Recent PDB releases or updates: week of 10 October 2008

• 1kn1.pdb. electron transport 18-dec-01 1kn1
  Title: crystal structure of allophycocyanin
  Author: d. c. liang, j. y. liu, t. jiang, j. p. zhang, w. r. chang
  
  
• 1p85.pdb. ribosome 06-may-03 1p85 (cryo-electron microscopy)
  Title: real space refined coordinates of the 50s subunit fitted into the low resolution cryo-em map of the ef-g.gtp state of e. coli 70s ribosome
  Author: h. gao, j. sengupta, m. valle, a korostelev, n. eswar, s. m. stagg, p. van roey, r. k. agrawal, s. t. harvey, a. sali, m. s. chapman, j. frank
  Keywords: ratchet-like movement, real-space refinement
  
• 1y59.pdb. hydrolase 02-dec-04 1y59 Ca
  Title: dianhydrosugar-based benzamidine, factor xa specific inhibitor in complex with bovine trypsin mutant
  Author: a. di fenza, a. heine, g. klebe
  Keywords: serine protease, serine proteinase
  
• 1y5a.pdb. hydrolase 02-dec-04 1y5a Ca
  Title: dianhydrosugar-based benzamidine, factor xa specific inhibitor in complex with bovine trypsin mutant
  Author: a. di fenza, a. heine, g. klebe
  Keywords: serine protease, serine proteinase
  
• 1y5b.pdb. hydrolase 02-dec-04 1y5b Ca
  Title: dianhydrosugar-based benzamidine, factor xa specific inhibitor in complex with bovine trypsin mutant
  Author: a. di fenza, a. heine, g. klebe
  Keywords: serine protease, serine proteinase
  
• 1y5u.pdb. hydrolase 03-dec-04 1y5u Ca
  Title: dianhydrosugar-based benzamidine, factor xa specific inhibitor in complex with bovine trypsin mutant
  Author: a. di fenza, a. heine, g. klebe
  Keywords: serine protease, serine proteinase
  
• 2fj1.pdb. transcription regulator 30-dec-05 2fj1 Cl Ni
  Title: crystal structure analysis of tet repressor (class d) in complex with 7-chlortetracycline-nickel(ii)
  Author: p. orth, w. saenger, g. j. palm, w. hinrichs
  Keywords: helix-turn-helix, metal coordination
  
• 2h5m.pdb. transferase 26-may-06 2h5m He Hg Ho (NMR, 20 structures)
  Title: nmr solution structure of a gcn5-like putative n- acetyltransferase from staphylococcus aureus complexed with acetyl-coa. northeast structural genomics consortium target zr31
  Author: j. r. cort, t. a. ramelot, t. b. acton, l. ma, r. b. xiao, g. t. montelione, m. a. kennedy, northeast structural genomics consortium (nesg)
  Keywords: n-acetyltransferase domain, structural genomics, psi- 2, protein structure initiative, northeast structural genomics consortium, nesg
  
• 2hto.pdb. deoxyribonucleic acid 26-jul-06 2hto Ru
  Title: ruthenium hexammine ion interactions with z-dna
  Author: d. bharanidharan, s. thiyagarajan, n. gautham
  Keywords: double helix
  
• 2htt.pdb. deoxyribonucleic acid 26-jul-06 2htt Ru
  Title: ruthenium hexammine ion interactions with z-dna
  Author: d. bharanidharan, s. thiyagarajan, n. gautham
  Keywords: double helix
  
• 2jki.pdb. chaperone 28-aug-08 2jki
  Title: complex of hsp90 n-terminal and sgt1 cs domain
  Author: m. zhang, l. h. pearl
  Keywords: stress response, chaperone
  
• 2jnh.pdb. ligase 24-jan-07 2jnh He Hg (NMR, 15 structures)
  Title: solution structure of the uba domain from cbl-b
  Author: c. zhou, z. zhou, d. lin, h. hu
  Keywords: cbl-b, nmr, ligase
  
• 2jpy.pdb. antimicrobial protein 24-may-07 2jpy Hg (NMR, 10 structures)
  Title: phylloseptin-2
  Author: j. m. resende, c. mendonca moraes, f. c. l. almeida, m. v. prates, a. cesar, a. valente, m. p. bemquerer, d. pilo-veloso, b. bechinger
  Keywords: alpha helix, amphipathic character, c-terminal carboxyamidation, antimicrobial protein
  
