Recent PDB releases or updates: week of 13 February 2009

• 1nav.pdb. membrane protein 29-nov-02 1nav
  Title: thyroid receptor alpha in complex with an agonist selective for thyroid receptor beta1
  Author: l. ye, y. l. li, k. mellstrom, c. mellin, l. g. bladh, k. koehler, n. garg, a. m. garcia collazo, c. litten, b. husman, k. persson, j. ljunggren, g. grover, p. g. sleph, r. george, j. malm
  Keywords: thyroid receptor, ligand, complex
  
• 1nax.pdb. membrane protein 29-nov-02 1nax
  Title: thyroid receptor beta1 in complex with a beta-selective ligand
  Author: l. ye, y. l. li, k. mellstrom, c. mellin, l. g. bladh, k. koehler, n. garg, a. m. garcia collazo, c. litten, b. husman, k. persson, j. ljunggren, g. grover, p. g. sleph, r. george, j. malm
  Keywords: thyroid receptor, complex
  
• 1ni9.pdb. structural genomics, unknown function 23-dec-02 1ni9
  Title: 2.0 a structure of glycerol metabolism protein from e. coli
  Author: r. sanishvili, j. brunzelle, a. savchenko, a. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: two domain structure of two alpha/beta folds, extended beta sheets, psi, protein structure initiative, midwest center for structural genomics, mcsg
  
• 1xkf.pdb. unknown function 28-sep-04 1xkf Zn
  Title: crystal structure of hypoxic response protein i (hrpi) with two coordinated zinc ions
  Author: m. l. sharpe, e. n. baker, j. s. lott
  
  
• 1y5h.pdb. unknown function 02-dec-04 1y5h Se
  Title: crystal structure of truncated se-met hypoxic response protein i (hrpi)
  Author: m. l. sharpe, e. n. baker, j. s. lott
  
  
• 2axt.pdb. electron transport 06-sep-05 2axt Mg Mn Nd Ne Fe Ca
  Title: crystal structure of photosystem ii from thermosynechococcus elongatus
  Author: b. loll, j. kern, w. saenger, a. zouni, j. biesiadka
  Keywords: ps ii, ps2, membrane complex, transmembrane alpha-helix
  
• 2e5s.pdb. transcription 22-dec-06 2e5s He Hg Zn (NMR, 20 structures)
  Title: solution structure of the zf-ccchx2 domain of muscleblind- like 2, isoform 1 [homo sapiens]
  Author: w. dang, y. muto, m. inoue, t. kigawa, m. shirouzu, t. terada, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: transcription
  
• 2hih.pdb. hydrolase 29-jun-06 2hih Zn Ca
  Title: crystal structure of staphylococcus hyicus lipase
  Author: j. j. w. tiesinga, g. van pouderoyen, m. nardini, b. w. dijkstra
  Keywords: a1 phospholipase, phospholipid binding
  
• 2jdl.pdb. hydrolase 11-jan-07 2jdl
  Title: structure of c-terminal region of acidic p2 ribosomal protein complexed with trichosanthin
  Author: h. m. too, n. s. mak, g. zhu, w. n. au, k. b. wong, p. c. shaw
  Keywords: ribosomal protein, protein synthesis inhibitor, toxin, hydrolase, plant defense, antiviral protein
  
• 2jjr.pdb. hydrolase 21-apr-08 2jjr
  Title: v232k, n236d-trichosanthin
  Author: p. h. too, m. k. ma, a. n. mak, c. k. tung, g. zhu, s. w. au, k. b. wong, p. c. shaw
  Keywords: protein synthesis inhibitor, tcs, toxin, hydrolase, plant defense
  
• 2jxg.pdb. dna binding protein 19-nov-07 2jxg He Hg (NMR, minimized average structure)
  Title: solution structure of the dna binding domain of proline utilization a (puta)
  Author: s. halouska, y. zhou, d. becker, r. powers
  Keywords: proline, utilization, dna, binding, dna binding protein
  
• 2jxh.pdb. dna binding protein 19-nov-07 2jxh He Hg (solution NMR)
  Title: solution structure of dna binding domain of proline utilization a (puta) for psuedomonas putida
  Author: s. halouska, y. zhou, d. becker, r. powers
  Keywords: proline, utilization, dna, binding, dna binding protein
  
• 2jxi.pdb. dna binding protein, dna 19-nov-07 2jxi He Ho (solution NMR)
  Title: solution structure of the dna-binding domain of pseudomonas putida proline utilization a (puta) bound to gttgca dna sequence
  Author: s. halouska, y. zhou, d. becker, r. powers
  Keywords: proline, utilization, dna, binding, dna binding protein
  
• 2k0g.pdb. membrane protein 02-feb-08 2k0g He Hg Ho (solution NMR)
  Title: solution structure of a bacterial cyclic nucleotide- activated k+ channel binding domain in complex with camp
  Author: s. schunke, m. stoldt, d. willbold
  Keywords: ion channel, helical bundle beta barrel core, phosphate binding cassette with camp bound, cyclic nucleotide binding domain, solution structure
  
• 2k3j.pdb. oxidoreductase 08-may-08 2k3j He Hg (solution NMR)
  Title: the solution structure of human mia40
  Author: s. ciofi baffoni, i. bertini, a. gallo
  Keywords: coiled coil-helix-coiled coil-helix domain, mitochondrial oxidase, protein import and folding, alternative splicing, mitochondrion, protein transport, translocation, transport, oxidoreductase
  
• 2k4w.pdb. oxidoreductase 20-jun-08 2k4w He Hg Cu Zn (solution NMR)
  Title: the solution structure of the monomeric copper, zinc superoxide dismutase from salmonella enterica
  Author: m. mori, b. jimenez, m. piccioli, a. battistoni, m. sette, structural proteomics in europe (spine)
  Keywords: national project on protein structural and functional analyses, structural proteomics in europe, spine
  
• 2k7g.pdb. plant protein 10-aug-08 2k7g Hg (solution NMR)
  Title: solution structure of varv f
  Author: c. k. wang
  Keywords: cystine knot, knottin, plant defense, plant protein
  
• 2k8o.pdb. cell adhesion 17-sep-08 2k8o He Hg (solution NMR)
  Title: solution structure of integrin alpha l
  Author: a. bhunia, s. bhattacharjya, s. tan
  Keywords: alpha l, beta 2, beta 3, alternative splicing, calcium, cell adhesion, glycoprotein, magnesium, membrane, polymorphism, receptor, transmembrane
  
• 2k98.pdb. antimicrobial protein 30-sep-08 2k98 Hg (solution NMR)
  Title: helical hairpin structure of potent antimicrobial peptide msi-594 in the presence of lipopolysaccharide micelle
  Author: a. bhunia, s. bhattacharjya, a. ramamoorthy
  Keywords: nmr, lps, trnoe, antimicrobial peptide, antimicrobial protein
  
• 2kal.pdb. dna 09-nov-08 2kal Ho (solution NMR)
  Title: nmr structure of fully methylated gatc site
  Author: j. bang, s. bae, c. park, j. lee, b. choi
  Keywords: n6-methylated adenine, dna
  
• 2kbm.pdb. metal binding protein 02-dec-08 2kbm He Hg Ca (solution NMR)
  Title: ca-s100a1 interacting with trtk12
  Author: n. t. wright, k. m. varney, b. r. cannon, m. morgan, d. j. weber
  Keywords: ef-hand, protein-protein interaction, conformational change, capz, acetylation, actin capping, actin-binding, calcium, cytoplasm, metal-binding, zinc, metal binding protein
  
• 2kcd.pdb. structural genomics, unknown function 19-dec-08 2kcd He Hg (solution NMR)
  Title: solution nmr structure of ssp0047 from staphylococcus saprophyticus. northeast structural genomics consortium target syr6.
  Author: t. a. ramelot, k. ding, c. x. chen, m. jiang, c. ciccosanti, r. xiao, j. liu, m. c. baran, g. swapna, t. b. acton, b. rost, g. t. montelione, m. a. kennedy, northeast structural genomics consortium (nesg)
  Keywords: structural genomics, unknown function, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
  
• 2kci.pdb. structural genomics, unknown function 22-dec-08 2kci He Hg (solution NMR)
  Title: solution nmr structure of gmet_2339 from geobacter metallireducens. northeast structural genomics consortium target gmr141
  Author: m. j. smola, t. a. ramelot, l. zhao, k. hamilton, e. l. foote, r. xiao, r. nair, j. k. everett, g. swapna, t. b. acton, b. rost, g. t. montelione, m. a. kennedy, northeast structural genomics consortium (nesg)
  Keywords: acp, pcp, structural genomics, unknown function, psi- 2, protein structure initiative, northeast structural genomics consortium, nesg
  
• 2kcm.pdb. nucleic acid binding protein 23-dec-08 2kcm He Hg (solution NMR)
  Title: solution nmr structure of the n-terminal ob-domain of so_1732 from shewanella oneidensis. northeast structural genomics consortium target sor210a.
  Author: t. a. ramelot, m. maglaqui, m. jiang, c. ciccosanti, r. xiao, j. lui, j. k. everett, g. swapna, t. b. acton, b. rost, g. t. montelione, m. a. kennedy, northeast structural genomics consortium (nesg)
  Keywords: beta barrel, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg
  
• 2kct.pdb. chaperone 29-dec-08 2kct He Hg (solution NMR)
  Title: solution nmr structure of the ob-fold domain of heme chaperone ccme from desulfovibrio vulgaris. northeast structural genomics target dvr115g.
  Author: j. m. aramini, p. rossi, h. lee, a. lemak, h. wang, e. l. foote, m. jiang, r. xiao, r. nair, g. v. t. swapna, t. b. acton, b. rost, j. k. everett, g. t. montelione, northeast structural genomics consortium (nesg)
  Keywords: heme chaperone, cytochrome c biogenesis, ob-fold domain, nesg, psi-2, structural genomics, protein structure initiative, northeast structural genomics consortium, biosynthetic protein
  
• 2kd0.pdb. signaling protein 31-dec-08 2kd0 He Hg (solution NMR)
  Title: nmr solution structure of o64736 protein from arabidopsis thaliana. northeast structural genomics consortium mega target ar3445a
  Author: g. v. t. swapna, r. shastry, e. foote, c. ciccosanti, m. jiang, r. xiao, r. nair, j. everett, y. huang, t. b. acton, b. rost, g. t. montelione, northeast structural genomics consortium (nesg)
  Keywords: nesg, ar3445a, leucine-rich repeat, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, signaling protein
  
• 2kd2.pdb. apoptosis 01-jan-09 2kd2 He Hg (solution NMR)
  Title: nmr structure of faim-ctd
  Author: m. hemond, g. wagner
  Keywords: beta sandwich, apoptosis
  
• 2kd3.pdb. protein binding 02-jan-09 2kd3 He Hg (solution NMR)
  Title: nmr structure of the wnt modulator protein sclerostin
  Author: s. e. weidauer, t. d. mueller
  Keywords: antagonist of cytokine, protein binding
  
• 2kdb.pdb. protein binding 06-jan-09 2kdb He Hg (solution NMR)
  Title: solution structure of human ubiquitin-like domain of herpud2_9_85, northeast structural genomics consortium (nesg) target ht53a
  Author: b. wu, a. yee, c. fares, a. lemak, a. gutmanas, r. doherty, a. semesi, s. dhe-paganon, c. arrowsmith, northeast structural genomics consortium (nesg), ontario centre for structural proteomics (ocsp)
  Keywords: ontario centre for structural proteomics, ocsp, unknown function, protein binding
  
