanzilotta, m. j. ryle, l. c. seefeldt, j. b. howard, d. c. rees
Keywords: fe protein, moefe protein, p-cluster, femo cofactor, 4fe-4s, oxidoreductase
- 1gao.pdb.
electron transport 30-nov-00 1gao
Fe
Title: crystal structure of the l44s mutant of ferredoxin i
Author: c. d. stout, b. k. burgess, g. s. prasad, v. sridhar, y. s. jung
Keywords: ferredoxin, electron transport
- 1hho.pdb.
oxygen transport 10-jun-83 1hho
Fe
Title: structure of human oxyhaemoglobin at 2.1 angstroms resolution
Author: b. shaanan
- 1jnr.pdb.
oxidoreductase 25-jul-01 1jnr
Fe
Title: structure of adenylylsulfate reductase from the hyperthermophilic archaeoglobus fulgidus at 1.6 resolution
Author: g. fritz, a. roth, a. schiffer, t. buechert, g. bourenkov, h. d. bartunik, h. huber, k. o. stetter, p. m. h. kroneck, u. ermler
Keywords: oxidoreductase
- 1jnz.pdb.
oxidoreductase 26-jul-01 1jnz
Fe
Title: structure of adenylylsulfate reductase from the hyperthermophilic archaeoglobus fulgidus at 1.6 resolution
Author: g. fritz, a. roth, a. schiffer, t. buechert, g. bourenkov, h. d. bartunik, h. huber, k. o. stetter, p. m. kroneck, u. ermler
Keywords: adenylylsulfate reductase, iron-sulfur flavoprotein, crystal structure, catalysis, oxidoreductase
- 1kek.pdb.
oxidoreductase 16-nov-01 1kek
Mg Fe Ca
Title: crystal structure of the free radical intermediate of pyruvate:ferredoxin oxidoreductase
Author: e. chabriere, x. vernede, b. guigliarelli, m. -h. charon, e. c. hatchikian, j. c. fontecilla-camps
Keywords: 7 domains, oxidoreductase
- 1kf6.pdb.
oxidoreductase 19-nov-01 1kf6
K Fe
Title: e. coli quinol-fumarate reductase with bound inhibitor hqno
Author: t. m. iverson, c. luna-chavez, l. r. croal, g. cecchini, d. c. rees
Keywords: fumarate reductace, succinate dehydrogenase, complex ii, quinol, quinone, oxidoreductase
- 1kfy.pdb.
oxidoreductase 24-nov-01 1kfy
Cl Fe
Title: quinol-fumarate reductase with quinol inhibitor 2-[1-(4- chloro-phenyl)-ethyl]-4,6-dinitro-phenol
Author: t. m. iverson, c. luna-chavez, l. r. croal, g. cecchini, d. c. rees
Keywords: succinate dehydrogenase, quinone, quinol, respiration, membrane protein, oxidoreductase
- 1l9g.pdb.
hydrolase 22-mar-02 1l9g
Fe
Title: crystal structure of uracil-dna glycosylase from t. maritima
Author: k. r. rajashankar, t. dodatko, r. a. thirumuruhan, m. sandigursky, a. bresnik, m. r. chance, w. a. franklin, s. c. almo, s. k. burley, new york sgx research center for structural genomics (nysgxrc)
Keywords: base excision repair, uracil, thermophile, structural genomics, psi, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, hydrolase
- 1m1y.pdb.
oxidoreductase 20-jun-02 1m1y
Mo Fe Ca
Title: chemical crosslink of nitrogenase mofe protein and fe protein
Author: b. schmid, o. einsle, h. j. chiu, a. willing, m. yoshida, j. b. howard, d. c. rees
Keywords: nitrogen fixation, chemical crosslink, protein interaction, oxidoreductase
- 1m34.pdb.
oxidoreductase 27-jun-02 1m34
Mg F Mo Fe Al Ca
Title: nitrogenase complex from azotobacter vinelandii stabilized by adp-tetrafluoroaluminate
Author: b. schmid, o. einsle, h. -j. chiu, a. willing, m. yoshida, j. b. howard, d. c. howard, j. b. rees
Keywords: nitrogen fixation, signal transduction, electron transfer, atp hydrolysis, complex of nitrogenase proteins, oxidoreductase
- 1muy.pdb.
dna repair 20-aug-98 1muy
Fe
Title: catalytic domain of muty from escherichia coli
Author: y. guan, j. a. tainer
Keywords: dna g.a mismatch repair enzyme, glycosidase, hydrolase
- 1n2c.pdb.
complex of nitrogenase proteins 02-may-97 1n2c
Mg F Mo Fe Al Ca
Title: nitrogenase complex from azotobacter vinelandii stabilized by adp-tetrafluoroaluminate
Author: h. schindelin, c. kisker, d. c. rees
Keywords: nitrogen fixation, signal transduction, electron transfer, atp hydrolysis, complex of nitrogenase proteins
- 1nek.pdb.
oxidoreductase/electron transport 11-dec-02 1nek
Fe Ca
Title: complex ii (succinate dehydrogenase) from e. coli with ubiquinone bound
Author: v. yankovskaya, r. horsefield, s. tornroth, c. luna-chavez, h. miyoshi, c. leger, b. byrne, g. cecchini, s. iwata
Keywords: oxygen respiratory chain, oxidoreductase/electron transport complex
- 1nen.pdb.
oxidoreductase/electron transport 11-dec-02 1nen
Fe Ca
Title: complex ii (succinate dehydrogenase) from e. coli with dinitrophenol-17 inhibitor co-crystallized at the ubiquinone binding site
Author: v. yankovskaya, r. horsefield, s. tornroth, c. luna-chavez, h. miyoshi, c. leger, b. byrne, g. cecchini, s. iwata
Keywords: respiratory complex, oxidoreductase/electron transport complex
- 1orn.pdb.
hydrolase/dna 14-mar-03 1orn
Na Fe
Title: structure of a trapped endonuclease iii-dna covalent intermediate: estranged-guanine complex
Author: j. c. fromme, g. l. verdine
Keywords: dna glycosylase, [4fe-4s] cluster, iron-sulfur cluster, hydrolase/dna complex
- 1orp.pdb.
hydrolase/dna 14-mar-03 1orp
Na Fe
Title: structure of a trapped endonuclease iii-dna covalent intermediate: estranged-adenine complex
Author: j. c. fromme, g. l. verdine
Keywords: dna glycosylase, [4fe-4s] cluster, iron-sulfur cluster, hydrolase/dna complex
- 1p59.pdb.
hydrolase/dna 25-apr-03 1p59
I Na Fe
Title: structure of a non-covalent endonuclease iii-dna complex
Author: j. c. fromme, g. l. verdine
Keywords: dna glycosylase, [4fe-4s] cluster, iron-sulfur cluster, hydrolase/dna complex
- 1pqc.pdb.
transcription regulation 18-jun-03 1pqc
F
Title: human lxr beta hormone receptor complexed with t0901317
Author: m. farnegardh, t. bonn, s. sun, j. ljunggren, h. ahola, a. wilhelmsson, j. -a. gustafsson, m. carlquist
Keywords: transcription regulation
- 1prc.pdb.
photosynthetic reaction center 04-feb-88 1prc
Mg Fe
Title: crystallographic refinement at 2.3 angstroms resolution and refined model of the photosynthetic reaction center from rhodopseudomonas viridis
Author: j. deisenhofer, o. epp, k. miki, r. huber, h. michel
- 1puu.pdb.
sugar binding protein 25-jun-03 1puu
Cl
Title: mistletoe lectin i in complex with lactose
Author: r. krauspenhaar, w. voelter, s. stoeva, a. mikhailov, n. konareva, c. betzel
Keywords: sugar binding protein
- 1r27.pdb.
oxidoreductase 26-sep-03 1r27
Mo Fe
Title: crystal structure of nargh complex
Author: m. jormakka, d. richardson, b. byrne, s. iwata
Keywords: oxidoreductase
- 1r2c.pdb.
photosynthesis 26-sep-03 1r2c
Mg Fe
Title: photosynthetic reaction center blastochloris viridis (atcc)
Author: r. h. baxter, n. ponomarenko, r. pahl, v. srajer, k. moffat, j. r. norris
Keywords: secondary quinone (qb), photosynthesis
- 1rgv.pdb.
electron transport 13-nov-03 1rgv
Fe
Title: crystal structure of the ferredoxin from thauera aromatica
Author: m. unciuleac, m. boll, e. warkentin, u. ermler
- 1rm6.pdb.
oxidoreductase 27-nov-03 1rm6
Cl Mo K Na Fe
Title: structure of 4-hydroxybenzoyl-coa reductase from thauera aromatica
Author: m. unciuleac, e. warkentin, c. c. page, p. l. dutton, m. boll, u. ermler
Keywords: dimer heterotrimers, (a, b, c)2, oxidoreductase
- 1rrq.pdb.
hydrolase/dna 08-dec-03 1rrq
Fe Ca
Title: muty adenine glycosylase in complex with dna containing an a:oxog pair
Author: j. c. fromme, a. banerjee, s. j. huang, g. l. verdine
Keywords: dna glycosylase, 8-oxoguanine, protein-dna complex, hydrolase/dna complex
- 1rrs.pdb.
hydrolase/dna 08-dec-03 1rrs
Fe Ca
Title: muty adenine glycosylase in complex with dna containing an abasic site
Author: j. c. fromme, a. banerjee, s. j. huang, g. l. verdine
Keywords: dna glycosylase, 8-oxoguanine, protein-dna complex, hydrolase/dna complex
- 1rw4.pdb.
oxidoreductase 15-dec-03 1rw4
Fe
Title: nitrogenase fe protein l127 deletion variant
Author: s. sen, r. igarashi, a. smith, m. k. johnson, l. c. seefeldt, j. w. peters
- 1sb3.pdb.
oxidoreductase 10-feb-04 1sb3
Mo Fe
Title: structure of 4-hydroxybenzoyl-coa reductase from thauera aromatica
Author: m. unciuleac, e. warkentin, c. c. page, m. boll, u. ermler
Keywords: dimer of heterotrimers, (a, b, c)2, oxidoreductase
- 1su6.pdb.
oxidoreductase 26-mar-04 1su6
Fe Ni
Title: carbon monoxide dehydrogenase from carboxydothermus hydrogenoformans: co reduced state
Author: h. dobbek, v. svetlitchnyi, j. liss, o. meyer
Keywords: nickel, carbon monoxide, carbon monoxide dehydrogenase, cluster c, oxidoreductase
- 1su7.pdb.
oxidoreductase 26-mar-04 1su7
Fe Ni
Title: carbon monoxide dehydrogenase from carboxydothermus hydrogenoformans- dtt reduced state
Author: h. dobbek, v. svetlitchnyi, j. liss, o. meyer
Keywords: carbon monoxide dehydrogenase, nickel, cluster c, oxidoreductase
- 1su8.pdb.
oxidoreductase 26-mar-04 1su8
Fe Ni
Title: carbon monoxide induced decomposition of the active site [ni-4fe-5s] cluster of co dehydrogenase
Author: h. dobbek, v. svetlitchnyi, j. liss, o. meyer
Keywords: codh, carbon monoxide dehydrogenase, cluster c, oxidoreductase
- 1vrl.pdb.
hydrolase/dna 08-mar-05 1vrl
Fe Ca
Title: muty adenine glycosylase in complex with dna and soaked adenine free base
Author: j. c. fromme, a. banerjee, s. j. huang, g. l. verdine
Keywords: dna glycosylase, 8-oxoguanine, protein-dna complex, hydrolase/dna complex
- 1vrn.pdb.
photosynthesis 23-feb-05 1vrn
Mg Fe
Title: photosynthetic reaction center blastochloris viridis (atcc)
Author: r. h. g. baxter, b. -l. seagle, j. r. norris
Keywords: photosynthesis
- 1xzp.pdb.
hydrolase 12-nov-04 1xzp
Title: structure of the gtp-binding protein trme from thermotoga maritima
Author: a. scrima, i. r. vetter, m. e. armengod, a. wittinghofer
Keywords: thf-binding, trna-modification, hydrolase
- 1yq3.pdb.
oxidoreductase 01-feb-05 1yq3
Fe
Title: avian respiratory complex ii with oxaloacetate and ubiquinone
Author: l. huang, d. cobessi, e. y. tung, e. a. berry
Keywords: membrane protein, heme protein, iron sulfur protein, cytochrome b, oxidoreductase, redox enzyme, respiratory chain, oxaloacetate ubiquinone
- 1zel.pdb.