• 2jq0.pdb. antimicrobial protein 25-may-07 2jq0 Hg (NMR, 10 structures)
  Title: phylloseptin-1
  Author: j. m. resende, c. mendonca moraes, f. c. l. almeida, m. v. prates, a. cesar, a. valente, m. p. bemquerer, d. pilo-veloso, b. bechinger
  Keywords: alpha-helix, amphipathic character, c-terminal carboxyamidation, antimicrobial protein
  
• 2jq1.pdb. antimicrobial protein 25-may-07 2jq1 Hg (NMR, 10 structures)
  Title: phylloseptin-3
  Author: j. m. resende, c. mendonca moraes, f. c. l. almeida, m. v. prates, a. cesar, a. valente, m. p. bemquerer, d. pilo-veloso, b. bechinger
  Keywords: alpha-helix, amphipathic character, c-terminal carboxyamidation, antimicrobial protein
  
• 2jws.pdb. de novo protein 24-oct-07 2jws He Hg (NMR, 20 structures)
  Title: solution nmr structures of two designed proteins with 88% sequence identity but different fold and function
  Author: y. he, y. chen, p. alexander, p. bryan, j. orban
  Keywords: folding, nmr, protein design, protein structure, de novo protein
  
• 2jwu.pdb. de novo protein 25-oct-07 2jwu He Hg (NMR, 20 structures)
  Title: solution nmr structures of two designed proteins with 88% sequence identity but different fold and function
  Author: y. he, y. chen, p. alexander, p. bryan, j. orban
  Keywords: folding, nmr, protein design, protein structure, de novo protein
  
• 2jyf.pdb. rna/rna 13-dec-07 2jyf Ho (NMR, 10 structures)
  Title: tetraloop-receptor rna complex
  Author: x. zuo, j. wang, t. r. foster, c. d. schwieters, d. m. tiede
  Keywords: rna:rna complex, tetraloop-receptor, gaaa- tetraloop, rna global structure, complex interface, rna/rna complex
  
• 2jyh.pdb. rna/rna 13-dec-07 2jyh Ho (NMR, 5 structures)
  Title: rigid-body refinement of the tetraloop-receptor rna complex
  Author: x. zuo, j. wang, t. r. foster, c. d. schwieters, d. m. tiede
  Keywords: rna/rna complex, tetraloop-receptor, gaaa- tetraloop, rna global structure
  
• 2jyj.pdb. rna/rna 13-dec-07 2jyj Ho (NMR, 10 structures)
  Title: re-refining the tetraloop-receptor rna-rna complex using nmr-derived restraints and xplor-nih (2.18)
  Author: x. zuo, j. wang, t. r. foster, c. d. schwieters, d. m. tiede, s. e. butcher, y. wang
  Keywords: rna/rna complex, tetraloop-receptor, gaaa- tetraloop, rna global structure
  
• 2k1o.pdb. gene regulation 11-mar-08 2k1o He Hg (NMR, 20 structures)
  Title: nmr structure of helicobacter pylori jhp0511 (hp0564).
  Author: b. n. borin, a. m. krezel
  Keywords: repressor, transcriptional regulator, dna-binding, ribbon-helix-helix, hp0564, jhp0511, unknown function, gene regulation
  
• 2k2f.pdb. metal binding protein 01-apr-08 2k2f He Hg Ca (NMR, 20 structures)
  Title: solution structure of ca2+-s100a1-ryrp12
  Author: n. t. wright, k. m. varney, d. j. weber
  Keywords: cytoplasm, metal- binding, zinc, metal binding protein
  
• 2k56.pdb. unknown function 26-jun-08 2k56 He Hg (NMR, 20 structures)
  Title: bank vole prion protein (121-231)
  Author: b. christen, s. hornemann, k. wuthrich
  Keywords: membrane, unknown function
  
• 2k60.pdb. signaling protein 02-jul-08 2k60 He Hg Ca (NMR, 20 structures)
  Title: nmr structure of calcium-loaded stim1 ef-sam
  Author: p. b. stathopulos, m. ikura
  Keywords: ion transport, membrane, phosphoprotein, transmembrane, transport, transport protein, signaling protein
  
• 2k6o.pdb. antimicrobial protein 14-jul-08 2k6o He Hg (NMR, 4 structures)
  Title: human ll-37 structure
  Author: g. wang
  Keywords: antimicrobial protein
  
• 2k73.pdb. membrane protein, oxidoreductase 01-aug-08 2k73 He Hg (NMR, 20 structures)
  Title: solution nmr structure of integral membrane protein dsbb
  Author: y. zhou, t. cierpicki, r. h. flores jimenez, s. m. lukasik, j. f. ellena, d. s. cafiso, h. kadokura, j. beckwith, j. h. bushweller
  Keywords: disulfide bond, redox enzyme, dsbb, chaperone, electron transport, inner membrane, oxidoreductase, redox-active center, transmembrane, transport
  