• 2ken.pdb. structural genomics, unknown function 30-jan-09 2ken He Hg (solution NMR)
  Title: solution nmr structure of the ob domain (residues 67-166) of mm0293 from methanosarcina mazei. northeast structural genomics consortium target mar214a.
  Author: t. a. ramelot, k. ding, m. magliqui, m. jiang, c. ciccosanti, r. xiao, j. lui, j. k. everett, g. swapna, t. b. acton, b. rost, g. t. montelione, m. a. kennedy, northeast structural genomics consortium (nesg)
  Keywords: beta barrel, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, nesg, unknown function
  
• 2o1o.pdb. structural genomics, unknown function 29-nov-06 2o1o Mg
  Title: cryptosporidium parvum putative polyprenyl pyrophosphate synthase (cgd4_2550) in complex with risedronate.
  Author: m. chruszcz, j. d. artz, a. dong, j. dunford, j. lew, y. zhao, i. kozieradski, k. l. kavanaugh, u. oppermann, m. sundstrom, j. weigelt, a. m. edwards, c. h. arrowsmith, a. bochkarev, r. hui, w. minor, sgc, structural genomics consortium (sgc)
  Keywords: structural genomics, structural genomics consortium, sgc
  
• 2opu.pdb. rna binding protein 30-jan-07 2opu He Hg (NMR, 25 structures)
  Title: solution nmr structure of the first domain of ksrp
  Author: i. diaz-moreno, a. ramos, m. f. garcia-mayoral, d. hollingworth
  Keywords: rna binding protein, ksrp
  
• 2q58.pdb. transferase 31-may-07 2q58 Mg
  Title: cryptosporidium parvum putative polyprenyl pyrophosphate synthase (cgd4_2550) in complex with zoledronate
  Author: m. chruszcz, j. artz, h. zheng, a. dong, j. dunford, j. lew, y. zhao, i. kozieradski, k. l. kavanaugh, u. opperman, m. sundstrom, j. weigelt, a. edwards, c. arrowsmith, a. bochkarev, r. hui, w. minor, structural genomics consortium (sgc)
  Keywords: structural genomics, structural genomics consortium, sgc
  
• 2rok.pdb. rna binding protein 28-mar-08 2rok He Hg Ho (solution NMR)
  Title: solution structure of the cap-binding domain of parn complexed with the cap analog
  Author: t. nagata, s. suzuki, r. endo, m. shirouzu, t. terada, m. inoue, t. kigawa, p. guntert, y. hayashizaki, y. muto, s. yokoyama, riken structural genomics/proteomics initiative (rsgi)
  Keywords: rbd, cap, structural genomics, rna binding protein, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi
  
• 2v1x.pdb. hydrolase 30-may-07 2v1x Cl Mg Zn
  Title: crystal structure of human recq-like dna helicase
  Author: a. c. w. pike, b. shrestha, n. burgess-brown, o. king, e. ugochukwu, s. watt, a. edwards, c. h. arrowsmith, j. weigelt, m. sundstrom, o. gileadi
  Keywords: mismatch repair, nucleotide-binding, dna-binding, polymorphism, nuclear protein, atpase, helicase, hydrolase, atp-binding
  
• 2vhk.pdb. plant protein 21-nov-07 2vhk
  Title: atomic resolution (0.94 a) structure of purified thaumatin i grown in sodium l-tartrate at 22c
  Author: j. jakoncic, n. asherie, c. ginsberg
  Keywords: crystallization, l-tartaric acid, purified protein, thaumatin, chirality, temperature, microbatch, plant protein, sweet protein
  
• 2vhr.pdb. plant protein 24-nov-07 2vhr
  Title: atomic resolution (0.95a) structure of purified thaumatin i grown in sodium l-tartrate at 4 c
  Author: j. jakoncic, n. asherie, c. ginsberg
  Keywords: sweet protein, crystallization, l-tartaric acid, thaumatin, chirality, microbatch, temperature, purified protein, plant protein
  
• 2vi1.pdb. plant protein 26-nov-07 2vi1
  Title: atomic resolution (1.04 a) structure of purified thaumatin i grown in sodium d-tartrate at 22 c.
  Author: j. jakoncic, n. asherie, c. ginsberg
  Keywords: sweet protein, crystallization, d-tartaric acid, thaumatin, chirality, microbatch, temperature, purified protein, plant protein
  
• 2vi2.pdb. plant protein 26-nov-07 2vi2
  Title: atomic resolution (1.05 a) structure of purified thaumatin i grown in sodium d-tartrate at 4c
  Author: j. jakoncic, n. asherie, c. ginsberg
  Keywords: sweet protein, crystallization, d-tartaric acid, thaumatin, chirality, microbatch, temperature, purified protein, plant protein
  
• 2vi3.pdb. plant protein 26-nov-07 2vi3
  Title: atomic resolution (0.98 a) structure of purified thaumatin i grown in sodium dl-tartrate at 20 c
  Author: j. jakoncic, n. asherie, c. ginsberg
  Keywords: sweet protein, crystallization, dl-tartaric acid, thaumatin, chirality, microbatch, temperature, purified protein, plant protein
  
• 2vi4.pdb. plant protein 26-nov-07 2vi4
  Title: atomic resolution (1.10 a) structure of purified thaumatin i grown in sodium dl-tartrate at 6 c.
  Author: j. jakoncic, n. asherie, c. ginsberg
  Keywords: sweet protein, crystallization, dl-tartaric acid, thaumatin, chirality, microbatch, temperature, purified protein, plant protein
  
• 2vk3.pdb. protein-binding 17-dec-07 2vk3
  Title: crystal structure of rat profilin 2a
  Author: t. haikarainen, p. kursula
  Keywords: cytoplasm, acetylation, cytoskeleton, actin-binding, disulfide bridge, alternative splicing, protein-binding
  
• 2vky.pdb. viral protein 04-jan-08 2vky
  Title: headbinding domain of phage p22 tailspike c-terminally fused to isoleucine zipper piigcn4 (chimera i)
  Author: a. seul, j. j. mueller, g. mueller, u. heinemann, r. seckler
  Keywords: phage p22 tailspike, chimera, hydrolase, late protein, isoleucine zipper piigcn4, viral protein
  
• 2vlc.pdb. hydrolase 11-jan-08 2vlc
  Title: crystal structure of natural cinnamomin (isoform iii)
  Author: a. azzi, t. wang, d. -w. zhu, y. -s. zou, w. -y. liu, s. -x. lin
  Keywords: toxin, hydrolase, cinnamomin, plant defense, n-glycosidase, protein synthesis inhibitor
  
• 2vlx.pdb. oxygen transport 20-jan-08 2vlx Fe
  Title: crystal structure of peroxymyoglobin generated by cryoradiolytic reduction of myoglobin compound iii
  Author: h. -p. hersleth, c. h. gorbitz, k. k. andersson
  Keywords: iron, heme, ferryl, transport, peroxidase, oxygen transport, oxygen activation, radiolytic- reduction, reaction intermediate, monooxygenase, metal-binding, muscle protein, x-ray-induced-photoreductio...
  
• 2vma.pdb. transport protein 25-jan-08 2vma I Ca Se
  Title: the three-dimensional structure of the cytoplasmic domains of epsf from the type 2 secretion system of vibrio cholerae
  Author: j. abendroth, k. v. korotkov, d. d. mitchell, a. kreger, w. g. j. hol
  Keywords: inner membrane, type 2 secretion, t4pb, t2ss, vibrio, cholera, membrane, transport, protein secretion, transport protein
  
• 2vmb.pdb. transport protein 25-jan-08 2vmb Ca
  Title: the three-dimensional structure of the cytoplasmic domains of epsf from the type 2 secretion system of vibrio cholerae
  Author: j. abendroth, k. v. korotkov, d. d. mitchell, a. kreger, w. g. j. hol
  Keywords: inner membrane, type 2 secretion, t4pb, t2ss, vibrio, cholera, membrane, transport, protein secretion, transport protein
  
• 2vnh.pdb. oxidoreductase 05-feb-08 2vnh
  Title: x-ray structure of the ferredoxin-nadp(h) reductase from rhodobacter capsulatus in complex with nadp. form ii at 2. 27 angstroms resolution
  Author: i. perez-dorado, j. a. hermoso
  Keywords: rhodobacter capsulatus, ferredoxin(flavodoxin)-nadp(h) reductase, nadp, flavoproteins, oxidoreductase
  
• 2vnl.pdb. viral protein 05-feb-08 2vnl
  Title: mutant y108wdel of the headbinding domain of phage p22 tailspike c-terminally fused to isoleucine zipper piigcn4 ( chimera ii)
  Author: j. j. mueller, a. seul, g. mueller, r. seckler, u. heinemann
  Keywords: hydrolase, late protein, viral protein, phage p22 tailspike protein, mutant y108wdel, head-binding domain, isoleucine zipper piigcn4
  
• 2vs6.pdb. hydrolase 21-apr-08 2vs6
  Title: k173a, r174a, k177a-trichosanthin
  Author: p. h. too, m. k. ma, a. n. mak, c. k. tung, g. zhu, s. w. au, k. b. wong, p. c. shaw, a. ng
  Keywords: protein synthesis inhibitor, tcs, toxin, hydrolase, plant defense
  
• 2vsh.pdb. transferase 23-apr-08 2vsh Ca
  Title: synthesis of cdp-activated ribitol for teichoic acid precursors in streptococcus pneumoniae
  Author: s. baur, j. marles-wright, s. buckenmaier, r. j. lewis, w. vollmer
  Keywords: nucleotidyltransferase, tari spr1149 cdp ribitol streptococcus pneumoniae techoic transferase, isoprene biosynthesis
  
• 2vsi.pdb. transferase 23-apr-08 2vsi Ca
  Title: synthesis of cdp-activated ribitol for teichoic acid precursors in streptococcus pneumoniae
  Author: s. baur, j. marles-wright, s. buckenmaier, r. j. lewis, w. vollmer
  Keywords: nucleotidyltransferase, transferase, isoprene biosynthesis
  
• 2vur.pdb. hydrolase 29-may-08 2vur
  Title: chemical dissection of the link between streptozotocin, o- glcnac and pancreatic cell death
  Author: s. pathak, h. c. dorfmueller, v. s. borodkin, d. m. f. van aalten
  Keywords: streptozotocin (stz), o-glcnac hydrolase (oga), glycosidase, coiled coil
  
• 2vyr.pdb. immune system 28-jul-08 2vyr
  Title: structure of human mdm4 n-terminal domain bound to a single domain antibody
  Author: g. w. yu, m. vaysburd, m. d. allen, g. settanni, a. r. fersht
  Keywords: complex, nucleus, antibody, human mdm4, immune system, zinc-finger, polymorphism, metal-binding
  
• 2w02.pdb. metal transport 08-aug-08 2w02 Mg
  Title: co-complex structure of achromobactin synthetase protein d ( acsd) with atp from pectobacterium chrysanthemi
  Author: s. schmelz, s. a. mcmahon, n. kadi, l. song, d. oves-costales, m. oke, h. liu, k. a. johnson, l. carter, m. f. white, g. l. challis, j. h. naismith
  Keywords: acsd, achromobactin biosynthesis, metal transport, pectobacterium chrysanthemi
  