structural genomics, unknown function 19-apr-05 1zel
Na
Title: crystal structure of rv2827c protein from mycobacterium tuberculosis
Author: r. janowski, s. panjikar, j. mueller-dieckmann, m. s. weiss, tb structural genomics consortium (tbsgc)
Keywords: hypothetical protein, winged-helix, helix-turn- helix, auto-rickshaw, structural genomics, psi, protein structure initiative, tb structural genomics consortium, tbsgc, unknown function
- 2afh.pdb.
oxidoreductase 25-jul-05 2afh
Mo Na Fe Ca
Title: crystal structure of nucleotide-free av2-av1 complex
Author: f. a. tezcan, j. t. kaiser, d. mustafi, m. y. walton, j. b. howard, d. c. rees
Keywords: iron-sulfur, metal-binding, molybdenum, oxidoreductase
- 2afi.pdb.
oxidoreductase 25-jul-05 2afi
Mg Mo Fe Ca
Title: crystal structure of mgadp bound av2-av1 complex
Author: f. a. tezcan, j. t. kaiser, d. mustafi, m. y. walton, j. b. howard, d. c. rees
Keywords: iron-sulfur, metal-binding, molybdenum, oxidoreductase
- 2afk.pdb.
oxidoreductase 26-jul-05 2afk
Mg Mo Fe Ca
Title: crystal structure of mgamppcp-bound av2-av1 complex
Author: f. a. tezcan, j. t. kaiser, d. mustafi, m. y. walton, j. b. howard, d. c. rees
Keywords: iron-sulfur, metal-binding, molybdenum, oxidoreductase
- 2ani.pdb.
oxidoreductase 11-aug-05 2ani
Fe Pb
Title: crystal structure of the f127y mutant of ribonucleotide reductase r2 from chlamydia trachomatis
Author: m. hogbom, p. stenmark, p. nordlund
Keywords: radical, oxidoreductase
- 2et0.pdb.
dna 27-oct-05 2et0
Fe
Title: the structure of a three-way dna junction in complex with a metallo-supramolecular helicate reveals a new target for drugs
Author: a. oleksi, a. g. blanco, r. boer, i. uson, j. aymami, m. coll
Keywords: 3-way junction, dna structure recognition
- 2fbw.pdb.
oxidoreductase 10-dec-05 2fbw
K Cd At
Title: avian respiratory complex ii with carboxin bound
Author: l. s. huang, g. sun, d. cobessi, a. c. wang, j. t. shen, e. y. tung, v. e. anderson, e. a. berry
Keywords: membrane protein, heme protein, iron sulfur protein, cytochrome b, oxidoreductase, redox enzyme, respiratory chain, oxaloacetate nitropropionate ubiquinone
- 2fja.pdb.
oxidoreductase 02-jan-06 2fja
Fe
Title: adenosine 5'-phosphosulfate reductase in complex with substrate
Author: a. schiffer, g. fritz, p. m. kroneck, u. ermler
Keywords: adenylyl-phosphosulfate reductase, sulfur cycle, oxidoreductase
- 2fjb.pdb.
oxidoreductase 02-jan-06 2fjb
Na Fe
Title: adenosine-5'-phosphosulfate reductase im complex with products
Author: a. schiffer, g. fritz, p. m. kroneck, u. ermler
Keywords: sulfur cycle, oxidoreductase
- 2fjd.pdb.
oxidoreductase 02-jan-06 2fjd
Fe
Title: adenosine-5-phosphosulfate reductase in complex with sulfite (covalent adduct)
Author: a. schiffer, g. fritz, p. m. kroneck, u. ermler
Keywords: sulfur cycle, oxidoreductase
- 2fje.pdb.
oxidoreductase 02-jan-06 2fje
Fe
Title: adenosine-5-phosphosulfate reductase oxidized state
Author: a. schiffer, g. fritz, p. m. kroneck, u. ermler
Keywords: sulfur cycle, oxidoreductase
- 2gkc.pdb.
ligand binding protein 01-apr-06 2gkc
He Hg Ho I
(solution NMR)
Title: structural insight into self-sacrifice mechanism of enediyne resistance
Author: s. singh, j. s. thorson, j. l. markley, m. h. hager, c. zhang, m. s. lee
Keywords: ligand binding protein
- 2gkd.pdb.
toxin/dna 01-apr-06 2gkd
He Hg Ho
(solution NMR)
Title: structural insight into self-sacrifice mechanism of enediyne resistance
Author: s. singh, j. s. thorson
Keywords: toxin/dna complex
- 2gmj.pdb.
oxidoreductase 06-apr-06 2gmj
Fe
Title: structure of porcine electron transfer flavoprotein- ubiquinone oxidoreductase
Author: j. zhang, f. e. frerman, j. -j. p. kim
Keywords: flavoprotein, oxidoreductase, ubiquinone
- 2h9a.pdb.
oxidoreductase 09-jun-06 2h9a
Co I Fe
Title: corrinoid iron-sulfur protein
Author: h. dobbek
Keywords: beta-alpha-barrels, oxidoreductase
- 2i5n.pdb.
photosynthesis 25-aug-06 2i5n
Mg Fe
Title: 1.96 a x-ray structure of photosynthetic reaction center from rhodopseudomonas viridis:crystals grown by microfluidic technique
Author: l. li, d. mustafi, q. fu, v. tereshko, d. l. chen, j. d. tice, r. f. ismagilov
Keywords: secondary quinone (qb), microfluidic technique, hybrid, microbatch, plug, photosynthesis
- 2is0.pdb.
hydrolase 16-oct-06 2is0
F
Title: crystal structure of human beta-secretase complexed with inhibitor
Author: s. munshi
Keywords: hydrolase
- 2jlp.pdb.
oxidoreductase 14-sep-08 2jlp
Cu Zn
Title: crystal structure of human extracellular copper-zinc superoxide dismutase.
Author: s. antonyuk, r. strange, s. marklund, s. hasnain
Keywords: oxidoreductase, heparin binding, heparin-binding, oxidative stress, antioxidant, polymorphism, glycoprotein, metal-binding, zinc, cu-zn, copper, secreted, glycation
- 2jx6.pdb.
antimicrobial protein 08-nov-07 2jx6
Hg
(solution NMR)
Title: structure and membrane interactions of the antibiotic peptide dermadistinctin k by solution and oriented 15n and 31p solid-state nmr spectroscopy
Author: c. mendonca moraes, r. m. verly, j. m. resende, m. p. bemquerer, d. pilo-veloso, a. valente, f. c. l. almeida, b. bechinger
Keywords: alpha helix, amphipathic character, c-terminal carboxyamidation, membrane peptide, amphibian defense peptide, antibiotic, antimicrobial, secreted, antimicrobial protein
- 2jzv.pdb.
isomerase 21-jan-08 2jzv
He Hg
(solution NMR)
Title: solution structure of s. aureus prsa-ppiase
Author: r. seppala, h. tossavainen, s. heikkinen, h. koskela, v. kontinen, p. permi
Keywords: parvulin, foldase, staphylococcus aureus, proline isomerase, lipoprotein, membrane, palmitate, rotamase
- 2k0r.pdb.
oxidoreductase 13-feb-08 2k0r
He Hg
(solution NMR)
Title: solution structure of the c103s mutant of the n-terminal domain of dsbd from neisseria meningitidis
Author: m. quinternet, l. selme, p. tsan, c. beaufils, c. jacob, s. boschi- muller, m. averlant-petit, g. branlant, m. cung
Keywords: mutant, n-terminal domain, disulfide bond reductase, cytochrome c-type biogenesis, electron transport, inner membrane, membrane, nad, oxidoreductase, redox-active center, transmembrane, transport
- 2k1r.pdb.
hydrolase/chaperone 14-mar-08 2k1r
He Hg Cu
(solution NMR)
Title: the solution nmr structure of the complex between mnk1 and hah1 mediated by cu(i)
Author: i. bertini, l. c. banci, i. c. felli, a. pavelkova, a. rosato, structural proteomics in europe (spine)
Keywords: hydrolase/chaperone complex, structural genomics
- 2k3t.pdb.
structural protein 16-may-08 2k3t
He Hg
(solution NMR)
Title: solution structure of ig-like domain 23 from human filamin a
Author: o. k. heikkinen, j. ylanne, i. kilpelainen, o. kupiainen
Keywords: ig-like, immunoglobulin, acetylation, actin- binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein, polymorphism, structural protein
- 2k3v.pdb.
electron transport 19-may-08 2k3v
He Hg Fe
(solution NMR)
Title: solution structure of a tetrahaem cytochrome from shewanella frigidimarina
Author: v. b. paixao, d. l. turner, c. a. salgueiro, l. brennan, g. a. reid, s. k. chapman
Keywords: redox proteins, nmr, shewanella, electron transport, heme, iron, metal-binding, periplasm, transport
- 2kbq.pdb.
structural protein 05-dec-08 2kbq
He Hg
(solution NMR)
Title: solution structure of harmonin n terminal domain
Author: m. zhang, l. pan, j. yan, l. wu
Keywords: alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism, retinitis pigmentosa, sensory transduction, usher syndrome, vision, structural protein
- 2kbr.pdb.
structural protein/cell adhesion 05-dec-08 2kbr
He Hg
(solution NMR)
Title: solution structure of harmonin n terminal domain in complex with a internal peptide of cadherin23
Author: l. pan, j. yan, l. wu, m. zhang
Keywords: disease mutation, glycoprotein, membrane, phosphoprotein, transmembrane, structural protein/cell adhesion complex
- 2kbs.pdb.
structural protein/cell adhesion 05-dec-08 2kbs
He Hg
(solution NMR)
Title: solution structure of harmonin pdz2 in complex with the carboxyl tail peptide of cadherin23
Author: l. pan, j. yan, l. wu, m. zhang
Keywords: disease mutation, glycoprotein, membrane, phosphoprotein, transmembrane, structural protein/cell adhesion complex
- 2kfq.pdb.
de novo protein 26-feb-09 2kfq
Hg
(solution NMR)
Title: nmr structure of fp1
Author: m. araki, a. tamura
Keywords: de novo protein
- 2kg4.pdb.
cell cycle 04-mar-09 2kg4
He Hg
(solution NMR)
Title: three-dimensional structure of human gadd45alpha in solution by nmr
Author: r. sanchez, d. pantoja-uceda, j. prieto, t. diercks, r. campos- olivas, f. blanco
Keywords: growth arrest, dna damage, flexible regions, monomer, cell cycle
- 2kgo.pdb.
structural genomics, unknown function 13-mar-09 2kgo
He Hg Zn
(solution NMR)
Title: solution nmr structure of zn finger protein ybil from escherichia coli. nesg target et107, ocsp target ec0402
Author: a. gutmanas, a. yee, a. lemak, c. fares, v. guido, c. h. arrowsmith, northeast structural genomics consortium (nesg), ontario centre for structural proteomics (ocsp)
Keywords: nesg, ontario centre for structural proteomics, ocsp
- 2kgr.pdb.
protein binding 16-mar-09 2kgr
He Hg
(solution NMR)
Title: solution structure of protein itsn1 from homo sapiens. northeast structural genomics consortium target hr5524a
Author: y. wu, a. ghosh, r. shastry, j. hua, c. ciccosanti, q. zhang, m. jiang, g. swapna, t. acton, r. xiao, j. everett, g. montelione, t. szyperski, northeast structural genomics consortium (nesg)
Keywords: protein structure initiative, northeast structural genomics consortium, nesg, protein binding
- 2kgx.pdb.
cell adhesion 23-mar-09 2kgx
He
(solution NMR)
Title: haddock structure of the talin f3 domain in complex with talin 1655-1822
Author: b. t. goult, a. r. gingras, n. bate, d. r. critchley, i. l. barsukov
Keywords: interdomain, f3, cytoskeleton, cell membrane, cell projection, cytoplasm, membrane, phosphoprotein, cell adhesion
- 2nmp.pdb.
lyase 23-oct-06 2nmp
Title: crystal structure of human cystathionine gamma lyase
Author: t. karlberg, j. uppenberg, c. arrowsmith, h. berglund, r. d. busam, r. collins, a. edwards, u. b. ericsson, s. flodin, a. flores, s. graslund, b. m. hallberg, m. hammarstrom, m. hogbom, i. johansson, t. kotenyova, a. magnusdottir, m. moche, m. e. nilsson, p. nordlund, t. nyman, d. ogg, c. persson, j. sagemark, p. stenmark, m. sundstrom, a. g. thorsell, s. van-den-berg, k. wallden, j. weigelt, l. holmberg- schiavone, structural genomics consortium (sgc)
Keywords: lyase, pyridoxal phopshate, structural genomics, structural genomics consortium, sgc
- 2p5z.pdb.