• 2k74.pdb. membrane protein, oxidoreductase 01-aug-08 2k74 He Hg (NMR, 20 structures)
  Title: solution nmr structure of dsbb-ubiquinone complex
  Author: y. zhou, t. cierpicki, r. h. flores jimenez, s. m. lukasik, j. f. ellena, d. s. cafiso, h. kadokura, j. beckwith, j. h. bushweller
  Keywords: disulfide bond, redox enzyme, dsbb, ubiquinone, oxidative protein folding, chaperone, electron transport, inner membrane, oxidoreductase, redox-active center, transmembrane, transport
  
• 2k7e.pdb. ribonucleic acid 09-aug-08 2k7e Ho (NMR, 10 structures)
  Title: nmr structure of the human trnalys3 bound to the hiv genome loop i
  Author: y. bilbille, f. p. a. vendeix, r. guenther, a. malkiewicz, x. ariza, j. vilarrasa, p. agris
  Keywords: nmr, trnalys3, pseudouridine, hiv, 2-thiouridine, s2u, psu, modifications
  
• 2k7i.pdb. structural genomics, unknown function 12-aug-08 2k7i He Hg (NMR, 20 structures)
  Title: solution nmr structure of protein atu0232 from agrobacterium tumefaciens. northeast structural genomics consortium (nesg) target att3. ontario center for structural proteomics target atc0223.
  Author: a. lemak, s. srisailam, a. yee, s. bansal, a. semesi, j. prestegard, g. t. montelione, c. arrowsmith, northeast structural genomics consortium (nesg)
  Keywords: swapped dimer. psi2, structural genomics, unknown function, protein structure initiative, northeast structural genomics consortium, nesg
  
• 2oy7.pdb. membrane protein 21-feb-07 2oy7
  Title: the crystal structure of ospa mutant
  Author: k. makabe, v. terechko, a. koide, s. koide
  Keywords: membrane protein
  
• 2oy8.pdb. membrane protein 21-feb-07 2oy8
  Title: the crystal structure of ospa mutant
  Author: k. makabe, v. terechko, a. koide, s. koide
  Keywords: membrane protein
  
• 2oyb.pdb. membrane protein 21-feb-07 2oyb
  Title: the crystal structure of ospa mutant
  Author: k. makabe, m. biancalana, v. terechko, s. koide
  Keywords: membrane protein
  
• 2pw4.pdb. structural genomics, unknown function 10-may-07 2pw4 Zn Na Ni Se
  Title: crystal structure of protein of unknown function duf1470 (yp_510353.1) from jannaschia sp. ccs1 at 1.45 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: protein of unknown function duf1470, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2
  
• 2r59.pdb. hydrolase 03-sep-07 2r59 Zn Yb
  Title: leukotriene a4 hydrolase complexed with inhibitor rb3041
  Author: f. tholander, j. z. haeggstrom, m. thunnissen, a. muroya, b. p. roques, m. c. fournie-zaluski
  Keywords: analogue peptide, hydrolysis, alternative splicing, cytoplasm, hydrolase, leukotriene biosynthesis, metal-binding, metalloprotease, multifunctional enzyme, protease, zinc
  
• 2rbm.pdb. hydrolase 19-sep-07 2rbm Ca
  Title: crystal structure of staphylococcal nuclease variant delta+phs i72k at cryogenic temperature
  Author: v. s. khangulov, j. l. schlessman, e. b. garcia-moreno
  Keywords: hyperstable variant, hydrolase, pdtp, calcium, endonuclease, metal-binding, secreted, zymogen
  
• 2rem.pdb. oxidoreductase 26-sep-07 2rem
  Title: crystal structure of oxidoreductase dsba from xylella fastidiosa
  Author: f. c. rinaldi, b. g. guimaraes
  Keywords: dsba, thioredoxin fold, redox- active center
  
• 2rf8.pdb. hydrolase 28-sep-07 2rf8
  Title: crystal structure of the mutant c2a conjugated bile acid hydrolase from clostridium perfringens
  Author: m. rossmann, w. saenger
  Keywords: bile salt hydrolase, cbah, bsh, ntn-hydrolase
  
• 2rg9.pdb. hydrolase, toxin 03-oct-07 2rg9 Cl
  Title: crystal structure of viscum album mistletoe lectin i in native state at 1.95 a resolution, comparison of structure active site conformation in ricin and in viscumin
  Author: n. u. karpechenko, v. i. timofeev, a. g. gabdoulkhakov, a. m. mikhailov
  Keywords: glycoprotein, hydrolase, lectin, pharmaceutical, plant defense, polymorphism, protein synthesis inhibitor, toxin
  