• 2w03.pdb. metal transport 08-aug-08 2w03
  Title: co-complex structure of achromobactin synthetase protein d ( acsd) with adenosine, sulfate and citrate from pectobacterium chrysanthemi
  Author: s. schmelz, s. a. mcmahon, n. kadi, l. song, d. oves-costales, m. oke, h. liu, k. a. johnson, l. carter, m. f. white, g. l. challis, j. h. naismith
  Keywords: acsd, achromobactin biosynthesis, metal transport, pectobacterium chrysanthemi
  
• 2w04.pdb. metal transport 08-aug-08 2w04
  Title: co-complex structure of achromobactin synthetase protein d ( acsd) with citrate in atp binding site from pectobacterium chrysanthemi
  Author: s. schmelz, s. a. mcmahon, n. kadi, l. song, d. oves-costales, m. oke, h. liu, k. a. johnson, l. carter, m. f. white, g. l. challis, j. h. naismith
  Keywords: pectobacterium chrysanthemi, achromobactin biosynthesis, sspf, metal transport
  
• 2w09.pdb. oxidoreductase 12-aug-08 2w09 Fe
  Title: cyp51 of m. tuberculosis bound to an inhibitor cis-4- methyl-n-[(1s)-3-(methylsulfanyl)-1-(pyridin-4- ylcarbamoyl)propyl]cyclohexanecarboxamide
  Author: l. m. podust
  Keywords: protein-inhibitor complex, metal-binding, oxidoreductase, lipid synthesis, nadp, iron, heme, cytoplasm, monooxygenase, x-ray diffraction, sterol biosynthesis
  
• 2w0a.pdb. oxidoreductase 12-aug-08 2w0a Fe
  Title: cyp51 of m. tuberculosis bound to an inhibitor n-[(1s)-2-methyl-1-(pyridin-4-ylcarbamoyl)propyl] cyclohexanecarboxamide
  Author: l. m. podust
  Keywords: protein-inhibitor complex, metal-binding, oxidoreductase, lipid synthesis, nadp, iron, heme, cytoplasm, monooxygenase, x-ray diffraction, sterol biosynthesis
  
• 2w0b.pdb. oxidoreductase 12-aug-08 2w0b Fe
  Title: cyp51 of m. tuberculosis bound to an inhibitor 3-{[(4- methylphenyl)sulfonyl]amino}propyl pyridin-4-ylcarbamate
  Author: l. m. podust
  Keywords: protein-inhibitor complex, metal-binding, oxidoreductase, lipid synthesis, nadp, iron, heme, cytoplasm, monooxygenase, x-ray diffraction, sterol biosynthesis
  
• 2w0g.pdb. chaperone 15-aug-08 2w0g
  Title: hsp90 co-chaperone cdc37
  Author: s. sreeramulu, h. r. a. jonker, h. schwalbe, c. r. d. lancaster
  Keywords: cytoplasm, heat shock, atp-binding, stress response, nucleotide-binding, polymorphism, phosphoprotein, phosphorylation, chaperone co- chaperone regulation
  
• 2w0j.pdb. transferase 18-aug-08 2w0j
  Title: crystal structure of chk2 in complex with nsc 109555, a specific inhibitor
  Author: g. t. lountos, j. e. tropea, d. zhang, a. g. jobson, y. pommier, r. h. shoemaker, d. s. waugh
  Keywords: oncology, kinase, structure-assisted drug design, transferase, nucleotide-binding, li-fraumeni syndrome, serine/threonine-protein kinase
  
• 2w22.pdb. hydrolase 23-oct-08 2w22 Zn Ca
  Title: activation mechanism of bacterial thermoalkalophilic lipases
  Author: c. carrasco-lopez, c. godoy, b. de las rivas, g. fernandez-lorente, j. m. palomo, j. m. guisan, r. fernandez-lafuente, j. a. hermoso
  Keywords: hydrolase, open conformation, activation mechanism
  
• 2w31.pdb. oxygen transport 05-nov-08 2w31 Fe
  Title: globin domain of geobacter sulfurreducens globin-coupled sensor
  Author: a. pesce, l. thijs, m. nardini, f. desmet, l. sisinni, l. gourlay, a. bolli, m. coletta, s. van doorslaer, x. wan, m. alam, p. ascenzi, l. moens, m. bolognesi, s. dewilde
  Keywords: geobacter sulfurreducens, hexacoordination, globin coupled sensor
  
• 2w5y.pdb. transferase 15-dec-08 2w5y Zn
  Title: binary complex of the mixed lineage leukaemia (mll1) set domain with the cofactor product s-adenosylhomocysteine.
  Author: s. m. southall, p. s. wong, z. odho, s. m. roe, j. r. wilson
  Keywords: metal-binding, zinc-finger, dna-binding, bromodomain, transferase, methyltransferase, chromatin regulator, alternative splicing, histone modification, mll1, zinc, kmt2a, nucleus, apoptosis, set domai...
  
• 2w5z.pdb. transferase 15-dec-08 2w5z Zn
  Title: ternary complex of the mixed lineage leukaemia (mll1) set domain with the cofactor product s-adenosylhomocysteine and histone peptide.
  Author: s. m. southall, p. s. wong, z. odho, s. m. roe, j. r. wilson
  Keywords: metal-binding, zinc-finger, dna-binding, bromodomain, transferase, methyltransferase, chromatin regulator, alternative splicing, histone modification, mll1, zinc, kmt2a, nucleus, apoptosis, set domai...
  
• 2w61.pdb. glycoprotein 16-dec-08 2w61
  Title: saccharomyces cerevisiae gas2p apostructure (e176q mutant)
  Author: a. w. schuettelkopf, r. hurtado-guerrero, d. m. f. van aalten
  Keywords: cell membrane, fungal cell wall, transglycosylation, glucan, membrane, gpi-anchor, lipoprotein
  
• 2w8h.pdb. membrane protein 16-jan-09 2w8h Cl
  Title: crystal structure of spin labeled wza24-345.
  Author: g. hagelueken, w. j. ingledew, h. huang, b. petrovic-stojanovska, c. whitfield, h. elmkami, o. schiemann, j. h. naismith
  Keywords: membrane protein
  
• 2w8i.pdb. membrane protein 16-jan-09 2w8i
  Title: crystal structure of wza24-345.
  Author: g. hagelueken, w. j. ingledew, h. huang, b. petrovic-stojanovska, c. whitfield, h. elmkami, o. schiemann, j. h. naismith
  Keywords: membrane protein
  
• 2w8j.pdb. transferase 16-jan-09 2w8j
  Title: spt with plp-ser
  Author: l. g. carter, m. c. c. raman, k. a. johnson, d. j. campopiano, j. h. naismith
  
  
• 2w8k.pdb. transferase/dna 16-jan-09 2w8k Mg
  Title: y-family dna polymerase dpo4 bypassing n2-naphthyl-guanine adduct in syn orientation
  Author: r. l. eoff, h. zhang, m. egli, f. p. guengerich
  Keywords: transferase/dna
  
• 2w8l.pdb. transferase/dna 16-jan-09 2w8l Mg
  Title: y-family dna polymerase dpo4 bypassing n2-naphthyl-guanine adduct in anti orientation
  Author: r. l. eoff, h. zhang, m. egli, f. p. guengerich
  Keywords: transferase/dna
  
• 2w91.pdb. hydrolase 21-jan-09 2w91
  Title: structure of a streptococcus pneumoniae family 85 glycoside hydrolase, endo-d.
  Author: d. w. abbott, m. s. macauley, d. j. vocadlo, a. b. boraston
  Keywords: n-glycan, secreted, oxazoline, nag-thiazoline, substrate-participation, enzyme mechanism, anchimeric assistance
  
• 2w92.pdb. hydrolase 21-jan-09 2w92
  Title: structure of a streptococcus pneumoniae family 85 glycoside hydrolase, endo-d, in complex with nag-thiazoline.
  Author: d. w. abbott, m. s. macauley, d. j. vocadlo, a. b. boraston
  Keywords: nag-thiazoline, anchimeric assistance, n-glycan, substrate-participation, oxazoline, enzyme mechanism.
  
• 2w9m.pdb. dna replication 27-jan-09 2w9m Hg Zn
  Title: structure of family x dna polymerase from deinococcus radiodurans
  Author: n. leulliot, l. cladiere, f. lecointe, d. durand, u. hubscher, h. vantilbeurgh
  Keywords: dna repair, dna polymerase, dna replication
  
• 2zhd.pdb. hydrolase 04-feb-08 2zhd Ca
  Title: exploring trypsin s3 pocket
  Author: t. brandt, b. baum, a. heine, g. klebe
  Keywords: calcium, digestion, metal-binding, protease, secreted, serine protease, zymogen
  
• 2zhe.pdb. hydrolase/hydrolase inhibitor 04-feb-08 2zhe Na
  Title: exploring thrombin s3 pocket
  Author: t. brandt, b. baum, a. heine, g. klebe
  Keywords: zymogen, protease inhibitor, serine protease inhibitor, sulfation, hydrolase/hydrolase inhibitor complex
  
• 2zhf.pdb. hydrolase/hydrolase inhibitor 04-feb-08 2zhf Na
  Title: exploring thrombin s3 pocket
  Author: t. brandt, b. baum, a. heine, g. klebe
  Keywords: zymogen, protease inhibitor, serine protease inhibitor, sulfation, hydrolase/hydrolase inhibitor complex
  
• 2zhi.pdb. metal binding protein 06-feb-08 2zhi Na
  Title: crystal structure analysis of the sodium-bound annexin a4 at 1.58 a resolution
  Author: k. butsushita, k. ida, s. -i. fukuoka, y. arii
  Keywords: membrane binding protein, metal binding protein, annexin, calcium, calcium/phospholipid-binding
  
• 2zhj.pdb. metal binding protein 06-feb-08 2zhj Na
  Title: crystal structure analysis of the sodium-bound annexin a4 at 1.34 a resolution
  Author: k. butsushita, k. ida, s. -i. fukuoka, y. arii
  Keywords: membrane binding protein, metal binding protein, annexin, calcium, calcium/phospholipid-binding
  
• 2zhw.pdb. hydrolase/hydrolase inhibitor 08-feb-08 2zhw Na
  Title: exploring thrombin s3 pocket
  Author: t. brandt, b. baum, a. heine, g. klebe
  Keywords: zymogen, protease inhibitor, serine protease inhibitor, sulfation, hydrolase/hydrolase inhibitor complex
  
• 2zj2.pdb. hydrolase 29-feb-08 2zj2
  Title: archaeal dna helicase hjm apo state in form 1
  Author: t. oyama, h. oka, r. fujikane, y. ishino, k. morikawa
  Keywords: atp-binding, helicase, hydrolase, nucleotide- binding
  
• 2zj5.pdb. hydrolase 29-feb-08 2zj5
  Title: archaeal dna helicase hjm complexed with adp in form 1
  Author: t. oyama, h. oka, r. fujikane, y. ishino, k. morikawa
  Keywords: atp-binding, helicase, hydrolase, nucleotide- binding
  