structural genomics, unknown function 16-mar-07 2p5z
Title: the e. coli c3393 protein is a component of the type vi secretion system and exhibits structural similarity to t4 bacteriophage tail proteins gp27 and gp5
Author: u. a. ramagopal, j. b. bonanno, v. sridhar, c. lau, r. toro, t. gheyi, m. maletic, j. c. freeman, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: unknown function, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc
- 2prc.pdb.
photosynthetic reaction center 29-jul-97 2prc
Mg Fe
Title: photosynthetic reaction center from rhodopseudomonas viridis (ubiquinone-2 complex)
Author: c. r. d. lancaster, h. michel
Keywords: secondary quinone (qb)
- 2q9m.pdb.
hydrolase 13-jun-07 2q9m
Title: 4-substituted trinems as broad spectrum-lactamase inhibitors: structure-based design, synthesis and biological activity
Author: i. plantan, l. selic, t. mesar, p. stefanic anderluh, m. oblak, a. prezelj, l. hesse, m. andrejasic, m. vilar, d. turk, a. kocijan, t. prevec, g. vilfan, d. kocjan, a. copar, u. urleb, t. solmajer
Keywords: tricyclic carbapenem, hydrolase
- 2q9n.pdb.
hydrolase 13-jun-07 2q9n
Title: 4-substituted trinems as broad spectrum-lactamase inhibitors: structure-based design, synthesis and biological activity
Author: i. plantan, l. selic, t. mesar, p. stefanic anderluh, m. oblak, a. prezelj, l. hesse, m. andrejasic, m. vilar, d. turk, a. kocijan, t. prevec, g. vilfan, d. kocjan, a. copar, u. urleb, t. solmajer
Keywords: tricyclic carbapenem, hydrolase
- 2r4l.pdb.
transport protein 31-aug-07 2r4l
Title: crystal structure of the long-chain fatty acid transporter fadl mutant p34a
Author: e. m. hearn, d. r. patel, b. w. lepore, m. indic, b. van den berg
Keywords: outer membrane protein, lipid transport, phage recognition, transmembrane, transport, transport protein
- 2r4n.pdb.
transport protein 31-aug-07 2r4n
Title: crystal structure of the long-chain fatty acid transporter fadl mutant n33a
Author: e. m. hearn, d. r. patel, b. w. lepore, m. indic, b. van den berg
Keywords: outer membrane protein, lipid transport, phage recognition, transmembrane, transport, transport protein
- 2r4o.pdb.
transport protein 31-aug-07 2r4o
Title: crystal structure of the long-chain fatty acid transporter fadl mutant delta npa
Author: e. m. hearn, d. r. patel, b. w. lepore, m. indic, b. van den berg
Keywords: outer membrane protein, lipid transport, phage recognition, transmembrane, transport, transport protein
- 2r4p.pdb.
transport protein 31-aug-07 2r4p
Title: crystal structure of the long-chain fatty acid transporter fadl mutant g212e
Author: e. m. hearn, d. r. patel, b. w. lepore, m. indic, b. van den berg
Keywords: outer membrane protein, lipid transport, phage recognition, transmembrane, transport, transport protein
- 2r88.pdb.
transport protein 10-sep-07 2r88
Title: crystal structure of the long-chain fatty acid transporter fadl mutant delta s3 kink
Author: e. m. hearn, d. r. patel, b. w. lepore, m. indic, b. van den berg
Keywords: outer membrane protein, lipid transport, phage recognition, transmembrane, transport, transport protein
- 2rgs.pdb.
immune system 05-oct-07 2rgs
Title: fc-fragment of monoclonal antibody igg2b from mus musculus
Author: p. kolenko, j. duskova, t. skalova, j. dohnalek, j. hasek
Keywords: immunoglobulin, glycosylation, immune system
- 2rp0.pdb.
rna 25-apr-08 2rp0
Ho
(solution NMR)
Title: refined solution structure of the pemv-1 mrna pseudoknot, 28 lowest energy structures
Author: p. v. cornish, m. hennig, d. p. giedroc
Keywords: frameshifting
- 2rp1.pdb.
rna 25-apr-08 2rp1
Ho
(solution NMR)
Title: refined solution structure of the pemv-1 mrna pseudoknot, regularized average structure
Author: p. v. cornish, m. hennig, d. p. giedroc
Keywords: frameshifting
- 2rpc.pdb.
transcription 14-may-08 2rpc
He Hg Zn
(solution NMR)
Title: solution structure of the tandem zf-c2h2 domains from the human zinc finger protein zic 3
Author: t. tomizawa, t. kigawa, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
Keywords: nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
- 2rpi.pdb.
hydrolase 16-may-08 2rpi
Hg
(solution NMR)
Title: the nmr structure of the submillisecond folding intermediate of the thermus thermophilus ribonuclease h
Author: z. zhou, h. feng, y. bai
Keywords: thermus thermophilus ribonuclease h, high-resolution structure, endonuclease, hydrolase, magnesium, metal-binding, nuclease
- 2v04.pdb.
lipid-binding-protein 08-may-07 2v04
Title: crystal structure of choline binding protein f from streptococcus pneumoniae
Author: j. hermoso, r. molina, r. kahn, m. stelter
Keywords: choline-binding-protein, lipid-binding-protein
- 2vh7.pdb.
hydrolase 19-nov-07 2vh7
Title: crystal structure of human common-type acylphosphatase
Author: r. c. y. yeung, y. lam, k. b. wong
Keywords: acetylation
- 2vpu.pdb.
hydrolase 05-mar-08 2vpu
Cl Zn
Title: 3d structure of tet3 from pyrococcus horikoshii
Author: m. a. dura, e. rosenbaum, a. larabi, f. gabel, f. m. vellieux, b. franzetti
Keywords: protease, thermophilic, self-compartmentalising, hydrolase
- 2vqp.pdb.
viral protein 18-mar-08 2vqp
Title: structure of the matrix protein from human respiratory syncytial virus
Author: v. a. money, h. k. mcphee, j. m. sanderson, r. p. yeo
Keywords: viral matrix protein, peripheral membrane protein, rsv, virion, matrix protein, envelope protein
- 2vtf.pdb.
hydrolase 14-may-08 2vtf
Title: x-ray crystal structure of the endo-beta-n- acetylglucosaminidase from arthrobacter protophormiae e173q mutant reveals a tim barrel catalytic domain and two ancillary domains
Author: z. ling, r. j. bingham, m. d. l. suits, j. w. b. moir, a. j. fairbanks, e. j. taylor
Keywords: family 85, glycosidase, arthrobacter, carbohydrate binding, acetylglucosaminidase
- 2vyc.pdb.
lyase 22-jul-08 2vyc
Title: crystal structure of acid induced arginine decarboxylase from e. coli
Author: j. andrell, m. g. hicks, t. palmer, e. p. carpenter, s. iwata, m. j. maher
Keywords: pyridoxal phosphate, plp-dependent enzyme, lyase, cytoplasm, decarboxylase, acid resistance
- 2vyu.pdb.
choline-binding protein 28-jul-08 2vyu
Title: crystal structure of choline binding protein f from streptococcus pneumoniae in the presence of a peptidoglycan analogue (tetrasaccharide-pentapeptide)
Author: i. perez-dorado, r. molina, j. a. hermoso, s. mobashery
Keywords: cbpf, peptidoglycan, choline-binding-protein, lipid-binding protein
- 2w3r.pdb.
oxidoreductase 14-nov-08 2w3r
Mo Fe Ca
Title: crystal structure of xanthine dehydrogenase (desulfo form) from rhodobacter capsulatus in complex with hypoxanthine
Author: u. dietzel, j. kuper, s. leimkuhler, c. kisker
Keywords: gout, iron, 2fe-2s, xanthine, iron-sulfur, molybdenum cofactor, hypoxanthine, metal-binding, oxidoreductase
- 2w3s.pdb.
oxidoreductase 14-nov-08 2w3s
Mo Fe Ca
Title: crystal structure of xanthine dehydrogenase (desulfo form) from rhodobacter capsulatus in complex with xanthine
Author: u. dietzel, j. kuper, s. leimkuhler, c. kisker
Keywords: xdh, gout, iron, 2fe-2s, xanthine, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine, hyperuricemia, metal-binding
- 2w4x.pdb.
hydrolase 02-dec-08 2w4x
Ca
Title: btgh84 in complex with stz
Author: y. he, a. bubb, c. martinez-fleites, g. j. davies
Keywords: complex, hydrolase, inhibitor, glycosidase
- 2w50.pdb.
hormone 03-dec-08 2w50
Title: n-terminal domain of human conserved dopamine neurotrophic factor (cdnf)
Author: v. parkash, p. lindholm, j. peranen, n. kalkkinen, e. oksanen, m. saarma, v. m. leppanen, a. goldman
Keywords: cdnf, saposin, secreted, er stress, alternative splicing, hormone, growth factor, neurotrophic factor
- 2w51.pdb.
hormone 03-dec-08 2w51
Title: human mesencephalic astrocyte-derived neurotrophic factor ( manf)
Author: v. parkash, p. lindholm, j. peranen, n. kalkkinen, e. oksanen, m. saarma, v. m. leppanen, a. goldman
Keywords: cdnf, saposin, secreted, er stress, phosphoprotein, neurotrophic factor, sialic acid, glycoprotein, growth factor, hormone
- 2w54.pdb.
oxidoreductase 04-dec-08 2w54
Ba Mo Fe
Title: crystal structure of xanthine dehydrogenase from rhodobacter capsulatus in complex with bound inhibitor pterin-6-aldehyde
Author: j. a. doebbler, j. j. truglio, s. leimkuhler, c. kisker
Keywords: xanthine oxidase, purine catabolism, p6a, iron, 2fe-2s, iron-sulfur, metal-binding, molybdenum cofactor
- 2w55.pdb.
oxidoreductase 04-dec-08 2w55
Ba Mo Fe
Title: crystal structure of xanthine dehydrogenase (e232q variant) from rhodobacter capsulatus in complex with hypoxanthine
Author: j. a. doebbler, j. j. truglio, s. leimkuhler, c. kisker
Keywords: gout, iron, 2fe-2s, xanthine, iron-sulfur, molybdenum cofactor, hypoxanthine, metal-binding, oxidoreductase
- 2w8h.pdb.
membrane protein 16-jan-09 2w8h
Cl
Title: crystal structure of spin labeled wza24-345.
Author: g. hagelueken, w. j. ingledew, h. huang, b. petrovic-stojanovska, c. whitfield, h. elmkami, o. schiemann, j. h. naismith
Keywords: membrane protein
- 2w8i.pdb.
membrane protein 16-jan-09 2w8i
Title: crystal structure of wza24-345.
Author: g. hagelueken, w. j. ingledew, h. huang, b. petrovic-stojanovska, c. whitfield, h. elmkami, o. schiemann, j. h. naismith
Keywords: membrane protein
- 2w96.pdb.
cell cycle 21-jan-09 2w96
Title: crystal structure of cdk4 in complex with a d-type cyclin
Author: p. j. day, a. cleasby, i. j. tickle, m. o. reilly, j. e. coyle, f. p. holding, r. l. mcmenamin, j. yon, r. chopra, c. lengauer, h. jhoti
Keywords: oncology, cell cycle, drug desgn
- 2w99.pdb.
cell cycle 22-jan-09 2w99
Title: crystal structure of cdk4 in complex with a d-type cyclin
Author: p. j. day, a. cleasby, i. j. tickle, m. o. reilly, j. e. coyle, f. p. holding, r. l. mcmenamin, j. yon, r. chopra, c. lengauer, h. jhoti
Keywords: oncology, cell cycle, drug desgn
- 2w9f.pdb.
cell cycle 23-jan-09 2w9f
Title: crystal structure of cdk4 in complex with a d-type cyclin
Author: p. j. day, a. cleasby, i. j. tickle, m. o. reilly, j. e. coyle, f. p. holding, r. l. mcmenamin, j. yon, r. chopra, c. lengauer, h. jhoti
Keywords: oncology, cell cycle, drug desgn
- 2w9z.pdb.
transferase 30-jan-09 2w9z
Title: crystal structure of cdk4 in complex with a d-type cyclin
Author: p. j. day, a. cleasby, i. j. tickle, m. o. reilly, j. e. coyle, f. p. holding, r. l. mcmenamin, j. yon, r. chopra, c. lengauer, h. jhoti
Keywords: cyclin dependent kinase, transferase oncology, cell cycle, drug design
- 2waj.pdb.