• 2zj8.pdb. hydrolase 29-feb-08 2zj8
  Title: archaeal dna helicase hjm apo state in form 2
  Author: t. oyama, h. oka, r. fujikane, y. ishino, k. morikawa
  Keywords: atp-binding, helicase, hydrolase, nucleotide- binding
  
• 2zja.pdb. hydrolase 29-feb-08 2zja
  Title: archaeal dna helicase hjm complexed with amppcp in form 2
  Author: t. oyama, h. oka, r. fujikane, y. ishino, k. morikawa
  Keywords: atp-binding, helicase, hydrolase, nucleotide- binding
  
• 2zop.pdb. structural genomics, unknown function 28-may-08 2zop Se
  Title: x-ray crystal structure of a crispr-associated cmr5 family protein from thermus thermophilus hb8
  Author: k. sakamoto, y. agari, a. shinkai, s. yokoyama, s. kuramitsu, riken structural genomics/proteomics initiative (rsgi)
  Keywords: plasmid, nppsfa, national project on protein structural and functional analyses, riken structural genomics/proteomics initiative, rsgi, structural genomics, unknown function
  
• 2zqn.pdb. sugar binding protein 13-aug-08 2zqn
  Title: crystal structure of the earthworm r-type lectin c-half in complex with lactose
  Author: r. suzuki, a. kuno, t. hasegawa, j. hirabayashi, k. kasai, m. momma, z. fujimoto
  Keywords: hemagglutinin, r-type lectin, beta-trefoil fold, sugar complex, lectin, sugar binding protein
  
• 2zqo.pdb. sugar binding protein 13-aug-08 2zqo Cd
  Title: crystal structure of the earthworm r-type lectin c-half in complex with galnac
  Author: r. suzuki, a. kuno, t. hasegawa, j. hirabayashi, k. kasai, m. momma, z. fujimoto
  Keywords: hemagglutinin, r-type lectin, beta-trefoil fold, sugar complex, lectin, sugar binding protein
  
• 2zt9.pdb. photosynthesis 27-sep-08 2zt9 Mg Fe
  Title: crystal structure of the cytochrome b6f complex from nostoc sp. pcc 7120
  Author: w. a. craner, baniulis d. , yamashita e.
  Keywords: cytochrome b6f complex, heme b,2fe-2s protein, cytochrome f
  
• 2zvk.pdb. transferase 11-nov-08 2zvk
  Title: crystal structure of pcna in complex with dna polymerase eta fragment
  Author: a. hishiki, h. hashimoto, t. hanafusa, k. kamei, e. ohashi, t. shimizu, h. ohmori, m. sato
  Keywords: polymorphism, schiff base, xeroderma pigmentosum
  
• 2zvl.pdb. transferase 11-nov-08 2zvl Zn
  Title: crystal structure of pcna in complex with dna polymerase kappa fragment
  Author: a. hishiki, h. hashimoto, t. hanafusa, k. kamei, e. ohashi, t. shimizu, h. ohmori, m. sato
  Keywords: pcna, clamp, translesion synthesis, tls, dna polymerase, tls polymerase, complex, pip-box, dna polymerase kappa, transferase
  
• 2zvm.pdb. transferase 11-nov-08 2zvm
  Title: crystal structure of pcna in complex with dna polymerase iota fragment
  Author: a. hishiki, h. hashimoto, t. hanafusa, k. kamei, e. ohashi, t. shimizu, h. ohmori, m. sato
  Keywords: pcna, clamp, translesion synthesis, tls, dna polymerase, complex, pip-box, dna polymerase iota, transferase
  
• 2zvp.pdb. transferase 14-nov-08 2zvp
  Title: crystal structure of mouse cytosolic sulfotransferase msult1d1 complex with pap and p-nitrophenol
  Author: t. teramoto, y. sakakibara, m. -c. liu, m. suiko, m. kimura, y. kakuta
  Keywords: sulfotransferase, p-nitrophenol, sulfonation, transferase
  
• 2zvq.pdb. transferase 14-nov-08 2zvq
  Title: crystal structure of mouse cytosolic sulfotransferase msult1d1 complex with pap and alpha-naphthol
  Author: t. teramoto, y. sakakibara, m. -c. liu, m. suiko, m. kimura, y. kakuta
  Keywords: sulfotransferase, naphthol, sulfonation, transferase
  
• 2zyk.pdb. sugar binding protein 26-jan-09 2zyk
  Title: crystal structure of cyclo/maltodextrin-binding protein complexed with gamma-cyclodextrin
  Author: t. tonozuka, a. sogawa, m. yamada, n. matsumoto, h. yoshida, s. kamitori, k. ichikawa, m. mizuno, a. nishikawa, y. sakano
  Keywords: closed form, sugar binding protein
  
• 3bg6.pdb. oxidoreductase 26-nov-07 3bg6
  Title: pyranose 2-oxidase from trametes multicolor, e542k mutant
  Author: t. c. tan, c. divne
  Keywords: gmc oxidoreductase, e542k mutant, rossman fold, phbh fold, homotetramer, 8-alpha-(n3) histidyl flavinylation
  
• 3bg7.pdb. oxidoreductase 26-nov-07 3bg7
  Title: pyranose 2-oxidase from trametes multicolor, l537g mutant
  Author: p. norberg, t. c. tan, c. divne
  Keywords: gmc oxidoreductase, l537g mutant, rossmanfold, phbh fold, homotetramer, 8-alpha-(n3) histidyl flavinylation
  
• 3big.pdb. hydrolase 30-nov-07 3big
  Title: crystal structure of the fructose-1,6-bisphosphatase glpx from e.coli in complex with inorganic phosphate
  Author: v. v. lunin, t. skarina, g. brown, a. f. yakunin, a. m. edwards, a. savchenko
  Keywords: 1,6-bisphosphatase, carbohydrate metabolism, cytoplasm, hydrolase, manganese
  
• 3bih.pdb. hydrolase 30-nov-07 3bih
  Title: crystal structure of fructose-1,6-bisphosphatase from e.coli glpx
  Author: v. v. lunin, t. skarina, g. brown, a. f. yakunin, a. m. edwards, a. savchenko
  Keywords: 1,6-bisphosphatase, carbohydrate metabolism, cytoplasm, hydrolase, manganese
  
• 3blt.pdb. hydrolase 11-dec-07 3blt
  Title: crystal structures of yoph complexed with pvsn and pvs, inhibitors of yoph which co-valent bind to cys of active site
  Author: s. liu, z-y. zhang
  Keywords: binding affinity, binding selectivity, hydrolase, membrane, outer membrane, plasmid, protein phosphatase, secreted, virulence
  
• 3bly.pdb. oxidoreductase 11-dec-07 3bly
  Title: pyranose 2-oxidase from trametes multicolor, e542k/l537w
  Author: t. c. tan, c. divne
  Keywords: gmc oxidoreductase, e542k/l537w thermostable mutant, rossman fold, phbh fold, homotetramer, 8-alpha-(n3) histidyl flavinylation
  
• 3bo8.pdb. immune system 17-dec-07 3bo8
  Title: the high resolution crystal structure of hla-a1 complexed with the mage-a1 peptide
  Author: p. kumar, a. vahedi-faridi, w. saenger, a. ziegler, b. uchanska- ziegler
  Keywords: tumor antigen, immune system
  
• 3c22.pdb. immune system, sugar binding protein 24-jan-08 3c22 Mg Ca
  Title: crystal structure of the carbohydrate recognition domain of human langerin
  Author: m. thepaut
  Keywords: coiled coil, glycoprotein, membrane, signal-anchor, transmembrane, immune system, sugar binding protein
  
• 3c3i.pdb. hydrolase 28-jan-08 3c3i Mg
  Title: evolution of chlorella virus dutpase
  Author: m. yamanishi, k. homma, y. zhang, l. v. j. etten, h. moriyama
  Keywords: hydrolase
  
• 3c74.pdb. transferase 06-feb-08 3c74
  Title: x-ray structure of the uridine phosphorylase from salmonella typhimurium in complex with 2,2'-anhydrouridine at 2.38a resolution
  Author: a. a. lashkov, a. m. mikhailov
  Keywords: cytoplasm, glycosyltransferase
  
• 3c7e.pdb. hydrolase 07-feb-08 3c7e Na Ca
  Title: crystal structure of a glycoside hydrolase family 43 arabinoxylan arabinofuranohydrolase from bacillus subtilis.
  Author: e. vandermarliere, t. m. bourgois, m. d. winn, s. van campenhout, g. volckaert, s. v. strelkov, j. a. delcour, a. rabijns, c. m. courtin
  Keywords: beta-sandwich, xylan degradation, hydrolase
  
• 3c7f.pdb. hydrolase 07-feb-08 3c7f Na Ca
  Title: crystal structure of a glycoside hydrolase family 43 arabinoxylan arabinofuranohydrolase from bacillus subtilis in complex with xylotriose.
  Author: e. vandermarliere, t. m. bourgois, m. d. winn, s. van campenhout, g. volckaert, s. v. strelkov, j. a. delcour, a. rabijns, c. m. courtin
  Keywords: beta-sandwich, xylan degradation, hydrolase
  
• 3c7g.pdb. hydrolase 07-feb-08 3c7g Na Ca
  Title: crystal structure of a glycoside hydrolase family 43 arabinoxylan arabinofuranohydrolase from bacillus subtilis in complex with xylotetraose.
  Author: e. vandermarliere, t. m. bourgois, m. d. winn, s. van campenhout, g. volckaert, s. v. strelkov, j. a. delcour, a. rabijns, c. m. courtin
  Keywords: beta-sandwich, xylan degradation, hydrolase
  
• 3c7h.pdb. hydrolase 07-feb-08 3c7h Na Ca
  Title: crystal structure of glycoside hydrolase family 43 arabinoxylan arabinofuranohydrolase from bacillus subtilis in complex with axos-4-0.5.
  Author: e. vandermarliere, t. m. bourgois, m. d. winn, s. van campenhout, g. volckaert, s. v. strelkov, j. a. delcour, a. rabijns, c. m. courtin
  Keywords: beta-sandwich, xylan degradation, hydrolase
  
• 3c7o.pdb. hydrolase 08-feb-08 3c7o Na Ca
  Title: crystal structure of a glycoside hydrolase family 43 arabinoxylan arabinofuranohydrolase from bacillus subtilis in complex with cellotetraose.
  Author: e. vandermarliere, t. m. bourgois, m. d. winn, s. van campenhout, g. volckaert, s. v. strelkov, j. a. delcour, a. rabijns, c. m. courtin
  Keywords: beta-sandwich, xylan degradation, hydrolase
  
• 3c7x.pdb. hydrolase 08-feb-08 3c7x Cl Na
  Title: hemopexin-like domain of matrix metalloproteinase 14
  Author: a. tochowicz, y. itoh, k. maskos, w. bode, p. goettig
  Keywords: pro-mmp-2, timp-2, metastasis, calcium, cleavage on pair of basic residues, hydrolase, metal-binding, metalloprotease, polymorphism, protease, transmembrane, zinc, zymogen
  
• 3c9b.pdb. chaperone 15-feb-08 3c9b Se
  Title: crystal structure of semet vps75
  Author: j. l. keck, c. e. berndsen, t. tsubota, s. e. lindner, s. lee, j. m. holton, p. d. kaufman, j. m. denu
  Keywords: hat, histone chaperone, nucleus, phosphoprotein, protein transport, transport
  
• 3c9d.pdb. chaperone 15-feb-08 3c9d
  Title: crystal structure of vps75
  Author: c. e. berndsen, t. tsubota, s. e. lindner, s. lee, j. m. holton, p. d. kaufman, j. l. keck, j. m. denu
  Keywords: histone chaperone, nucleus, phosphoprotein, protein transport, transport
  
• 3chj.pdb. metal binding protein 10-mar-08 3chj Ca
  Title: crystal structure of alpha-14 giardin
  Author: p. pathuri, h. luecke
  Keywords: annexin, metal binding protein
  
• 3chk.pdb. metal binding protein 10-mar-08 3chk Ca
  Title: calcium bound structure of alpha-14 giardin
  Author: p. pathuri, h. luecke
  Keywords: annexin, metal binding protein
  
• 3chl.pdb. metal binding protein 10-mar-08 3chl Mg
  Title: crystal structure of alpha-14 giardin with magnesium bound
  Author: p. pathuri, h. luecke
  Keywords: annexin, metal binding protein
  
• 3cm3.pdb. hydrolase 20-mar-08 3cm3
  Title: high resolution crystal structure of the vaccinia virus dual-specificity phosphatase vh1
  Author: a. c. koksal, g. cingolani
  Keywords: vaccinia virus, vh1, hydrolase, late protein, protein phosphatase
  
• 3cnk.pdb. structural protein 26-mar-08 3cnk
  Title: crystal structure of the dimerization domain of human filamin a
  Author: b. j. lee, m. d. seo, s. h. seok, s. j. lee, a. r. kwon, h. im
  Keywords: flna24, x-ray crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein, polymorphism, structural protein
  
• 3co9.pdb. transferase 27-mar-08 3co9
  Title: crystal structure of hcv ns5b polymerase with a novel pyridazinone inhibitor
  Author: q. han, r. e. showalter, q. zhao, c. r. kissinger
  Keywords: nucleotide binding, nucleotidyltransferase, ribonucleoprotein, rna replication, rna-binding, rna-directed rna polymerase, transcription, transferase, antiviral, hydrolase, nucleotide-binding
  
• 3cp7.pdb. hydrolase 31-mar-08 3cp7
  Title: crystal structure of a thermostable serine protease al20 from extremophilic microoganism
  Author: n. yang, j. nan, x. -d. su
  Keywords: hydrolase
  
• 3d1r.pdb. hydrolase 06-may-08 3d1r Cl Mg Ca
  Title: structure of e. coli glpx with its substrate fructose 1,6- bisphosphate
  Author: a. singer, t. skarina, a. dong, g. brown, a. joachimiak, a. m. edwards, a. f. yakunin, a. savchenko, midwest center for structural genomics (mcsg)
  Keywords: mcsg
  
• 3d25.pdb. immune system 07-may-08 3d25
  Title: crystal structure of ha-1 minor histocompatibility antigen bound to human class i mhc hla-a2
  Author: s. nicholls, k. p. piper, f. mohammed, t. r. dafforn, s. tenzer, m. salim, p. mahendra, c. craddock, p. van endert, h. schild, m. cobbold, v. h. engelhard, p. a. h. moss, b. e. willcox
  Keywords: hla-a2, secondary anchor residue, glycoprotein, immune system, minor histocompatibility antigen, stem cell transplantation, immune response
  
• 3d4f.pdb. hydrolase 14-may-08 3d4f
  Title: shv-1 beta-lactamase complex with ln1-255
  Author: p. pattanaik, c. r. bethel, a. m. hujer, r. a. bonomo, j. d. buynak, f. van den akker
  Keywords: drug design, antibiotic resistance, hydrolase, plasmid
  
• 3d57.pdb. hormone, transcription receptor 15-may-08 3d57 I
  Title: tr variant d355r
  Author: n. jouravel
  Keywords: zinc, zinc-finger, hormone, transcription receptor
  
• 3d6n.pdb. hydrolase/transferase 20-may-08 3d6n Zn
  Title: crystal structure of aquifex dihydroorotase activated by aspartate transcarbamoylase
  Author: b. f. p. edwards
  Keywords: chamber, pores, internal cavity, hydrolase, metal- binding, pyrimidine biosynthesis, zinc, transferase, hydrolase/transferase complex
  
• 3d6o.pdb. hydrolase 20-may-08 3d6o
  Title: the rnase a- 5'-deoxy-5'-n-(ethyl isonipecotatyl)uridine complex
  Author: d. d. leonidas, s. e. zographos, n. g. oikonomakos
  Keywords: ribonuclease, uridine complex, endonuclease, glycation, glycoprotein, nuclease, secreted
  
• 3d6p.pdb. hydrolase 20-may-08 3d6p
  Title: rnase a- 5'-deoxy-5'-n-morpholinouridine complex
  Author: d. d. leonidas, s. e. zogrpahos, n. g. oikonomakos
  Keywords: ribonuclease a, ligand, endonuclease, glycation, glycoprotein, nuclease, secreted
  
• 3d6q.pdb. hydrolase 20-may-08 3d6q
  Title: the rnase a- 5'-deoxy-5'-n-piperidinouridine complex
  Author: d. d. leonidas, s. e. zographos, n. g. oikonomakos
  Keywords: ribonuclease a, ligand, endonuclease, glycation, glycoprotein, nuclease, secreted
  
• 3d6s.pdb. hydrolase 20-may-08 3d6s
  Title: crystal structure of mite allergen der f 1
  Author: m. chruszcz, m. d. chapman, l. d. vailes, a. pomes, w. minor
  Keywords: dust mites, allergen, glycoprotein, hydrolase, protease, secreted, thiol protease, zymogen
  
• 3d7b.pdb. hydrolase 21-may-08 3d7b
  Title: the ribonuclease a- 5'-deoxy-5'-n-pyrrolidinouridine complex
  Author: d. d. leonidas, s. e. zographos, n. g. oikonomakos
  Keywords: ribonuclease a, ligand, endonuclease, glycation, glycoprotein, nuclease, secreted
  
• 3d8y.pdb. hydrolase 26-may-08 3d8y
  Title: rnase a- 5'-deoxy-5'-n-piperidinothymidine complex
  Author: d. d. leonidas, s. e. zographos, n. g. oikonomakos
  Keywords: hydrolase, ligand binding, endonuclease, glycation, glycoprotein, nuclease, secreted
  
• 3d8z.pdb. hydrolase 26-may-08 3d8z
  Title: rnase a- 5'-deoxy-5'-n-pyrrolidinothymidine complex
  Author: d. d. leonidas, s. e. zographos, n. g. oikonomakos
  Keywords: hydrolase, ligand binding, endonuclease, glycation, glycoprotein, nuclease, secreted
  
• 3d9t.pdb. apoptosis 27-may-08 3d9t Zn
  Title: ciap1-bir3 in complex with n-terminal peptide from caspase- 9 (atpfqe)
  Author: r. kulathila, a. price
  Keywords: apoptosis, cytoplasm, metal-binding, polymorphism, zinc, zinc-finger, alternative splicing, hydrolase, protease, thiol protease, zymogen
  
• 3d9u.pdb. apoptosis 27-may-08 3d9u Zn
  Title: the bir3 domain of ciap1 in complex with the n terminal peptide from smac/diablo (avpiaq).
  Author: r. kulathila, a. price
  Keywords: apoptosis, cytoplasm, metal-binding, polymorphism, zinc, zinc-finger
  
• 3d9y.pdb. protein binding 28-may-08 3d9y
  Title: crystal structure of profilin from schizosaccharomyces pombe
  Author: o. c. ezezika, b. j. nolen, t. d. pollard
  Keywords: pombe, yeast, , actin-binding, cytoplasm, cytoskeleton, protein binding
  
• 3dak.pdb. transferase 29-may-08 3dak Mg
  Title: crystal structure of domain-swapped osr1 kinase domain
  Author: s lee, m. h. cobb, e. j. goldsmith
  Keywords: ste20, domain-swapping, atp-binding, kinase, magnesium, metal-binding, nucleotide- binding, phosphoprotein, polymorphism, serine/threonine- protein kinase, transferase
  
• 3dav.pdb. protein binding 30-may-08 3dav Na
  Title: schizosaccharomyces pombe profilin crystallized from sodium formate
  Author: o. c. ezezika, b. j. nolen, t. d. pollard
  Keywords: yeast, pombe, protein-protein interaction, actin- binding, cytoplasm, cytoskeleton, protein binding
  
• 3dbq.pdb. transferase 02-jun-08 3dbq
  Title: crystal structure of ttk kinase domain
  Author: w. wang, y. t. yang, y. f. gao, s. c. zhu, f. wang, w. old, q. b. xu, k. resing, n. ahn, m. lei, x. d. liu
  Keywords: kinase activation, phosphorylation, atp- binding, kinase, nucleotide-binding, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase, tyrosine-protein kinase
  
• 3dc4.pdb. motor protein 03-jun-08 3dc4 Mg
  Title: crystal structure of the drosophila kinesin family member nod in complex with adp
  Author: j. c. cochran, n. k. mulko, f. j. kull
  Keywords: catalytic domain, atpase, microtubule, adp, nucleotide-binding protein, atp-binding, coiled coil, motor protein, nucleotide-binding
  
• 3dcb.pdb. motor protein 03-jun-08 3dcb Mg
  Title: crystal structure of the drosophila kinesin family member nod in complex with amppnp
  Author: j. c. cochran, n. k. mulko, f. j. kull
  Keywords: catalytic domain, atpase, microtubule, amppnp, nucleotide-binding protein, atp-binding, coiled coil, motor protein, nucleotide-binding
  
• 3dco.pdb. motor protein 04-jun-08 3dco Mg Zn (cryo-electron microscopy)
  Title: drosophila nod (3dc4) and bovine tubulin (1jff) docked into the 11-angstrom cryo-em map of nucleotide-free nod complexed to the microtubule
  Author: c. v. sindelar, j. c. cochran, f. j. kull
  Keywords: catalytic domain, atpase, microtubule, adp, nucleotide-binding protein, cryo-em, 3d reconstruction, tubulin, nucleotide-free, atp-binding, coiled coil, motor protein, nucleotide-binding
  
• 3dd2.pdb. hydrolase/rna 04-jun-08 3dd2 Mg F
  Title: crystal structure of an rna aptamer bound to human thrombin
  Author: s. b. long, b. a. sullenger
  Keywords: aptamer, rna, dna, heparin, exosite, hydrolase, protease, serine protease, hydrolase/rna complex
  
• 3dd6.pdb. transferase 05-jun-08 3dd6
  Title: crystal structure of rph, an exoribonuclease from bacillus anthracis at 1.7 a resolution
  Author: a. e. rawlings, e. v. blagova, v. m. levdikov, m. j. fogg, k. s. wilson, a. j. wilkinson
  Keywords: bacillus anthracis, trna maturation, crystal structure, rnase ph., transferase
  
• 3dgp.pdb. transcription 14-jun-08 3dgp
  Title: crystal structure of the complex between tfb5 and the c- terminal domain of tfb2
  Author: d. e. kainov, j. cavarelli, j. m. egly, a. poterszman
  Keywords: beta-alpha-beta spilt, heterodimer, dna damage, dna excision, dna repair, nucleus, transcription, transcription regulation
  