transferase 08-feb-09 2waj
Cl Br
Title: crystal structure of human jnk3 complexed with a 1-aryl-3,4- dihydroisoquinoline inhibitor
Author: b. d. bax, j. a. christopher, e. j. jones, j. e. mosley
Keywords: epilepsy, cytoplasm, transferase, serine/threonine-protein kinase, chromosomal rearrangement, atp-binding, phosphoprotein, protein kinase, nucleotide-binding, alternative splicing
- 2wb5.pdb.
hydrolase 20-feb-09 2wb5
Cl Na
Title: glcnacstatins are nanomolar inhibitors of human o-glcnacase inducing cellular hyper-o-glcnacylation
Author: h. c. dorfmueller, v. s. borodkin, m. schimpl, d. m. f. van aalten
Keywords: glycosidase, coiled coil
- 2wbf.pdb.
hydrolase 27-feb-09 2wbf
He Cl Hg Ca
Title: crystal structure analysis of sera5e from plasmodium falciparum with loop 690-700 ordered
Author: b. j. smith, r. l. malby, p. m. colman, o. b. clarke
Keywords: sera, malaria, vacuole, protease, cathepsin, hydrolase, plasmodium, glycoprotein, thiol protease
- 2wbr.pdb.
dna-binding protein 03-mar-09 2wbr
He Hg
(solution NMR)
Title: the rrm domain in gw182 proteins contributes to mirna- mediated gene silencing
Author: a. eulalio, f. tritschler, r. buettner, o. weichenrieder, e. izaurralde, v. truffault
Keywords: rrm, rbd, gw182, tnrc6a, mirnas, p-bodies, argonaute, mrna decay
- 2wc0.pdb.
hydrolase/hormone 06-mar-09 2wc0
Zn
Title: crystal structure of human insulin degrading enzyme in complex with iodinated insulin
Author: m. manolopoulou, q. guo, e. malito, a. b. schilling, w. tang
Keywords: metal-binding, cleavage on pair of basic residues
- 2zkl.pdb.
isomerase 25-mar-08 2zkl
Zn
Title: crystal structure of capsular polysaccharide assembling protein capf from staphylococcus aureus
Author: t. miyafusa, y. tanaka, m. yao, i. tanaka, k. tsumoto
Keywords: isomerase
- 2zks.pdb.
hydrolase 28-mar-08 2zks
Title: structural insights into the proteolytic machinery of apoptosis-inducing granzyme m
Author: l. f. wu, l. wang, g. q. hua, k. liu, x. yang, y. j. zhai, f. sun, z. s. fan
Keywords: granzyme, cytolysis, glycoprotein, hydrolase, secreted, zymogen
- 2ztx.pdb.
hydrolase 10-oct-08 2ztx
Zn
Title: complex structure of cvb3 3c protease with epdtc
Author: c. c. lee, a. h. -j. wang
Keywords: hydrolase, protease, thiol protease
- 2zty.pdb.
hydrolase 10-oct-08 2zty
Title: crystal structure of 3c protease from cvb3 in space group c2
Author: c. c. lee, a. h. -j. wang
Keywords: hydrolase, thiol protease
- 2ztz.pdb.
hydrolase 11-oct-08 2ztz
Title: crystal structure of 3c protease from cvb3 in space group p21
Author: c. c. lee, a. h. -j. wang
Keywords: hydrolase, thiol protease
- 2zu1.pdb.
hydrolase 12-oct-08 2zu1
Title: crystal structure of cvb3 3c protease mutant c147a
Author: c. c. lee, y. c. tsui, a. h. -j. wang
Keywords: hydrolase, thiol protease
- 2zu2.pdb.
hydrolase 12-oct-08 2zu2
Zn
Title: complex structure of cov 229e 3cl protease with epdtc
Author: c. c. lee, a. h. -j. wang
Keywords: cytoplasm, hydrolase, membrane, metal-binding, protease, ribosomal frameshifting, rna- binding, thiol protease, transmembrane, zinc, zinc-finger
- 2zu3.pdb.
hydrolase 12-oct-08 2zu3
Title: complex structure of cvb3 3c protease with tg-0204998
Author: c. c. lee, y. c. tsui, a. h. -j. wang
Keywords: hydrolase, protease, thiol protease
- 2zu4.pdb.
hydrolase 12-oct-08 2zu4
Title: complex structure of sars-cov 3cl protease with tg-0204998
Author: m. f. hsu, c. c. lee, a. h. -j. wang
Keywords: hydrolase, protease
- 2zu5.pdb.
hydrolase 12-oct-08 2zu5
Title: complex structure of sars-cov 3cl protease with tg-0205486
Author: m. f. hsu, c. c. lee, a. h. -j. wang
Keywords: hydrolase
- 2zym.pdb.
sugar binding protein 27-jan-09 2zym
Title: crystal structure of cyclo/maltodextrin-binding protein complexed with alpha-cyclodextrin
Author: m. matsumoto, m. yamada, y. kurakata, h. yoshida, s. kamitori, a. nishikawa, t. tonozuka
Keywords: closed form, sugar binding protein
- 2zyn.pdb.
sugar binding protein 27-jan-09 2zyn
Title: crystal structure of cyclo/maltodextrin-binding protein complexed with beta-cyclodextrin
Author: m. matsumoto, m. yamada, y. kurakata, h. yoshida, s. kamitori, a. nishikawa, t. tonozuka
Keywords: closed form, sugar binding protein
- 2zyo.pdb.
sugar binding protein 27-jan-09 2zyo
Title: crystal structure of cyclo/maltodextrin-binding protein complexed with maltotetraose
Author: m. matsumoto, m. yamada, y. kurakata, h. yoshida, s. kamitori, a. nishikawa, t. tonozuka
Keywords: open form, sugar binding protein
- 3bc5.pdb.
transcription 12-nov-07 3bc5
Title: x-ray crystal structure of human ppar gamma with 2-(5-(3-(2- (5-methyl-2-phenyloxazol-4-yl)ethoxy)benzyl)-2-phenyl-2h-1, 2,3-triazol-4-yl)acetic acid
Author: j. k. muckelbauer
Keywords: transcription regulation, zinc, zinc-finger
- 3bdy.pdb.
hormone 15-nov-07 3bdy
Title: dual specific bh1 fab in complex with vegf
Author: j. m. bostrom, c. wiesmann, b. a. appleton
Keywords: acetylation, alternative splicing, angiogenesis, developmental protein, differentiation, glycoprotein, growth factor, heparin-binding, mitogen, secreted, hormone
- 3be1.pdb.
transferase 15-nov-07 3be1
Title: dual specific bh1 fab in complex with the extracellular domain of her2/erbb-2
Author: j. m. bostrom, c. wiesmann, b. a. appleton
Keywords: atp-binding, glycoprotein, kinase, membrane, nucleotide-binding, phosphorylation, polymorphism, receptor, transferase, transmembrane, tyrosine-protein kinase
- 3cbx.pdb.
protein binding 23-feb-08 3cbx
Cl
Title: the dvl2 pdz domain in complex with the c1 inhibitory peptide
Author: b. a. appleton, c. wiesmann
Keywords: phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, wnt signaling pathway, signaling protein, protein binding
- 3cby.pdb.
protein binding 23-feb-08 3cby
Title: the dvl2 pdz domain in complex with the n1 inhibitory peptide
Author: b. a. appleton, c. wiesmann
Keywords: phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, wnt signaling pathway, protein binding
- 3cbz.pdb.
protein binding 23-feb-08 3cbz
Title: the dvl2 pdz domain in complex with the n2 inhibitory peptide
Author: b. a. appleton, c. wiesmann
Keywords: phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, wnt signaling pathway, signaling protein, protein binding
- 3cc0.pdb.
protein binding 23-feb-08 3cc0
Title: the dvl2 pdz domain in complex with the n3 inhibitory peptide
Author: b. a. appleton, c. wiesmann
Keywords: phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, wnt signaling pathway, signaling protein, protein binding
- 3cfi.pdb.
protein transport/immune system 03-mar-08 3cfi
Cl
Title: nanobody-aided structure determination of the epsi:epsj pseudopilin heterdimer from vibrio vulnificus
Author: a. y. lam, e. pardon, k. v. korotkov, j. steyaert, w. g. j. hol
Keywords: pseudopilins, single chain antibody, methylation, protein transport/immune system complex
- 3ch1.pdb.
immune system 06-mar-08 3ch1
Title: crystal structure of h-2db in complex with chimeric gp100
Author: d. badia-martinez, a. achour
Keywords: h-2db, glycoprotein, immune response, membrane, mhc i, transmembrane, immunoglobulin domain, polymorphism, secreted, disease mutation, melanin biosynthesis, immune system
- 3ch8.pdb.
structural protein 08-mar-08 3ch8
Mg
Title: the crystal structure of pdz-fibronectin fusion protein
Author: k. makabe, j. huang, a. koide, s. koide
Keywords: pdz, structural protein
- 3cm9.pdb.
immune system 21-mar-08 3cm9
(solution scattering)
Title: solution structure of human siga2
Author: a. bonner, a. almogren, p. b. furtado, m. a. kerr, s. j. perkins
Keywords: glycoprotein, immunoglobulin c region, immunoglobulin domain, membrane, phosphoprotein, polymorphism, secreted, transmembrane, immune system
- 3cnr.pdb.
unknown function 26-mar-08 3cnr
Se
Title: crystal structure of pilz (xac1133) from xanthomonas axonopodis pv citri
Author: c. r. guzzo, c. s. farah
Keywords: xanthomonas citri, type iv pilus assembly, unknown function
- 3cog.pdb.
lyase 28-mar-08 3cog
Title: crystal structure of human cystathionase (cystathionine gamma lyase) in complex with dl-propargylglycine
Author: r. collins, t. karlberg, l. lehtio, c. h. arrowsmith, h. berglund, l. g. dahlgren, a. m. edwards, s. flodin, a. flores, s. graslund, m. hammarstrom, i. johansson, a. kallas, t. kotenyova, m. moche, m. e. nilsson, p. nordlund, t. nyman, k. olesen, c. persson, h. schuler, l. svensson, a. g. thorsell, l. tresaugues, s. van den berg, j. sagermark, r. d. busam, m. welin, j. weigelt, m. wikstrom, structural genomics consortium (sgc)
Keywords: disease mutation, lyase, phosphoprotein, polymorphism, pyridoxal phosphate
- 3ctc.pdb.
transcription, transferase 11-apr-08 3ctc
Title: tethered pxr-lbd/src-1p
Author: c. a. lesburg
Keywords: transferase
- 3cva.pdb.
apoptosis 18-apr-08 3cva
Title: human bcl-xl containing a trp to ala mutation at position 137
Author: y. feng, l. zhang, t. hu, x. shen, k. chen, h. jiang, d. liu
Keywords: alternative splicing, membrane, mitochondrion, nucleus, transmembrane
- 3cve.pdb.
signaling protein 18-apr-08 3cve
Se
Title: crystal structure of the carboxy terminus of homer1
Author: m. k. hayashi, m. h. stearns, v. giannini, r. -m. xu, c. sala, y. hayashi
Keywords: alternative splicing, cell junction, cytoplasm, membrane, postsynaptic cell membrane, synapse, signaling protein
- 3cvf.pdb.
signaling protein 18-apr-08 3cvf
Se
Title: crystal structure of the carboxy terminus of homer3
Author: m. k. hayashi, m. h. stearns, v. giannini, r. -m. xu, c. sala, y. hayashi
Keywords: alternative splicing, cell junction, cytoplasm, membrane, phosphoprotein, polymorphism, postsynaptic cell membrane, synapse, signaling protein
- 3d38.pdb.
photosynthesis 09-may-08 3d38
Mg Fe
Title: crystal structure of new trigonal form of photosynthetic reaction center from blastochloris viridis. crystals grown in microfluidics by detergent capture
Author: l. li, s. h. m. nachtergaele, a. m. seddon, v. tereshko, n. ponomarenko, r. f. ismagilov, accelerated technologies center for gene to 3d structure (atcg3d)
Keywords: lipoprotein, membrane, metal-binding, photosynthesis, transport, bacteriochlorophyll, chlorophyll, chromophore, formylation, transmembrane, magnesium
- 3d5h.pdb.
protein binding 16-may-08 3d5h
Title: crystal structure of haementhin from haemanthus multiflorus at 2.0a resolution: formation of a novel loop on a tim barrel fold and its functional significance
Author: s. kumar, n. singh, m. sinha, s. b. singh, a. bhushan, p. kaur, a. srinivasan, s. sharma, t. p. singh
Keywords: protein binding
- 3d69.pdb.
immune system 19-may-08 3d69
Title: crystal structure of the fab fragment of an anti-factor ix antibody 10c12
Author: x. l. shi, m. d. huang, t. zeng
Keywords: 10c12, factor ix, gla domain, crystal structure, immune system
- 3dgb.pdb.