• 3dlr.pdb. transferase 29-jun-08 3dlr Mg Se
  Title: crystal structure of the catalytic core domain from pfv integrase
  Author: e. valkov, p. cherepanov
  Keywords: rve superfamily domain, dna integration, dna recombination, endonuclease, hydrolase, magnesium, metal-binding, multifunctional enzyme, nuclease, nucleotidyltransferase, nucleus, transferase, virion
  
• 3dnm.pdb. hydrolase 02-jul-08 3dnm
  Title: crystal structure hormone-sensitive lipase from a metagenome library
  Author: k. y. hwang, k. h. nam
  
  
• 3dom.pdb. transcription 04-jul-08 3dom
  Title: crystal structure of the complex between tfb5 and the c- terminal domain of tfb2
  Author: d. e. kainov, j. cavarelli, j. m. egly, a. poterszman
  Keywords: heterodimer, beta-alpha-beta split, beta-strand addition, dna damage, dna excision, dna repair, nucleus, transcription, transcription regulation
  
• 3dte.pdb. gene regulation 15-jul-08 3dte Se
  Title: crystal structure of the irre protein, a central regulator of dna damage repair in deinococcaceae
  Author: a. vujicic-zagar, r. dulermo, m. le gorrec, f. vannier, p. servant, s. sommer, a. de groot, l. serre
  Keywords: radiotolerance, gene regulation, metallopeptidase, irre
  
• 3dti.pdb. gene regulation 15-jul-08 3dti Zn
  Title: crystal structure of the irre protein, a central regulator of dna damage repair in deinococcaceae
  Author: a. vujicic-zagar, r. dulermo, m. le gorrec, f. vannier, p. servant, s. sommer, a. de groot, l. serre
  Keywords: deinococcus, radiotolerance, gene regulation, metallopeptidase
  
• 3e3l.pdb. transferase 07-aug-08 3e3l
  Title: the r-state glycogen phosphorylase
  Author: d. d. leonidas, s. e. zographos, n. g. oikonomakos
  Keywords: transferase
  
• 3e4h.pdb. plant protein 11-aug-08 3e4h
  Title: crystal structure of the cyclotide varv f
  Author: s. h. hu
  Keywords: circular proteins, cystine knot, cyclization, plant protein, knottin, plant defense
  
• 3e5j.pdb. oxidoreductase 14-aug-08 3e5j Fe
  Title: crystal structure of cyp105p1 wild-type ligand-free form
  Author: l. h. xu, s. fushinobu, h. ikeda, t. wakagi, h. shoun
  Keywords: oxidoreductase, heme, iron, metal-binding, monooxygenase
  
• 3e5k.pdb. oxidoreductase 14-aug-08 3e5k Fe
  Title: crystal structure of cyp105p1 wild-type 4-phenylimidazole complex
  Author: l. h. xu, s. fushinobu, h. ikeda, t. wakagi, h. shoun
  Keywords: oxidoreductase, heme, iron, metal-binding, monooxygenase
  
• 3e5l.pdb. oxidoreductase 14-aug-08 3e5l Fe
  Title: crystal structure of cyp105p1 h72a mutant
  Author: l. h. xu, s. fushinobu, h. ikeda, t. wakagi, h. shoun
  Keywords: oxidoreductase, heme, iron, metal-binding, monooxygenase
  
• 3e8y.pdb. toxin 20-aug-08 3e8y Cl
  Title: xray structure of scorpion toxin bmbktx1
  Author: k. mandal, b. l. pentelute, v. tereshko, a. a. kossiakoff, s. b. h. kent
  Keywords: direct methods, xray crystal stucture, ionic channel inhibitor, neurotoxin, potassium channel inhibitor, secreted, toxin
  
• 3eaq.pdb. hydrolase 26-aug-08 3eaq Cl
  Title: novel dimerization motif in the dead box rna helicase hera form 2, complete dimer, symmetric
  Author: d. klostermeier, m. g. rudolph
  Keywords: dimer, atp-binding, helicase, hydrolase, nucleotide-binding
  
• 3ear.pdb. hydrolase 26-aug-08 3ear
  Title: novel dimerization motif in the dead box rna helicase hera: form 1, partial dimer
  Author: d. klostermeier, m. g. rudolph
  Keywords: dimer, atp-binding, helicase, hydrolase, nucleotide-binding
  
• 3eas.pdb. hydrolase 26-aug-08 3eas
  Title: novel dimerization motif in the dead box rna helicase hera: form 1, complete dimer, asymmetric
  Author: d. klostermeier, m. g. rudolph
  Keywords: dimer, atp-binding, helicase, hydrolase, nucleotide-binding
  
• 3eba.pdb. immune system/hydrolase 27-aug-08 3eba
  Title: cabhul6 fglw mutant (humanized) in complex with human lysozyme
  Author: r. loris, c. vincke, d. saerens, s. martinez-rodriguez, s. muyldermans, k. conrath
  Keywords: immune system/hydrolase complex
  
• 3ebj.pdb. transferase 27-aug-08 3ebj Mg
  Title: crystal structure of an avian influenza virus protein
  Author: p. yuan, m. bartlam, z. lou, s. chen, z. rao, y. liu
  Keywords: avian influenza, polymerase, pa_n, phosphoprotein, transferase
  
• 3eco.pdb. transcription 01-sep-08 3eco
  Title: crystal structure of mepr, a transcription regulator of the staphylococcus aureus multidrug efflux pump mepa
  Author: r. g. brennan, m. kumaraswami
  Keywords: dna-binding, transcription, transcription regulation
  
• 3edt.pdb. motor protein, transport protein 03-sep-08 3edt
  Title: crystal structure of the mutated s328n hklc2 tpr domain
  Author: h. zhu, y. shen, f. mackenzie, c. h. arrowsmith, a. m. edwards, c. bountra, j. weigelt, a. bochkarev, h. park, structural genomics consortium (sgc)
  Keywords: structural genomics, structural genomics consortium, sgc, coiled coil, microtubule, motor protein, phosphoprotein, polymorphism, tpr repeat, transport protein
  
• 3edu.pdb. structural protein 03-sep-08 3edu
  Title: crystal structure of the ankyrin-binding domain of human erythroid spectrin
  Author: m. simonovic, p. stabach, i. simonovic, t. a. steitz, j. s. morrow
  Keywords: structural protein
  
• 3eiu.pdb. hydrolase 17-sep-08 3eiu F
  Title: a second transient position of atp on its trail to the nucleotide-binding site of subunit b of the motor protein a1ao atp synthase
  Author: s. m. s. manimekalai, a. kumar, a. m. balakrishna, g. gruber
  Keywords: atp synthesis, hydrogen ion transport, ion transport, transport
  
• 3ej6.pdb. oxidoreductase 17-sep-08 3ej6 Fe
  Title: neurospora crassa catalase-3 crystal structure
  Author: a. diaz, v. -j. valdes, e. rudino-pinera, e. horjales, w. hansberg
  Keywords: neurospora crassa, heme, hydrogen peroxide, iron, metal-binding, oxidoreductase, peroxidase
  
• 3ekl.pdb. lyase 19-sep-08 3ekl Zn Na
  Title: structural characterization of tetrameric mycobacterium tuberculosis fructose 1,6-bisphosphate aldolase - substrate binding and catalysis mechanism of a class iia bacterial aldolase
  Author: s. pegan, k. rukseree, s. g. franzblau, a. d. mesecar
  Keywords: 6-bisphosphate aldolase, zinc enzyme, mechanism, mycobacterium tuberculosis, dihydroxyacetone, glyceraldehyde-3-phosphate, aldol condensation, glycolysis, lyase, metal-binding, zinc
  
• 3ekz.pdb. lyase 19-sep-08 3ekz Zn Na
  Title: structural characterization of tetrameric mycobacterium tuberculosis fructose 1,6-bisphosphate aldolase - substrate binding and catalysis mechanism of a class iia bacterial aldolase
  Author: s. pegan, k. rukseree, s. g. franzblau, a. d. mesecar
  Keywords: 6-bisphosphate aldolase, zinc enzyme, mechanism, mycobacterium tuberculosis, dihydroxyacetone, glyceraldehyde-3-phosphate, aldol condensation, glycolysis, lyase, metal-binding, zinc
  
• 3elf.pdb. lyase 22-sep-08 3elf Zn Na
  Title: structural characterization of tetrameric mycobacterium tuberculosis fructose 1,6-bisphosphate aldolase - substrate binding and catalysis mechanism of a class iia bacterial aldolase
  Author: s. pegan, k. rukseree, s. g. franzblau, a. d. mesecar
  Keywords: 6-bisphosphate aldolase, zinc enzyme, mechanism, mycobacterium tuberculosis, dihydroxyacetone, glyceraldehyde-3-phosphate, aldol condensation, glycolysis, lyase, metal-binding, zinc
  
• 3els.pdb. splicing 23-sep-08 3els Cl Mg
  Title: crystal structure of yeast pml1p, residues 51-204
  Author: s. trowitzsch, g. weber, r. luehrmann, m. c. wahl
  Keywords: forkhead-associated domain (fha) domain, pre-mrna retention and splicing, protein phosphorylation, res complex, x-ray crystallography, cytoplasm, mrna processing, mrna splicing, nucleus
  
• 3elv.pdb. splicing 23-sep-08 3elv
  Title: crystal structure of full-length yeast pml1p
  Author: s. trowitzsch, g. weber, r. l hrmann, m. c. wahl
  Keywords: forkhead-associated domain (fha) domain, pre-mrna retention and splicing, protein phosphorylation, res complex, x-ray crystallography, cytoplasm, mrna processing, mrna splicing, nucleus
  
• 3esx.pdb. electron transport 06-oct-08 3esx Cl Ca
  Title: e16ke61kd126kd150k flavodoxin from anabaena
  Author: b. herguedas, j. a. hermoso, m. martinez-julvez, g. goni, m. medina
  Keywords: electron transport, flavoprotein, fmn, transport
  
• 3esy.pdb. electron transport 06-oct-08 3esy
  Title: e16ke61k flavodoxin from anabaena
  Author: b. herguedas, m. martinez-julvez, j. a. hermoso, g. goni, m. medina
  Keywords: electron transport, flavoprotein, fmn, transport
  
• 3esz.pdb. electron transport 06-oct-08 3esz Mg
  Title: k2ak3a flavodoxin from anabaena
  Author: b. herguedas, m. martinez-julvez, j. hermoso, g. goni, m. medina
  Keywords: electron transport, flavoprotein, fmn, transport
  
• 3eyd.pdb. viral protein 20-oct-08 3eyd B Zn
  Title: structure of hcv ns3-4a protease with an inhibitor derived from a boronic acid
  Author: s. venkatraman, w. wu, a. j. prongay, v. girijavallabhan, f. g. njoroge
  Keywords: ns3 protease domain, serine protease, boronic acid inhibitor, envelope protein, helicase, hydrolase, nucleotide-binding, rna replication, transmembrane, viral protein
  
• 3eyg.pdb. transferase 20-oct-08 3eyg
  Title: crystal structures of jak1 and jak2 inhibitor complexes
  Author: n. k. williams, r. s. bamert, o. patell, c. wang, p. m. walden, e. fantino
  Keywords: atp-binding, kinase, nucleotide-binding, phosphoprotein, sh2 domain, transferase, tyrosine-protein kinase
  
• 3eyh.pdb. transferase 20-oct-08 3eyh F
  Title: crystal structures of jak1 and jak2 inhibitor complexes
  Author: n. k. williams, r. s. bamert, o. patell, c. wang, p. m. walden, e. fantino
  Keywords: atp-binding, kinase, nucleotide-binding, phosphoprotein, sh2 domain, transferase, tyrosine-protein kinase
  
• 3f21.pdb. hydrolase 28-oct-08 3f21
  Title: crystal structure of zalpha in complex with d(cacgtg)
  Author: s. c. ha, j. choi, k. k. kim
  Keywords: rna-mediated gene silencing, ubl conjugation, zinc
  
• 3f22.pdb. hydrolase 28-oct-08 3f22
  Title: crystal structure of zalpha in complex with d(cgtacg)
  Author: s. c. ha, j. choi, k. k. kim
  Keywords: rna-mediated gene silencing, ubl conjugation, zinc
  
• 3f23.pdb. hydrolase 28-oct-08 3f23
  Title: crystal structure of zalpha in complex with d(cggccg)
  Author: s. c. ha, j. choi, k. k. kim
  Keywords: rna-mediated gene silencing, ubl conjugation, zinc
  
• 3f46.pdb. oxidoreductase 31-oct-08 3f46 Fe
  Title: the crystal structure of c176a mutated [fe]-hydrogenase (hmd) holoenzyme from methanocaldococcus jannaschii
  Author: t. hiromoto, s. vogt, e. warkentin, r. k. thauer, s. shima, u. ermler
  Keywords: helix bundle, complex with iron guanylyl pyridinol cofactor, c176a mutant, methanogenesis, one- carbon metabolism, oxidoreductase
  
• 3f47.pdb. oxidoreductase 31-oct-08 3f47 Na Fe
  Title: the crystal structure of [fe]-hydrogenase (hmd) holoenzyme from methanocaldococcus jannaschii
  Author: t. hiromoto, o. pilak, e. warkentin, r. k. thauer, s. shima, u. ermler
  Keywords: helix bundle, complex with iron guanylyl pyridinol cofactor, methanogenesis, one-carbon metabolism, oxidoreductase
  
• 3f5v.pdb. hydrolase 04-nov-08 3f5v Ca
  Title: c2 crystal form of mite allergen der p 1
  Author: e. a. stura, w. minor, m. chruszcz, j. m. saint remy
  Keywords: asthma, dust mites, allergen, glycoprotein, hydrolase, polymorphism, protease, secreted, thiol protease
  
• 3f7k.pdb. oxidoreductase 09-nov-08 3f7k Cu Zn Na
  Title: x-ray crystal structure of an alvinella pompejana cu,zn superoxide dismutase- hydrogen peroxide complex
  Author: d. s. shin, m. didonato, d. p. barondeau, e. d. getzoff, j. a. tainer
  Keywords: thermostable protein, hydrogen peroxide product complex
  
• 3f7l.pdb. oxidoreductase 09-nov-08 3f7l Cu Zn Na
  Title: x-ray crystal structure of alvinella pompejana cu,zn superoxide dismutase
  Author: d. s. shin, m. didonato, d. p. barondeau, e. d. getzoff, j. a. tainer
  Keywords: thermostable protein
  
• 3f8g.pdb. hydrolase 12-nov-08 3f8g
  Title: the x-ray structure of a dimeric variant of human pancreatic ribonuclease with high cytotoxic and antitumor activities
  Author: a. merlino, g. avella, l. mazzarella, f. sica
  Keywords: ribonuclease, 3d domain swapping, unswapped dimer, dimers, endonuclease, glycoprotein, hydrolase, nuclease, secreted
  
• 3f9b.pdb. hydrolase 13-nov-08 3f9b V
  Title: w354f yersinia enterocolitica ptpase complexed with divanadate
  Author: t. a. s. brandao, h. robinson, s. j. johnson, a. c. hengge
  Keywords: p-loop, wpd-loop, ptp, protein phosphatase, vanadate, divanadate, membrane, outer membrane, plasmid, secreted, virulence
  
• 3faa.pdb. transferase 16-nov-08 3faa F
  Title: crystal structure of tgfbri complexed with a 2- aminoimidazole inhibitor
  Author: p. a. boriack-sjodin, c. fitch
  Keywords: phosphoprotein, polymorphism, receptor, serine/threonine-protein kinase, transferase, transmembrane
  
• 3fak.pdb. hydrolase 17-nov-08 3fak Cl Na
  Title: structural and functional analysis of a hormone-sensitive lipase like este5 from a metagenome library
  Author: k. y. hwang, k. h. nam
  Keywords: este5, esterase, lipase, hydrolase
  
• 3fbm.pdb. virus 19-nov-08 3fbm Ca
  Title: d431n mutant vp2 protein of infectious bursal disease virus; derived t=1 particles
  Author: n. irigoyen, d. garriga, a. navarro, n. verdaguer, j. f. rodriguez, j. r. caston
  Keywords: autoproteolytic activity, capsid maturation, virus assembly, ibdv
  
• 3fbr.pdb. transcription 19-nov-08 3fbr
  Title: structure of hipa-amppnp-peptide
  Author: m. a. schumacher
  Keywords: multidrug tolerance hipa, hipb, dna, transcription
  
• 3fc6.pdb. transcription 21-nov-08 3fc6 Cl F
  Title: hrxralpha & mlxralpha with an indole pharmacophore, sb786875
  Author: d. g. washburn, t. h. hoang, n. campobasso, a. smallwood, d. j. parks, c. l. webb, k. frank, m. nord, c. duraiswami, c. evans, m. jaye, s. k. thompson
  Keywords: zinc, zinc-finger
  
• 3fds.pdb. transferase 26-nov-08 3fds
  Title: structural insight into recruitment of translesion dna polymerase dpo4 to sliding clamp pcna
  Author: h. ling
  Keywords: cytoplasm, dna damage, dna repair, dna replication, dna-binding, dna-directed dna polymerase, magnesium, metal-binding, mutator protein, nucleotidyltransferase, transferase
  
• 3fe4.pdb. lyase 27-nov-08 3fe4 Mg
  Title: crystal structure of human carbonic anhydrase vi
  Author: e. s. pilka, g. kochan, e. krysztofinska, j. muniz, w. w. yue, a. k. roos, f. von delft, c. h. arrowsmith, j. weigelt, a. edwards, c. bountra, u. oppermann, structural genomics consortium (sgc)
  Keywords: secretion, metal binding, structural genomics, structural genomics consortium, sgc, glycoprotein, lyase, metal-binding, polymorphism, secreted, zinc
  
• 3ff1.pdb. isomerase 01-dec-08 3ff1 Na Se
  Title: structure of glucose 6-phosphate isomerase from staphylococcus aureus
  Author: s. m. anderson, j. s. brunzelle, o. onopriyenko, s. peterson, w. f. anderson, a. savchenko, center for structural genomics of infectious diseases (csgid)
  Keywords: rossmann fold, glucose-6-phosphate isomerase like protein, cytoplasm, gluconeogenesis, glycolysis, isomerase, structural genomics, center for structural genomics of infectious diseases, csgid
  
• 3fgp.pdb. transferase 08-dec-08 3fgp
  Title: 2.05 a crystal structure of cysm from mycobacterium tuberculosis - open and closed conformations
  Author: d. agren, r. schnell, g. schneider
  Keywords: cysm, tuberculosis, cyso, o- phosphoserine, amino-acid biosynthesis, cysteine biosynthesis, pyridoxal phosphate, transferase
  
• 3fh9.pdb. oxygen transport 09-dec-08 3fh9 Fe
  Title: crystal structure determination of indian flying fox (pteropus giganteus) at 1.62 a resolution
  Author: p. sathyamoorthy, k. neelagandan, m. balasubramanian, m. thenmozhi, m. n. ponnuswamy
  Keywords: pteropus giganteus, high oxygen affinity animal, volant mammal, allosteric mechanism, oxygen transport
  
• 3fi8.pdb. transferase 11-dec-08 3fi8 Mg
  Title: crystal structure of choline kinase from plasmodium falciparum, pf14_0020
  Author: a. k. wernimont, j. c. izarro, j. d. artz, m. f. amaya, t. xiao, j. lew, g. wasney, g. senesterra, i. kozieradzki, d. cossar, m. vedadi, m. schapira, a. bochkarev, c. h. arrowsmith, c. bountra, j. weigelt, a. m. edwards, r. hui, t. hills, structural genomics consortium (sgc)
  Keywords: malaria, structural genomics, structural genomics consortium, sgc, kinase, transferase
  
• 3fid.pdb. membrane protein 11-dec-08 3fid Zn
  Title: lpxr from salmonella typhimurium
  Author: l. rutten, p. gros
  Keywords: membrane protein
  
• 3fju.pdb. hydrolase/hydrolase inhibitor 15-dec-08 3fju Zn Na As
  Title: ascaris suum carboxypeptidase inhibitor in complex with human carboxypeptidase a1
  Author: l. sanglas, f. x. aviles, r. huber, f. x. gomis-ruth, j. l. arolas
  Keywords: metalloenzyme inhibitor, metalloprotease inhibitor, protease inhibitor, hydrolase/hydrolase inhibitor complex
  
• 3fke.pdb. rna binding protein 16-dec-08 3fke
  Title: structure of the ebola vp35 interferon inhibitory domain
  Author: g. k. amarasinghe, d. w. leung, n. d. ginder, r. b. honzatko, j. nix, c. f. basler, d. b. fulton
  Keywords: coiled coil, interferon antiviral system evasion, rna replication, rna-binding, transcription, rna binding protein
  
• 3fld.pdb. hydrolase 18-dec-08 3fld
  Title: crystal structure of the trai c-terminal domain
  Author: l. m. guogas, s. a. kennedy, m. r. redinbo
  Keywords: alternative initiation, atp- binding, conjugation, dna-binding, helicase, hydrolase, nucleotide-binding, plasmid, atp-binding
  
• 3fll.pdb. transport protein 18-dec-08 3fll Fe
  Title: crystal structure of e55q mutant of nitrophorin 4
  Author: w. r. montfort, a. weichsel
  Keywords: lipocalin, heme, mutant, ammonia, iron, metal- binding, secreted, vasoactive, vasodilator, transport protein
  
• 3fm0.pdb. biosynthetic protein 19-dec-08 3fm0
  Title: crystal structure of wd40 protein ciao1
  Author: a. dong, m. ravichandran, l. crombet, d. cossar, a. m. edwards, c. h. arrowsmith, j. weigelt, c. bountra, a. bochkarev, j. min, h. ouyang, structural genomics consortium (sgc)
  Keywords: sgc,wd40,ciao1, nucleus, wd repeat, biosynthetic protein, structural genomics, structural genomics consortium
  
• 3fms.pdb. transcription regulator 22-dec-08 3fms He Hg Ni Se
  Title: crystal structure of tm0439, a gntr transcriptional regulator
  Author: m. zheng, d. r. cooper, m. yu, l-w. hung, u. derewenda, z. derewenda, integrated center for structure and function innovation (isfi)
  Keywords: transcription regulation, transcription regulator, transcription
  
• 3fnd.pdb. hydrolase 24-dec-08 3fnd Se
  Title: crystal structure of a chitinase from bacteroides thetaiotaomicron
  Author: l. damodharan, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
  Keywords: tim-barrel, 11092m, structural genomics, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, glycosidase, hydrolase
  