isomerase 13-jun-08 3dgb
Mg
Title: crystal structure of muconate lactonizing enzyme from pseudomonas fluorescens complexed with muconolactone
Author: a. a. fedorov, e. v. fedorov, j. m. sauder, s. k. burley, j. a. gerlt, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: muconolactone binding, isomerase, structural genomics, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc
- 3dqr.pdb.
oxidoreductase 09-jul-08 3dqr
Zn Fe
Title: structure of neuronal nos d597n/m336v mutant heme domain in complex with a inhibitor (+-)-n1-{cis-4'-[(6"-aminopyridin- 2"-yl)methyl]pyrrolidin-3'-yl}ethane-1,2-diamine
Author: j. igarashi, h. li, t. l. poulos
Keywords: alternative splicing, calmodulin-binding, cell projection, fad, fmn, heme, iron, membrane, metal-binding, nadp, oxidoreductase
- 3dqs.pdb.
oxidoreductase 09-jul-08 3dqs
Cl Zn Fe As
Title: structure of endothelial nos heme domain in complex with a inhibitor (+-)-n1-{cis-4'-[(6"-amino-4"-methylpyridin-2"- yl)methyl]pyrrolidin-3'-yl}-n2-(4'-chlorobenzyl)ethane-1,2- diamine
Author: j. igarashi, h. li, t. l. poulos
Keywords: phosphoprotein, zinc
- 3dqt.pdb.
oxidoreductase 09-jul-08 3dqt
Cl Zn Fe As
Title: structure of endothelial nos heme domain in complex with a inhibitor (+-)-n1-{trans-4'-[(6"-amino-4"-methylpyridin-2"- yl)methyl]pyrrolidin-3'-yl}-n2-(3'-chlorobenzyl)ethane-1,2- diamine
Author: j. igarashi, h. li, t. l. poulos
Keywords: phosphoprotein, zinc
- 3drf.pdb.
peptide binding protein 11-jul-08 3drf
Title: lactococcal oppa complexed with an endogenous peptide in the closed conformation
Author: r. p. -a. berntsson, m. k. doeven, r. h. duurkens, d. sengupta, s. - j. marrink, a. -m. thunnissen, b. poolman, d. -j. slotboom
Keywords: voluminous binding cavity, venus fly- trap, peptide binding protein
- 3drg.pdb.
peptide binding protein 11-jul-08 3drg
Cl
Title: lactococcal oppa complexed with bradykinin in the closed conformation
Author: r. p. -a. berntsson, m. k. doeven, r. h. duurkens, d. sengupta, s. - j. marrink, a. -m. thunnissen, b. poolman, d. -j. slotboom
Keywords: voluminous binding cavity, venus fly- trap, peptide binding protein
- 3drh.pdb.
peptide binding protein 11-jul-08 3drh
Title: crystal structure of lactococcal oppa co-crystallized with leu-enkephalin in an open conformation
Author: r. p. -a. berntsson, m. k. doeven, r. h. duurkens, d. sengupta, s. - j. marrink, a. -m. thunnissen, b. poolman, d. -j. slotboom
Keywords: voluminous binding cavity, venus fly- trap, peptide binding protein
- 3dri.pdb.
peptide binding protein 11-jul-08 3dri
Title: crystal structure of lactococcal oppa co-crystallized with an octamer peptide in an open conformation
Author: r. p. -a. berntsson, m. k. doeven, r. h. duurkens, d. sengupta, s. - j. marrink, a. -m. thunnissen, b. poolman, d. -j. slotboom
Keywords: voluminous binding cavity, venus fly- trap, peptide binding protein
- 3drj.pdb.
peptide binding protein 11-jul-08 3drj
Title: crystal structure of lactococcal oppa co-crystallized with pth-related peptide in an open conformation
Author: r. p. -a. berntsson, m. k. doeven, r. h. duurkens, d. sengupta, s. - j. marrink, a. -m. thunnissen, b. poolman, d. -j. slotboom
Keywords: voluminous binding cavity, venus fly- trap, peptide binding protein
- 3drk.pdb.
peptide binding protein 11-jul-08 3drk
Title: crystal structure of lactococcal oppa co-crystallized with neuropeptide s in an open conformation
Author: r. p. -a. berntsson, m. k. doeven, r. h. duurkens, d. sengupta, s. - j. marrink, a. -m. thunnissen, b. poolman, d. -j. slotboom
Keywords: voluminous binding cavity, venus fly- trap, peptide binding protein
- 3drm.pdb.
hydrolase inhibitor 11-jul-08 3drm
Title: 2.2 angstrom crystal structure of thr114phe alpha1- antitrypsin
Author: b. gooptu, i. nobeli, a. purkiss, r. l. phillips, m. mallya, d. a. lomas, t. e. barrett
Keywords: disease mutation, glycoprotein, hydrolase, polymorphism, protease, protease inhibitor, secreted, serine protease inhibitor, hydrolase inhibitor
- 3dru.pdb.
hydrolase inhibitor 11-jul-08 3dru
Title: crystal structure of gly117phe alpha1-antitrypsin
Author: b. gooptu, i. nobeli, a. purkiss, r. l. phillips, m. mallya, d. a. lomas, t. e. barrett
Keywords: disease mutation, glycoprotein, hydrolase, polymorphism, protease, protease inhibitor, secreted, serine protease inhibitor, hydrolase inhibitor
- 3dtc.pdb.
transferase 14-jul-08 3dtc
Title: crystal structure of mixed-lineage kinase mlk1 complexed with compound 16
Author: a. a. fedorov, e. v. fedorov, s. l. meyer, r. l. hudkins, s. c. almo
Keywords: transferase
- 3dwn.pdb.
lipid transport 22-jul-08 3dwn
Title: crystal structure of the long-chain fatty acid transporter fadl mutant a77e/s100r
Author: e. m. hearn, d. r. patel, b. w. lepore, m. indic, b. van den berg
Keywords: outer membrane protein, lipid transport, membrane, outer membrane, phage recognition, transmembrane, transport
- 3dwo.pdb.
membrane protein 22-jul-08 3dwo
Title: crystal structure of a pseudomonas aeruginosa fadl homologue
Author: e. m. hearn, d. r. patel, b. w. lepore, m. indic, b. van den berg
Keywords: outer membrane protein
- 3e9y.pdb.
transferase 24-aug-08 3e9y
Mg
Title: arabidopsis thaliana acetohydroxyacid synthase in complex with monosulfuron
Author: l. w. guddat, r. g. duggleby, j. -g. wang, z. -m. li
Keywords: thiamine pyrophosphate, transferase, transit peptide
- 3ea4.pdb.
transferase 24-aug-08 3ea4
Mg
Title: arabidopsis thaliana acetohydroxyacid synthase in complex with monosulfuron-ester
Author: l. w. guddat, j. -g. wang, z. -m. li
Keywords: thiamine pyrophosphate, transferase, transit peptide
- 3efm.pdb.
membrane protein 09-sep-08 3efm
Title: structure of the alcaligin outer membrane recepteur faua from bordetella pertussis
Author: k. brillet, e. lauber, c. reimmann, s. k. armstrong, d. cobessi
Keywords: membrane receptor, membrane transporter, siderophore, membrane, receptor, tonb box
- 3egi.pdb.
transferase 10-sep-08 3egi
Se
Title: methyltransferase domain of human trimethylguanosine synthase tgs1 bound to m7gpppa (inactive form)
Author: t. monecke, a. dickmanns, r. ficner
Keywords: alpha-beta-alpha sandwich, cytoplasm, methyltransferase, nucleus, polymorphism, transcription, transcription regulation, transferase
- 3elp.pdb.
lyase 23-sep-08 3elp
Title: structure of cystationine gamma lyase
Author: q. sun, j. sivaraman
Keywords: alternative splicing, amino-acid biosynthesis, cysteine biosynthesis, cytoplasm, disease mutation, lyase, phosphoprotein, polymorphism, pyridoxal phosphate
- 3ent.pdb.
structural protein 26-sep-08 3ent
Title: crystal structure of nitrollin, a betagamma-crystallin from nitrosospira multiformis-in alternate space group (p65)
Author: p. aravind, r. sankaranarayanan
Keywords: structural protein
- 3enu.pdb.
structural protein 26-sep-08 3enu
Title: crystal structure of nitrollin, a betagamma-crystallin from nitrosospira multiformis
Author: p. aravind, r. sankaranarayanan
Keywords: structural protein
- 3erh.pdb.
oxidoreductase 02-oct-08 3erh
I Fe Ca
Title: first structural evidence of substrate specificity in mammalian peroxidases: crystal structures of substrate complexes with lactoperoxidases from two different species
Author: i. a. sheikh, n. singh, a. k. singh, m. sinha, s. b. singh, a. bhushan, p. kaur, a. srinivasan, s. sharma, t. p. singh
Keywords: complex, heme, oxidoreductase
- 3eri.pdb.
oxidoreductase 02-oct-08 3eri
I Fe Ca
Title: first structural evidence of substrate specificity in mammalian peroxidases: crystal structures of substrate complexes with lactoperoxidases from two different species
Author: a. k. singh, n. singh, i. a. sheikh, m. sinha, a. bhushan, p. kaur, a. srinivasan, s. sharma, t. p. singh
Keywords: complex, heme, oxidoreductase, antibiotic, antimicrobial, calcium, cleavage on pair of basic residues, glycoprotein, hydrogen peroxide, iron, metal-binding, peroxidase, secreted
- 3es5.pdb.
virus 03-oct-08 3es5
Title: crystal structure of partitivirus (psv-f)
Author: j. pan, l. dong, l. lin, w. f. ochoa, r. s. sinkovits, w. m. havens, m. l. nibert, t. s. baker, s. a. ghabrial, y. j. tao
Keywords: rna virus, double stranded rna virus, dsrna virus, t=2, "t=2" capsid, icosahedral virus
- 3eue.pdb.
transferase 09-oct-08 3eue
Mg
Title: crystal structure of ligand-free human uridine phosphorylase 1 (hupp1)
Author: t. p. roosild
Keywords: uridine rescue, alternative splicing, glycosyltransferase, transferase
- 3euf.pdb.
transferase 10-oct-08 3euf
Title: crystal structure of bau-bound human uridine phosphorylase 1
Author: t. p. roosild
Keywords: uridine rescue, 5- benzylacyclouridine, alternative splicing, glycosyltransferase, transferase
- 3ezn.pdb.
isomerase 23-oct-08 3ezn
Title: crystal structure of phosphoglyceromutase from burkholderia pseudomallei 1710b
Author: seattle structural genomics center for infectious disease (ssgcid)
Keywords: phosphoglyceromutase, burkholderia pseudomallei, glycolysis, isomerase, structural genomics, seattle structural genomics center for infectious disease
- 3f7g.pdb.
apoptosis 09-nov-08 3f7g
Zn
Title: structure of the bir domain from ml-iap bound to a peptidomimetic
Author: m. c. franklin, w. j. fairbrother, f. cohen
Keywords: peptide complex, apoptosis inhibition, peptidomimetic, small molecule, drug design, alternative splicing, apoptosis, cytoplasm, metal-binding, nucleus, polymorphism, zinc, zinc-finger
- 3f7h.pdb.
apoptosis 09-nov-08 3f7h
Zn Li
Title: structure of an ml-iap/xiap chimera bound to a peptidomimetic
Author: m. c. franklin, w. j. fairbrother, f. cohen
Keywords: peptide complex, apoptosis inhibition, peptidomimetic, small molecule, drug design, alternative splicing, apoptosis, cytoplasm, metal-binding, nucleus, polymorphism, zinc, zinc-finger
- 3f7i.pdb.
apoptosis 09-nov-08 3f7i
Zn Li
Title: structure of an ml-iap/xiap chimera bound to a peptidomimetic
Author: m. c. franklin, w. j. fairbrother, f. cohen
Keywords: peptide complex, apoptosis inhibition, peptidomimetic, small molecule, drug design, alternative splicing, apoptosis, cytoplasm, metal-binding, nucleus, polymorphism, zinc, zinc-finger
- 3f82.pdb.
transferase 11-nov-08 3f82
Cl F
Title: crystal structure of the tyrosine kinase domain of the hepatocyte growth factor receptor c-met in complex with n- (4-(2-amino-3-chloropyridin-4-yloxy)-3-fluorophenyl)-4- ethoxy-1-(4-fluorophenyl)-2-oxo-1,2-dihydropyridine-3- carboxamide
Author: j. sack
Keywords: receptor tyrosine kinase, signal transduction, grb2, shc, atp-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto- oncogene, transferase, transmembrane, tyrosine-protein kinase
- 3faq.pdb.
oxidoreductase 18-nov-08 3faq
I Fe Ca
Title: crystal struture of lactoperoxidase complex with cyanide
Author: i. a. sheikh, n. singh, s. sharma, p. kaur, a. srinivasan, t. p. singh
Keywords: heme, peroxidase, inhibitor, oxidoreductase
- 3fc3.pdb.
hydrolase/dna 21-nov-08 3fc3
Zn Na
Title: crystal structure of the beta-beta-alpha-me type ii restriction endonuclease hpy99i
Author: m. sokolowska, h. czapinska, m. bochtler
Keywords: restriction enzyme, hpy99i, pseudopalindrome, hydrolase/dna complex
- 3fdy.pdb.
oxidoreductase 26-nov-08 3fdy
Title: pyranose 2-oxidase thermostable triple mutant, t169g/e542k/v546c
Author: t. c. tan, c. divne
Keywords: thermostable, mutant, gmc oxidoreductase, 8-alpha-(n3) histidyl flavinylation, oxidoreductase
- 3fdz.pdb.
isomerase 26-nov-08 3fdz
Title: crystal structure of phosphoglyceromutase from burkholderia pseudomallei 1710b with bound 2,3-diphosphoglyceric acid and 3-phosphoglyceric acid
Author: seattle structural genomics center for infectious disease (ssgcid)
Keywords: ssgcid, phosphoglyceromutase, burkholderia pseudomallei, glycolysis, structural genomics, seattle structural genomics center for infectious disease
- 3ffv.pdb.
protein binding 04-dec-08 3ffv
Title: crystal structure analysis of syd
Author: r. maurus, g. d. brayer
Keywords: translocon, secyeg, syd, nanodisc, cell inner membrane, cell membrane, protein binding
- 3fic.pdb.
ribosome 11-dec-08 3fic
(electron microscopy)
Title: t. thermophilus 70s ribosome in complex with mrna, trnas and ef-tu.gdp.kirromycin ternary complex, fitted to a 6.4 a cryo-em map. this file contains the 30s subunit and the ligands
Author: j. -c. schuette, c. m. t. spahn
Keywords: phosphoprotein, protein biosynthesis
- 3fin.pdb.
ribosome 12-dec-08 3fin
(electron microscopy)
Title: t. thermophilus 70s ribosome in complex with mrna, trnas and ef-tu.gdp.kirromycin ternary complex, fitted to a 6.4 a cryo-em map. this file contains the 50s subunit.
Author: j. -c. schuette, c. m. t. spahn
Keywords: ribosomal protein, metal-binding, rna- binding, rrna-binding, zinc, trna-binding, repressor, translation regulation, methylation, ribosome
- 3fj4.pdb.
isomerase 14-dec-08 3fj4
Mg
Title: crystal structure of muconate lactonizing enzyme from pseudomonas fluorescens complexed with muconolactone
Author: a. a. fedorov, e. v. fedorov, a. sakai, j. a. gerlt, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: cis, cis-muconate, isomerase, structural genomics, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc
- 3flg.pdb.
transferase 18-dec-08 3flg
Title: the pwwp domain of human dna (cytosine-5-)- methyltransferase 3 beta
Author: m. f. amaya, h. zeng, f. mackenzie, j. weigelt, m. sundstrom, c. h. arrowsmith, a. m. edwards, a. botchkarev, j. min, h. wu, structural genomics consortium (sgc)
Keywords: polymorphism, s-adenosyl-l- methionine, transferase, ubl conjugation, zinc, zinc-finger
- 3fmz.pdb.
transport protein 22-dec-08 3fmz
F
Title: crystal structure of retinol-binding protein 4 (rbp4) in complex with non-retinoid ligand
Author: z. wang, s. johnstone, n. p. walker
Keywords: disease mutation, retinol-binding, secreted, sensory transduction, transport, vision, vitamin a, transport protein
- 3fqe.pdb.
transferase 07-jan-09 3fqe
Title: crystal structure of spleen tyrosine kinase complexed with ym193306
Author: a. kuglstatter, a. g. villasenor
Keywords: transferase, tyrosine-protein kinase, ubl conjugation
- 3fqh.pdb.
transferase 07-jan-09 3fqh
Title: crystal structure of spleen tyrosine kinase complexed with a 2-substituted 7-azaindole
Author: a. kuglstatter, a. g. villasenor
Keywords: tyrosine-protein kinase, ubl conjugation
- 3fqk.pdb.
transferase 07-jan-09 3fqk
F
Title: hepatitis c virus polymerase ns5b (bk 1-570) with hcv-796 inhibitor
Author: s. f. harris, a. wong
Keywords: hepatitis, ns5b, transferase, rna-dependent rna polymerase, hcv-796
- 3fql.pdb.
transferase 07-jan-09 3fql
F
Title: hepatitis c virus polymerase ns5b (con1 1-570) with hcv-796 inhibitor
Author: s. f. harris, a. wong
Keywords: hepatitis, ns5b, transferase, rna-dependent rna polymerase, hcv-796
- 3fqs.pdb.
transferase 07-jan-09 3fqs
F
Title: crystal structure of spleen tyrosine kinase complexed with r406
Author: a. kuglstatter, a. g. villasenor
Keywords: sh2 domain, transferase, tyrosine-protein kinase, ubl conjugation
- 3fr2.pdb.
lipid binding protein 08-jan-09 3fr2
Title: n-benzyl-indolo carboxylic acids: design and synthesis of potent and selective adipocyte fatty-acid binding protein (a-fabp) inhibitors
Author: t barf, k. hammer, f. lehmann, s. haile, e. axen, c. medina, l. rondahl, j. uppenberg, s. svensson, t. lundb ck
Keywords: cytoplasm, lipid-binding, nucleus, phosphoprotein, polymorphism, transport, lipid binding protein
- 3fr4.pdb.
lipid binding protein 08-jan-09 3fr4
F
Title: n-benzyl-indolo carboxylic acids: design and synthesis of potent and selective adipocyte fatty-acid binding protein (a-fabp) inhibitors
Author: t. barf, k. hammer, f. lehmann, s. haile, e. axen, c. medina, j. uppenberg, s. svensson, l. rondahl, t. lundb ck
Keywords: cytoplasm, lipid-binding, nucleus, phosphoprotein, polymorphism, transport, lipid binding protein
- 3fr5.pdb.
lipid binding protein 08-jan-09 3fr5
Title: n-benzyl-indolo carboxylic acids: design and synthesis of potent and selective adipocyte fatty-acid binding protein (a-fabp) inhibitors
Author: t. barf, k. hammer, f. lehmann, s. haile, e. axen, c. medina, j. uppenberg, s. svensson, l. rondahl, t. lundb ck
Keywords: cytoplasm, lipid-binding, nucleus, phosphoprotein, polymorphism, transport, lipid binding protein
- 3fs0.pdb.
rna 08-jan-09 3fs0
Mg
Title: class ii ligase ribozyme product-template duplex, structure 2
Author: j. n. pitt, a. r. ferre-d'amare
Keywords: ligase, 2'-5', 2-5, 2p5, rna
- 3fs4.pdb.
oxygen storage, oxygen transport 09-jan-09 3fs4
Fe
Title: crystal structure determination of ostrich hemoglobin at 2.2 angstrom resolution
Author: s. s. sundaresan, p. ramesh, k. sivakumar, m. n. ponnuswamy
Keywords: avian species, ostrich, quaternary structure, heme, iron, metal-binding, oxygen transport, polymorphism, transport, oxygen storage
- 3ftm.pdb.
rna 13-jan-09 3ftm
Mg K
Title: class ii ligase ribozyme product-template duplex, structure 1
Author: j. n. pitt, a. r. ferre-d'amare
Keywords: ligase, 2'-5', 2-5, 2p5, rna
- 3fto.pdb.
peptide binding protein 13-jan-09 3fto
Se
Title: crystal structure of oppa in a open conformation
Author: r. p. -a. berntsson, n. a. oktaviani, f. fusetti, a. - m. w. h. thunnissen, b. poolman, d. -j. slotboom
Keywords: voluminous binding cavity, venus fly- trap, peptide binding protein
- 3fut.pdb.
transferase 14-jan-09 3fut
Se
Title: apo-form of t. thermophilus 16s rrna a1518 and a1519 methyltransferase (ksga) in space group p21212
Author: h. demirci, r. belardinelli, e. seri, s. t. gregory, c. gualerzi, a. e. dahlberg, g. jogl
Keywords: dimethyltransferase, dual-specific methyltransferase, 16s rrna methyltransferase, translation, antibiotic resistance, rna-binding, rrna processing, s- adenosyl-l-methionine, transferase
- 3fuu.pdb.
transferase 14-jan-09 3fuu
Title: t. thermophilus 16s rrna a1518 and a1519 methyltransferase (ksga) in complex with adenosine in space group p212121
Author: h. demirci, r. belardinelli, e. seri, s. t. gregory, c. gualerzi, a. e. dahlberg, g. jogl
Keywords: dimethyltransferase, dual-specific methyltransferase, 16s rrna methyltransferase, translation, antibiotic resistance, rna-binding, rrna processing, s- adenosyl-l-methionine, transferase
- 3fuv.pdb.
transferase 14-jan-09 3fuv
Title: apo-form of t. thermophilus 16s rrna a1518 and a1519 methyltransferase (ksga) in space group p43212
Author: h. demirci, r. belardinelli, e. seri, s. t. gregory, c. gualerzi, a. e. dahlberg, g. jogl
Keywords: dimethyltransferase, dual-specific methyltransferase, 16s rrna methyltransferase, translation, antibiotic resistance, rna-binding, rrna processing, s- adenosyl-l-methionine, transferase
- 3fuw.pdb.
transferase 14-jan-09 3fuw
Title: t. thermophilus 16s rrna a1518 and a1519 methyltransferase (ksga) in complex with 5'-methylthioadenosine in space group p212121
Author: h. demirci, r. belardinelli, e. seri, s. t. gregory, c. gualerzi, a. e. dahlberg, g. jogl
Keywords: dimethyltransferase, dual-specific methyltransferase, 16s rrna methyltransferase, translation, antibiotic resistance, rna-binding, rrna processing, s- adenosyl-l-methionine, transferase
- 3fux.pdb.
transferase 14-jan-09 3fux
Title: t. thermophilus 16s rrna a1518 and a1519 methyltransferase (ksga) in complex with 5'-methylthioadenosine in space group p212121
Author: h. demirci, r. belardinelli, e. seri, s. t. gregory, c. gualerzi, a. e. dahlberg, g. jogl
Keywords: dimethyltransferase, dual-specific methyltransferase, 16s rrna methyltransferase, translation, antibiotic resistance, rna-binding, rrna processing, s- adenosyl-l-methionine, transferase
- 3fwf.pdb.
oxidoreductase 18-jan-09 3fwf
K Fe Se
Title: ferric camphor bound cytochrome p450cam containing a selenocysteine as the 5th heme ligand, monoclinic crystal form
Author: i. schlichting, k. von koenig, c. aldag, d. hilvert
Keywords: hemoprotein, cytochrome p450, cytochrome, heme, iron, metal-binding, monooxygenase, oxidoreductase
- 3fwg.pdb.
oxidoreductase 18-jan-09 3fwg
K Fe
Title: ferric camphor bound cytochrome p450cam, arg365leu, glu366gln, monoclinic crystal form
Author: i. schlichting, k. von koenig, c. aldag, d. hilvert
Keywords: cytochrome p450, cytochrome, heme, iron, metal- binding, monooxygenase, oxidoreductase
- 3fwi.pdb.
oxidoreductase 18-jan-09 3fwi
K Fe Se
Title: ferric camphor bound cytochrome p450cam containing a selenocysteine as the 5th heme ligand, tetragonal crystal form
Author: i. schlichting, k. von koenig, c. aldag, d. hilvert
Keywords: cytochrome p450, selenocysteine, cytochrome, heme, iron, metal-binding, monooxygenase, oxidoreductase
- 3fwj.pdb.
oxidoreductase 18-jan-09 3fwj
K Fe Se
Title: ferric camphor bound cytochrome p450cam containing a selenocysteine as the 5th heme ligand, orthorombic crystal form
Author: i. schlichting, k. von koenig, c. aldag, d. hilvert
Keywords: cytochrome p450, selenocysteine, cytochrome, heme, iron, metal-binding, monooxygenase, oxidoreductase
- 3fwq.pdb.
transferase 19-jan-09 3fwq
Cl
Title: inactive conformation of human protein kinase ck2 catalytic subunit
Author: k. niefind, j. raaf, o. g. issinger
Keywords: protein kinase ck2, eukaryotic protein kinases, inactive conformation, atp-binding, kinase, nucleotide-binding, phosphoprotein, serine/threonine- protein kinase, transferase, wnt signaling pathway
- 3fyp.pdb.