• 3fos.pdb. transferase 31-dec-08 3fos Se
  Title: crystal structure of two-component sensor histidine kinase domain from bacillus subtilis subsp. subtilis str. 168
  Author: r. wu, m. schiffer, m. gu, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: bacillus subtilis subsp. subtilis str. 168, psi-2, protein structure initiative, structural genomics, midwest center for structural genomics (mcsg), kinase, phosphoprotein, transferase
  
• 3fq5.pdb. dna 07-jan-09 3fq5 Mn
  Title: crystal structure of d(cacgcg).d(cgcgtg) with 10mm mncl2
  Author: s. venkadesh, r. kannan, p. k. mandal, n. gautham
  Keywords: dna
  
• 3fqb.pdb. dna 07-jan-09 3fqb Ba
  Title: barium interactions with z-dna
  Author: p. k. mandal, s. venkadesh, n. vinayak, n. gautham
  
  
• 3fsd.pdb. structural genomics, unknown function 09-jan-09 3fsd Se
  Title: crystal structure of ntf2-like protein of unknown function in nutrient uptake (yp_427473.1) from rhodospirillum rubrum atcc 11170 at 1.70 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: ntf2-like protein of unknown function in nutrient uptake, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, unknown function
  
• 3fsh.pdb. ligase 09-jan-09 3fsh
  Title: crystal structure of the ubiquitin conjugating enzyme ube2g2 bound to the g2br domain of ubiquitin ligase gp78
  Author: d. tu, a. t. brunger
  Keywords: ligase, ubl conjugation pathway, alternative splicing, endoplasmic reticulum, membrane, metal-binding, phosphoprotein, polymorphism, receptor, transmembrane, zinc, zinc-finger
  
• 3fup.pdb. transferase 14-jan-09 3fup
  Title: crystal structures of jak1 and jak2 inhibitor complexes
  Author: n. k. williams, r. s. bamert, o. patel, e. fantino, j. rossjohn, i. s. lucet
  Keywords: tyrosine-protein kinase
  
• 3fvd.pdb. hydrolase 15-jan-09 3fvd Mg
  Title: crystal structure of a member of enolase superfamily from roseovarius nubinhibens ism complexed with magnesium
  Author: v. n. malashkevich, m. rutter, k. t. bain, c. lau, s. ozyurt, d. smith, s. wasserman, m. j. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
  Keywords: crystal structure, hydrolase, psi-2, protein structure initiative, new york sgx research center for structural genomics, nysgxrc
  
• 3fvw.pdb. structural genomics, unknown function 16-jan-09 3fvw Se
  Title: crystal structure of the q8dwd8_strmu protein from streptococcus mutans. northeast structural genomics consortium target smr99.
  Author: s. m. vorobiev, m. abashidze, r. l. belote, e. l. foote, c. ciccosanti, h. janjua, r. xiao, t. acton, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
  Keywords: putative nad(p)h-dependent fmn reductase, smr99, nesg, structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, unknown function
  
• 3fwz.pdb. membrane protein 19-jan-09 3fwz Mg Se
  Title: crystal structure of trka-n domain of inner membrane protein ybal from escherichia coli
  Author: c. chang, l. bigelow, k. buck, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: transmembrane, transport, membrane protein
  
• 3fy6.pdb. structural genomics, unknown function 21-jan-09 3fy6 Se
  Title: structure from the mobile metagenome of v. cholerae. integron cassette protein vch_cass3
  Author: c. n. deshpande, v. sureshan, s. j. harrop, y. boucher, x. xu, h. cui, a. edwards, a. savchenko, a. joachimiak, k. tan, h. w. stokes, p. m. g. curmi, b. c. mabbutt, midwest center for structural genomics (mcsg)
  Keywords: integron cassette protein, vibrio cholerae, oyster pond, woodshole,usa, unknown function, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg
  
• 3fyf.pdb. structural genomics, unknown function 22-jan-09 3fyf
  Title: crystal structure of uncharacterized protein bvu_3222 from bacteroides vulgatus
  Author: y. patskovsky, j. b. bonnano, s. ozyurt, m. rutter, s. chang, c. groshong, j. koss, j. m. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
  Keywords: periplasmic, psi-2, protein structure initiative, new york structural genomix research consortium nysgxrc, new york sgx research center for structural genomics, unknown function
  
• 3fyn.pdb. structural genomics, unknown function 22-jan-09 3fyn Mg Se
  Title: crystal structure from the mobile metagenome of cole harbour salt marsh: integron cassette protein hfx_cass3
  Author: v. sureshan, c. n. deshpande, s. j. harrop, m. kudritska, j. e. koenig, e. evdokimova, j. osipiuk, a. m. edwards, a. savchenko, a. joachimiak, w. f. doolittle, h. w. stokes, p. m. g. curmi, b. c. mabbutt, midwest center for structural genomics (mcsg)
  Keywords: mobile metagenome, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
  
• 3fz4.pdb. oxidoreductase 23-jan-09 3fz4 Na Se
  Title: the crystal structure of a possible arsenate reductase from streptococcus mutans ua159
  Author: k. tan, c. hatzos, g. shackelford, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: arsenate reductase, streptococcus mutans ua159, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, oxidoreductase
  
• 3fzq.pdb. hydrolase 26-jan-09 3fzq Na Se
  Title: crystal structure of putative haloacid dehalogenase-like hydrolase (yp_001086940.1) from clostridium difficile 630 at 2.10 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: putative haloacid dehalogenase-like hydrolase, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, hydrolase
  
• 3g07.pdb. transferase 27-jan-09 3g07 Se
  Title: methyltransferase domain of human bicoid-interacting protein 3 homolog (drosophila)
  Author: h. wu, l. dombrovski, w. tempel, a. mccarthy, p. loppnau, c. bountra, j. weigelt, c. h. arrowsmith, a. m. edwards, a. bochkarev, j. min, a. n. plotnikov, h. park, structural genomics consortium (sgc)
  Keywords: methyltransferase, phosphoprotein, s-adenosyl-l-methionine, transferase
  
• 3g0j.pdb. transcription 28-jan-09 3g0j
  Title: crystal structure of the fifth bromodomain of human poly- bromodomain containing protein 1 (pb1)
  Author: p. filippakopoulos, t. keates, s. picaud, f. von delft, c. h. arrowsmith, a. m. edwards, j. weigelt, c. bountra, s. knapp, structural genomics consortium (sgc)
  Keywords: polybromo 1 isoform 1, baf180, polybromo-1d, pbrm1, brg1-associated factor 180, structural genomics, structural genomics consortium, sgc, transcription
  
• 3g0k.pdb. structural genomics, unknown function 28-jan-09 3g0k Ca Se
  Title: crystal structure of protein of unknown function with a cystatin-like fold (yp_498150.1) from novosphingobium aromaticivorans dsm 12444 at 1.30 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: unknown function
  
• 3g0l.pdb. transcription 28-jan-09 3g0l
  Title: crystal structure of human bromodomain adjacent to zinc finger domain 2b (baz2b)
  Author: p. filippakopoulos, t. keates, e. salah, n. burgess-brown, f. von delft, c. h. arrowsmith, a. m. edwards, j. weigelt, c. bountra, s. knapp, structural genomics consortium (sgc)
  Keywords: bromodomain adjacent to zinc finger domain, 2b, kiaa1476, walp4, structural genomics consortium, sgc, transcription
  
• 3g0o.pdb. oxidoreductase 28-jan-09 3g0o Cl Se
  Title: crystal structure of 3-hydroxyisobutyrate dehydrogenase (ygbj) from salmonella typhimurium
  Author: s. eswaramoorthy, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
  Keywords: new york sgx research center for structural genomics
  
• 3g0s.pdb. lyase 28-jan-09 3g0s Cl Mg
  Title: dihydrodipicolinate synthase from salmonella typhimurium lt2
  Author: j. osipiuk, n. maltseva, j. stam, w. f. anderson, a. joachimiak, center for structural genomics of infectious diseases (csgid)
  Keywords: csgid
  
• 3g0t.pdb. transferase 28-jan-09 3g0t Cl Na Se
  Title: crystal structure of putative aspartate aminotransferase (np_905498.1) from porphyromonas gingivalis w83 at 1.75 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: putative aspartate aminotransferase, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, aminotransferase, transferase
  
• 3g12.pdb. lyase 29-jan-09 3g12
  Title: crystal structure of a putative lactoylglutathione lyase from bdellovibrio bacteriovorus
  Author: y. patskovsky, m. madegowda, m. gilmore, s. chang, m. maletic, d. smith, j. m. sauder, s. k. burley, s. swaminathan, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
  Keywords: glyoxalase, bleomycin resistance, psi-2, nysgxrc, structural genomics, protein structure initiative, new york sgx research center for structural genomics
  
• 3g13.pdb. recombination 29-jan-09 3g13 Na Se
  Title: crystal structure of putative conjugative transposon recombinase from clostridium difficile
  Author: a. bagaria, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
  Keywords: psi-ii, target 11223f, structural genomics, protein structure initiative, new york sgx research center for structural genomics, nysgxrc, recombination
  
• 3g15.pdb. transferase 29-jan-09 3g15 Mg
  Title: crystal structure of human choline kinase alpha in complex with hemicholinium-3 and adp
  Author: b. hong, w. tempel, w. m. rabeh, f. mackenzie, c. h. arrowsmith, a. m. edwards, c. bountra, j. weigelt, a. bochkarev, h. park, structural genomics consortium (sgc)
  Keywords: choline kinase, structural genomics consortium, sgc, hemicholinium-3, alternative splicing, cytoplasm, kinase, transferase
  
• 3g1t.pdb. oxidoreductase 30-jan-09 3g1t Mg
  Title: crystal structure of short chain dehydrogenase from salmonella enterica subsp. enterica serovar typhi str. ct18
  Author: v. n. malashkevich, r. toro, m. j. sauder, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
  Keywords: new york sgx research center for structural genomics, oxidoreductase
  
• 3g1u.pdb. hydrolase 30-jan-09 3g1u
  Title: crystal structure of leishmania major s- adenosylhomocysteine hydrolase
  Author: m. i. siponen, m. welin, c. h. arrowsmith, h. berglund, c. bountra, r. collins, l. g. dahlgren, a. m. edwards, s. flodin, a. flores, s. graslund, m. hammarstrom, a. johansson, i. johansson, t. karlberg, t. kotenyova, l. lehtio, m moche, m. e. nilsson, p. nordlund, t. nyman, c. persson, j sagemark, p. schutz, a. g. thorsell, l. tresaugues, s. van den berg, j. weigelt, m. wisniewska, h. schueler, structural genomics consortium (sgc)
  Keywords: structural genomics, structural genomics of human proteins, hydrolase, oxidoreductase, structural genomics consortium, sgc
  
• 3g23.pdb. hydrolase 30-jan-09 3g23 Se
  Title: crystal structure of ld-carboxypeptidase a (yp_496704.1) from novosphingobium aromaticivorans dsm 12444 at 1.89 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: ld-carboxypeptidase a, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, carboxypeptidase, hydrolase
  
• 3g3s.pdb. transferase 02-feb-09 3g3s Na Se As
  Title: crystal structure of gcn5-related n-acetyltransferase-like protein (zp_00874857) (zp_00874857.1) from streptococcus suis 89/1591 at 1.80 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: transferase