transferase 22-jan-09 3fyp
Cl Mn Na
Title: crystal structure of the quadruple mutant (n23c/c246s/d247e/p249a) of 3-deoxy-d-manno-octulosonate 8- phosphate synthase (kdo8ps) from neisseria meningitidis
Author: g. b. jameson, e. j. parker, f. p. cochrane, m. l. patchett
Keywords: synthase, lipopolysaccharide, kdop, kdo8 kdops, kdo8ps, tim barrel, biosynthesis, transferase, lyase, cytoplasm, lipopolysaccharide biosynthesis
- 3fze.pdb.
protein binding 25-jan-09 3fze
Title: structure of the 'minimal scaffold' (ms) domain of ste5 that cocatalyzes fus3 phosphorylation by ste7
Author: m. c. good, g. tang, j. singleton, a. remenyi, w. a. lim
Keywords: vwa-like fold (scop), cytoplasm, pheromone response, phosphoprotein, protein binding
- 3fzf.pdb.
chaperone 26-jan-09 3fzf
Title: crystal structure of hsc70/bag1 in complex with atp
Author: p. dokurno, d. s. williamson, j. b. murray, a. e. surgenor
Keywords: hsc70, bag1, heat shock, chaperone, protein folding, adenosine, nucleoside, nucleotide exchange factor, small molecule inhibitor, atp-binding, nucleotide-binding, stress response, apoptosis
- 3fzh.pdb.
chaperone 26-jan-09 3fzh
Title: crystal structures of hsc70/bag1 in complex with small molecule inhibitors
Author: p. dokurno, d. s. williamson, j. b. murray, a. e. surgenor
Keywords: hsc70, bag1, heat shock, chaperone, protein folding, adenosine, nucleotide, nucleotide exchange factor, small molecule inhibitor, atp-binding, nucleotide-binding, stress response, apoptosis
- 3fzk.pdb.
chaperone 26-jan-09 3fzk
Cl
Title: crystal structures of hsc70/bag1 in complex with small molecule inhibitors
Author: p. dokurno, d. s. williamson, j. b. murray, a. e. surgenor
Keywords: hsc70, bag1, heat shock, chaperone, protein folding, adenosine, nucleotide, nucleotide exchange factor, small molecule inhibitor, atp-binding, nucleotide-binding, stress response, apoptosis
- 3fzl.pdb.
chaperone 26-jan-09 3fzl
Cl
Title: crystal structures of hsc70/bag1 in complex with small molecule inhibitors
Author: p. dokurno, d. s. williamson, j. b. murray, a. e. surgenor
Keywords: hsc70, bag1, heat shock, chaperone, protein folding, adenosine, nucleotide, nucleotide exchange factor, small molecule inhibitor, atp-binding, nucleotide-binding, stress response, apoptosis
- 3fzm.pdb.
chaperone 26-jan-09 3fzm
Title: crystal structures of hsc70/bag1 in complex with small molecule inhibitors
Author: p. dokurno, d. s. williamson, j. b. murray, a. e. surgenor
Keywords: hsc70, bag1, heat shock, chaperone, protein folding, adenosine, nucleotide, nucleotide exchange factor, small molecule inhibitor, atp-binding, nucleotide-binding, stress response, apoptosis
- 3fzo.pdb.
transferase 26-jan-09 3fzo
Title: crystal structure of pyk2-apo, proline-rich tyrosine kinase
Author: s. han
Keywords: dfg-out, alternative splicing, atp-binding, cell membrane, cytoplasm, kinase, membrane, nucleotide- binding, phosphoprotein, polymorphism, transferase, tyrosine-protein kinase
- 3fzp.pdb.
transferase 26-jan-09 3fzp
Title: crystal structure of pyk2 complexed with atpgs
Author: s. han
Keywords: atpgs, dfg, alternative splicing, atp-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein, polymorphism, transferase, tyrosine-protein kinase
- 3fzr.pdb.
transferase 26-jan-09 3fzr
F
Title: crystal structure of pyk2 complexed with pf-431396
Author: s. han
Keywords: kinase, dfg, alternative splicing, atp-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein, polymorphism, transferase, tyrosine-protein kinase
- 3fzs.pdb.
transferase 26-jan-09 3fzs
Title: crystal structure of pyk2 complexed with birb796
Author: s. han
Keywords: kinase, dfg, alternative splicing, atp-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein, polymorphism, transferase, tyrosine-protein kinase
- 3fzt.pdb.
transferase 26-jan-09 3fzt
Title: crystal structure of pyk2 complexed with pf-4618433
Author: s. han
Keywords: kinase, dfg, alternative splicing, atp-binding, cell membrane, cytoplasm, membrane, nucleotide-binding, phosphoprotein, polymorphism, transferase, tyrosine-protein kinase
- 3g0z.pdb.
hydrolase, gene regulation 29-jan-09 3g0z
Mn Zn
Title: structure of s. pombe pop2p - zn2+ and mn2+ bound form
Author: k. r. andersen, a. t. jonstrup, l. b. van, d. e. brodersen
Keywords: deadenylation, ccr4-not, pop2p, caf1p, dedd exonuclease, hydrolase, gene regulation
- 3g10.pdb.
hydrolase, gene regulation 29-jan-09 3g10
Mg Mn
Title: structure of s. pombe pop2p - mg2+ and mn2+ bound form
Author: k. r. andersen, a. t. jonstrup, l. b. van, d. e. brodersen
Keywords: deadenylation, ccr4-not, pop2p, caf1p, dedd exonuclease, hydrolase, gene regulation
- 3g33.pdb.
cell cycle 01-feb-09 3g33
Title: crystal structure of cdk4/cyclin d3
Author: t. takaki, a. echalier, n. r. brown, t. hunt, j. a. endicott, m. e. m. noble
Keywords: cyclin
- 3g3d.pdb.
lyase 02-feb-09 3g3d
F
Title: crystal structure of human orotidine 5'-monophosphate decarboxylase covalently modified by 5-fluoro-6-azido-ump
Author: y. liu, h. l. tang, a. bello, e. poduch, l. kotra, e. pai
Keywords: phosphoprotein, polymorphism, pyrimidine biosynthesis, transferase
- 3g3m.pdb.
lyase 02-feb-09 3g3m
F
Title: crystal structure of human orotidine 5'-monophosphate decarboxylase covalently modified by 5-fluoro-6-iodo-ump
Author: y. liu, h. l. tang, a. m. bello, e. poduch, l. p. kotra, e. f. pai
Keywords: phosphoprotein, polymorphism, pyrimidine biosynthesis, transferase
- 3gak.pdb.
lyase 17-feb-09 3gak
Zn
Title: structure of giardia fructose-1,6-biphosphate aldolase
Author: a. galkin, o. herzberg
Keywords: 6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target, x-ray structure, glycolysis, lyase
- 3gay.pdb.
lyase 18-feb-09 3gay
Zn
Title: structure of giardia fructose-1,6-biphosphate aldolase in complex with tagatose-1,6-biphosphate
Author: a. galkin, o. herzberg
Keywords: 6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target, x-ray structure, glycolysis, lyase
- 3gb6.pdb.
lyase 18-feb-09 3gb6
Zn
Title: structure of giardia fructose-1,6-biphosphate aldolase d83a mutant in complex with fructose-1,6-bisphosphate
Author: a. galkin, o. herzberg
Keywords: 6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target, x-ray structure, glycolysis, lyase
- 3gb8.pdb.
transport protein 19-feb-09 3gb8
Title: crystal structure of crm1/snurportin-1 complex
Author: x. dong, a. biswas, k. e. suel, l. k. jackson, r. martinez, h. gu, y. m. chook
Keywords: cytoplasm, host-virus interaction, mrna transport, nucleus, phosphoprotein, protein transport, rna-binding, transport, transport protein
- 3gc1.pdb.
oxidoreductase 21-feb-09 3gc1
I Fe Ca
Title: crystal structure of bovine lactoperoxidase
Author: a. k. singh, n. singh, m. sinha, p. kaur, a. srinivasan, s. sharma, t. p. singh
Keywords: heme, oxidoreductase, antibiotic, antimicrobial, calcium, cleavage on pair of basic residues, glycoprotein, hydrogen peroxide, iron, metal-binding, secreted
- 3gcj.pdb.
oxidoreductase 22-feb-09 3gcj
I Fe Ca
Title: mode of ligand binding and assignment of subsites in mammalian peroxidases: crystal structure of lactoperoxidase complexes with acetyl salycylic acid, salicylhydroxamic acid and benzylhydroxamic acid
Author: a. k. singh, n. singh, m. sinha, p. kaur, a. srinivasan, s. sharma, t. p. singh
Keywords: heme, oxidation, oxidoreductase, antibiotic, antimicrobial, calcium, cleavage on pair of basic residues, glycoprotein, hydrogen peroxide, iron, metal-binding, secreted
- 3gck.pdb.
oxidoreductase 22-feb-09 3gck
I Fe Ca
Title: mode of ligand binding and assignment of subsites in mammalian peroxidases: crystal structure of lactoperoxidase complexes with acetyl salycylic acid, salicylhydroxamic acid and benzylhydroxamic acid
Author: a. k. singh, n. singh, m. sinha, a. bhushan, p. kaur, a. srinivasan, s. sharma, t. p. singh
Keywords: heme, oxidation, oxidoreductase, antibiotic, antimicrobial, calcium, cleavage on pair of basic residues, glycoprotein, hydrogen peroxide, iron, metal-binding, secreted
- 3gcl.pdb.
oxidoreductase 22-feb-09 3gcl
I Fe Ca
Title: mode of ligand binding and assignment of subsites in mammalian peroxidases: crystal structure of lactoperoxidase complexes with acetyl salycylic acid, salicylhydroxamic acid and benzylhydroxamic acid
Author: a. k. singh, n. singh, m. sinha, a. bhushan, p. kaur, s. sharma, t. p. singh
Keywords: oxidoreductase, antibiotic, antimicrobial, calcium, cleavage on pair of basic residues, glycoprotein, heme, hydrogen peroxide, iron, metal-binding, secreted
- 3gcn.pdb.
hydrolase/hydrolase activator 22-feb-09 3gcn
Title: crystal structure of degs h198p/d320a mutant modified by dfp in complex with omp peptide (yqf)
Author: j. sohn, r. t. sauer, r. a. grant
Keywords: pdz domain, stress-sensor, htra, omp, hydrolase, periplasm, serine protease, hydrolase/hydrolase activator complex
- 3gco.pdb.
hydrolase/hydrolase activator 22-feb-09 3gco
Title: crystal structure of degs h198p/d320a mutant modified by dfp in complex with dnrdgnvyqf omp peptide
Author: j. sohn, r. a. grant, r. t. sauer
Keywords: stress-sensor, htra, pdz omp, allostery, hydrolase, periplasm, serine protease, hydrolase/hydrolase activator complex
- 3gd8.pdb.
membrane protein 23-feb-09 3gd8
Title: crystal structure of human aquaporin 4 at 1.8 and its mechanism of conductance
Author: j. d. ho, r. yeh, a. sandstrom, i. chorny, w. e. c. harries, r. a. robbins, l. j. w. miercke, r. m. stroud, center for structures of membrane proteins (csmp)
Keywords: transmembrane, transport
- 3gds.pdb.
hydrolase/hydrolase activator 24-feb-09 3gds
Title: crystal structure of degs h198p/d320a mutant modified by dfp in complex with dnrdgnvyyf peptide
Author: j. sohn, r. a. grant, r. t. sauer
Keywords: stress-sensor, htra, pdz omp, hydrolase, periplasm, serine protease, hydrolase/hydrolase activator complex
- 3gdu.pdb.
hydrolase/hydrolase activator 24-feb-09 3gdu
Title: crystal structure of degs h198p/d320a mutant modified by dfp and in complex with yrf peptide
Author: j. sohn, r. a. grant, r. t. sauer
Keywords: stress-sensor, htra, pdz omp, hydrolase, periplasm, serine protease, hydrolase/hydrolase activator complex
- 3gdv.pdb.
hydrolase/hydrolase activator 24-feb-09 3gdv
Title: crystal structure of degs h198p/d320a mutant modified by dfp and in complex with yqf peptide
Author: j. sohn, r. a. grant, r. t. sauer
Keywords: stress-sensor, htra, pdz omp, hydrolase, periplasm, serine protease, hydrolase/hydrolase activator complex
- 3gg4.pdb.
transferase 27-feb-09 3gg4
Se
Title: the crystal structure of glycerol kinase from yersinia pseudotuberculosis
Author: z. zhang, s. swaminathan, s. k. burley, new york sgx research center for structural genomics (nysgxrc)
Keywords: yersinia pseudotuberculosis, structure genomics, 11200d1, kinase, structural genomics, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, transferase
- 3ggd.pdb.
transferase 27-feb-09 3ggd
Cl Co Se
Title: crystal structure of sam-dependent methyltransferase (yp_325210.1) from anabaena variabilis atcc 29413 at 2.11 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: sam-dependent methyltransferase, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
- 3ggg.pdb.
oxidoreductase 27-feb-09 3ggg
Title: the crystal structure of a. aeolicus prephenate dehydrogenase in complex with tyrosine and nad+
Author: w. sun, d. shahinas, d. christendat
Keywords: beta-alpha, tyrosine-bound, nad, oxidoreductase
- 3ggl.pdb.
structural genomics, unknown function 28-feb-09 3ggl
Zn Se
Title: x-ray structure of the c-terminal domain (277-440) of putative chitobiase from bacteroides thetaiotaomicron. northeast structural genomics consortium target btr324a.
Author: a. kuzin, h. neely, r. seetharaman, d. lee, c. ciccosanti, e. l. foote, h. janjua, r. xiao, r. nair, b. rost, t. acton, j. k. everett, g. t. montelione, l. tong, j. hunt, northeast structural genomics consortium (nesg)
Keywords: unknown function
- 3ggo.pdb.
oxidoreductase 01-mar-09 3ggo
Title: crystal structure of prephenate dehydrogenase from a. aeolicus with hpp and nadh
Author: w. sun, d. shahinas, d. christendat
Keywords: hpp, nadh, alpha-beta, oxidoreductase
- 3ggp.pdb.
oxidoreductase 01-mar-09 3ggp
Cl
Title: crystal structure of prephenate dehydrogenase from a. aeolicus in complex with hydroxyphenyl propionate and nad+
Author: w. sun, d. shahinas, m. s. kimber, d. christendat
Keywords: tyra, prephenate dehydrogenase, alpha-beta, oxidoreductase
- 3ggw.pdb.
immune system 02-mar-09 3ggw
Title: crystal structure of fab f22-4 in complex with a carbohydrate-mimetic peptide
Author: f. a. saul, b. vulliez-le normand, g. a. bentley
Keywords: lps, shigella flexneri, antibody complex, immune system
- 3ghd.pdb.
nucleotide binding protein, metal bindin03-mar-09 3ghd
Se
Title: crystal structure of a cystathionine beta-synthase domain protein fused to a zn-ribbon-like domain
Author: a. dong, x. xu, m. chruszcz, g. brown, m. proudfoot, a. m. edwards, a. joachimiak, w. minor, a. savchenko, a. yaleunin, midwest center for structural genomics (mcsg)
Keywords: metal binding protein
- 3gi7.pdb.
structural genomics, unknown function 05-mar-09 3gi7
Se
Title: crystal structure of secreted protein of unknown function (duf1311) (np_742474.1) from pseudomonas putida kt2440 at 1.85 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: secreted protein of unknown function (duf1311), structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, unknown function
- 3gku.pdb.
rna binding protein 11-mar-09 3gku
Se
Title: crystal structure of a probable rna-binding protein from clostridium symbiosum atcc 14940
Author: k. tan, l. keigher, r. jedrzejczak, g. babnigg, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: rna-binding protein, clostridium symbiosum atcc 14940, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, rna binding protein
- 3gl3.pdb.
oxidoreductase 11-mar-09 3gl3
Se
Title: crystal structure of a putative thiol:disulfide interchange protein dsbe from chlorobium tepidum
Author: l. damodharan, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: new york structural genomix research consortium
- 3gl5.pdb.
structural genomics, unknown function 11-mar-09 3gl5
Na Se
Title: crystal structure of probable dsba oxidoreductase sco1869 from streptomyces coelicolor
Author: c. chang, x. xu, h. cui, a. savchenko, a. m. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: probable dsba oxidoreductase sco1869, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
- 3gm8.pdb.
hydrolase 13-mar-09 3gm8
Title: crystal structure of a beta-glycosidase from bacteroides vulgatus
Author: j. b. bonanno, m. rutter, k. t. bain, m. iizuka, s. ozyurt, s. wasserman, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: hydrolase, glycosidase, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc
- 3gmu.pdb.
protein binding 15-mar-09 3gmu
Title: crystal structure of beta-lactamse inhibitory protein (blip) in apo form
Author: n. c. j. strynadka, m. gretes, m. n. g. james
Keywords: disulfide bond, secreted, protein binding
- 3gmv.pdb.
protein binding 15-mar-09 3gmv
Title: crystal structure of beta-lactamse inhibitory protein-i (blip-i) in apo form
Author: d. c. lim, m. gretes, n. c. j. strynadka
Keywords: protein binding
- 3gmw.pdb.
protein binding 15-mar-09 3gmw
Title: crystal structure of beta-lactamse inhibitory protein-i (blip-i) in complex with tem-1 beta-lactamase
Author: d. c. lim, m. gretes, n. c. j. strynadka
Keywords: antibiotic resistance, hydrolase, plasmid, protein binding
- 3gmx.pdb.
protein binding 15-mar-09 3gmx
Title: crystal structure of beta-lactamse inhibitory protein-like protein (blp) at 1.05 angstrom resolution
Author: m. gretes, n. c. j. strynadka
Keywords: protein binding
- 3gmy.pdb.
protein binding 15-mar-09 3gmy
Se
Title: crystal structure of beta-lactamse inhibitory protein-like protein (blp), selenomethionine derivative
Author: m. gretes, n. c. j. strynadka
Keywords: protein binding
- 3gn3.pdb.
structural genomics, unknown function 16-mar-09 3gn3
Title: crystal structure of a putative protein-disulfide isomerase from pseudomonas syringae to 2.5a resolution.
Author: a. j. stein, g. chhor, l. freeman, a. joachimiak, midwest center for structural genomics (mcsg)
Keywords: isomerase, pseudomonas, mcsg, psi, structural genomics, protein structure initiative, midwest center for structural genomics, unknown function
- 3gn6.pdb.
structural genomics, unknown function 16-mar-09 3gn6
Mg Se
Title: crystal structure of ct0912, orfan protein from chlorobium tepidum with a ferrodoxin-like domain repeat (np_661805.1) from chlorobium tepidum tls at 1.80 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: unknown function
- 3gnh.pdb.
hydrolase 17-mar-09 3gnh
Zn
Title: crystal structure of l-lysine, l-arginine carboxypeptidase cc2672 from caulobacter crescentus cb15 complexed with n- methyl phosphonate derivative of l-arginine.
Author: a. a. fedorov, e. v. fedorov, d. f. xiang, f. m. raushel, s. c. almo
Keywords: l-arginine carboxypeptidase cc2672, caulobacter crescentus cb15, n-methyl phosphonate derivative of l- arginine, hydrolase
- 3gnk.pdb.
dna 17-mar-09 3gnk
Na Ca
Title: calcium bound to the holliday junction sequence d(tcggcgccga)4
Author: a. naseer, c. j. cardin
Keywords: dna
- 3gnn.pdb.
transferase 17-mar-09 3gnn
Title: crystal structure of nicotinate-nucleotide pyrophosphorylase from burkholderi pseudomallei
Author: seattle structural genomics center for infectious disease (ssgcid)
Keywords: ssgcid, niaid, sbri, uwppg, glycosyltransferase, transferase, structural genomics, seattle structural genomics center for infectious disease
- 3go2.pdb.
isomerase 18-mar-09 3go2
Mg
Title: crystal structure of putative l-alanine-dl-glutamate epimerase from burkholderia xenovorans strain lb400 bound to magnesium
Author: j. b. bonanno, m. dickey, k. t. bain, s. chang, s. ozyurt, s. wasserman, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
Keywords: isomerase, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc
- 3go3.pdb.
dna 18-mar-09 3go3
Mn
Title: interactions of an echinomycin-dna complex with manganese(ii) ions
Author: r. pfoh, j. a. cuesta-seijo, g. m. sheldrick
Keywords: manganese ions, echinomycin
- 3goa.pdb.
transferase 18-mar-09 3goa
Cl Na Ca Se
Title: crystal structure of the salmonella typhimurium fada 3- ketoacyl-coa thiolase
Author: s. m. anderson, t. skarina, o. onopriyenko, z. wawrzak, l. papazisi, a. savchenko, w. f. anderson, center for structural genomics of infectious diseases (csgid)
Keywords: center for structural genomics of infectious diseases, csgid
- 3goc.pdb.
hydrolase 18-mar-09 3goc
Cl Mg
Title: crystal structure of the endonuclease v (sav1684) from streptomyces avermitilis. northeast structural genomics consortium target svr196
Author: f. forouhar, m. abashidze, m. hussain, j. seetharaman, f. fang, r. xiao, k. cunningham, l. ma, l. owens, c. x. chen, j. k. everett, r. nair, t. b. acton, b. rost, g. t. montelione, l. tong, j. f. hunt, northeast structural genomics consortium (nesg)
Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, cytoplasm, dna damage, dna repair, endonuclease, hydrolase, magnesium, nuclease
- 3goh.pdb.
oxidoreductase 19-mar-09 3goh
Se
Title: crystal structure of alcohol dehydrogenase superfamily protein (np_718042.1) from shewanella oneidensis at 1.55 a resolution
Author: joint center for structural genomics (jcsg)
Keywords: alcohol dehydrogenase superfamily protein, alcohol dehydrogenase groes-like domain, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, oxidoreductas...
- 3goz.pdb.
structural genomics, unknown function 20-mar-09 3goz
Se
Title: crystal structure of the leucine-rich repeat-containing protein legl7 from legionella pneumophila. northeast structural genomics consortium target lgr148
Author: s. m. vorobiev, m. abashidze, j. seetharaman, r. l. belote, e. l. foote, c. ciccosanti, h. janjua, r. xiao, t. b. acton, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
Keywords: legl7, nesg, lgr148, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, unknown function
- 3gp3.pdb.
isomerase 20-mar-09 3gp3
Title: crystal structure of phosphoglyceromutase from burkholderia pseudomallei with 2-phosphoserine
Author: seattle structural genomics center for infectious disease (ssgcid)
Keywords: decode, sbri, niaid, uwppg, glycolysis, isomerase, structural genomics, seattle structural genomics center for infectious disease, ssgcid
- 3gp5.pdb.
isomerase 20-mar-09 3gp5
V
Title: crystal structure of phosphoglyceromutase from burkholderia pseudomallei with 3-phosphoglyceric acid and vanadate
Author: seattle structural genomics center for infectious disease (ssgcid)
Keywords: decode, uwppg. sbri, niaid, ssgcid, glycolysis, isomerase, structural genomics, seattle structural genomics center for infectious disease
- 3gpk.pdb.
isomerase 23-mar-09 3gpk
Se
Title: crystal structure of ppic-type peptidyl-prolyl cis-trans isomerase domain at 1.55a resolution.
Author: l. satyanarayana, s. eswaramoorthy, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
Keywords: rotamase,ppiase domain, nysgxrc,11189o3,psi2., structural genomics, protein structure initiative, new york sgx research center for structural genomics, chaperone, isomerase
- 3prc.pdb.
photosynthetic reaction center 29-jul-97 3prc
Mg Fe
Title: photosynthetic reaction center from rhodopseudomonas viridis (qb-depleted)
Author: c. r. d. lancaster, h. michel
Keywords: secondary quinone (qb)- depleted
- 5prc.pdb.
photosynthetic reaction center 01-aug-97 5prc
Cl Mg Fe
Title: photosynthetic reaction center from rhodopseudomonas viridis (atrazine complex)
Author: c. r. d. lancaster, h. michel
Keywords: secondary quinone (qb), triazine
- 6prc.pdb.
photosynthetic reaction center 31-jul-97 6prc
Cl Mg Fe
Title: photosynthetic reaction center from rhodopseudomonas viridis (dg-420314 (triazine) complex)
Author: c. r. d. lancaster, h. michel
Keywords: secondary quinone (qb)
- 7prc.pdb.
photosynthetic reaction center 01-aug-97 7prc
Cl Mg Fe
Title: photosynthetic reaction center from rhodopseudomonas viridis (dg-420315 (triazine) complex)
Author: c. r. d. lancaster, h. michel
Keywords: secondary quinone (qb), triazine inhibitor
View back issues.
Metalloprotein Structure and Design project home page:
www.scripps.edu/research/metallo
Computational Center for Macromolecular Structure home page:
www.sdsc.edu/CCMS