• 2rgs.pdb. immune system 05-oct-07 2rgs
  Title: fc-fragment of monoclonal antibody igg2b from mus musculus
  Author: p. kolenko, j. duskova, t. skalova, j. dohnalek, j. hasek
  Keywords: immunoglobulin, glycosylation, immune system
  
• 2rh1.pdb. membrane protein / hydrolase 05-oct-07 2rh1
  Title: high resolution crystal structure of human b2-adrenergic g protein-coupled receptor
  Author: v. cherezov, d. m. rosenbaum, m. a. hanson, s. g. f. rasmussen, f. s. thian, t. s. kobilka, h. j. choi, p. kuhn, w. i. weis, b. k. kobilka, r. c. stevens
  Keywords: 7tm, adrenergic, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein, membrane protein / hydrolase complex
  
• 2roq.pdb. transferase 05-apr-08 2roq He Hg (NMR, 20 structures)
  Title: solution structure of the thiolation-thioesterase di-domain of enterobactin synthetase component f
  Author: d. p. frueh, h. arthanari, a. koglin, d. a. vosburg, a. e. bennett, c. t. walsh, g. wagner
  Keywords: iron, iron transport, ligase, multifunctional enzyme, phosphopantetheine, transferase, transport
  
• 2rpq.pdb. transcription 07-jul-08 2rpq He Hg (NMR, 20 structures)
  Title: solution structure of a sumo-interacting motif of mbd1- containing chromatin-associated factor 1 bound to sumo-3
  Author: n. sekiyama, t. ikegami, t. yamane, m. ikeguchi, y. uchimura, d. baba, m. ariyoshi, h. tochio, h. saitoh, m. shirakawa
  Keywords: transcription regulation
  
• 2v4i.pdb. transferase 22-sep-08 2v4i
  Title: structure of a novel n-acyl-enzyme intermediate of an n- terminal nucleophile (ntn) hydrolase, oat2
  Author: a. iqbal, i. j. clifton, c. j. schofield
  Keywords: acyl enzyme, transferase, ntn hydrolase, acyltransferase, ornithine acetyl transferase
  
• 2v4m.pdb. transferase 26-sep-08 2v4m Cl
  Title: the isomerase domain of human glutamine-fructose-6- phosphate transaminase 1 (gfpt1) in complex with fructose 6-phosphate
  Author: m. moche, l. lehtio, j. andersson, c. h. arrowsmith, h. berglund, r. collins, l. g. dahlgren, a. m. edwards, s. flodin, a. flores, s. graslund, m. hammarstrom, a. johansson, i. johansson, t. karlberg, t. kotenyova, m. e. nilsson, t. nyman, c. persson, j. sagemark, s. svensson, h. schueler, a. g. thorsell, l. tresaugues, j. uppenberg, s. van den berg, m. welin, m. wisniewska, j. weigelt, p. nordlund, m. wikstrom
  Keywords: aminotransferase, fructose 6-phosphate, alternative splicing, glutamine amidotransferase, dimer, isomerase, sis domains, transferase
  
• 2v4u.pdb. ligase 29-sep-08 2v4u
  Title: human ctp synthetase 2 - glutaminase domain in complex with 5-oxo-l-norleucine
  Author: m. welin, m. moche, j. andersson, c. h. arrowsmith, h. berglund, r. collins, l. g. dahlgren, a. m. edwards, s. flodin, a. flores, s. graslund, m. hammarstrom, a. johansson, i. johansson, t. karlberg, t. kotenyova, l. lehtio, m. e. nilsson, t. nyman, k. olesen, c. persson, j. sagemark, h. schueler, a. g. thorsell, l. tresaugues, s. van den berg, m. wisniewska, j. weigelt, m. wikstrom, p. nordlund
  Keywords: utp-- ammonia ligase 2
  
• 2vg2.pdb. transferase 07-nov-07 2vg2 Cl
  Title: rv2361 with ipp
  Author: j. h. naismith, w. wang, c. dong
  Keywords: cell cycle, cell shape, transferase, cell division, prenyl transferase, peptidoglycan synthesis
  
• 2vh3.pdb. unknown function 17-nov-07 2vh3 Zn
  Title: ranasmurfin
  Author: m. oke, r. y. ching, l. g. carter, k. a. johnson, h. liu, s. a. mcmahon, c. bloch jr, c. h. botting, m. a. walsh, a. a. latiff, m. w. kennedy, a. cooper, j. h. naismith
  Keywords: bisltq, unknown function
  
• 2vke.pdb. transcription 18-dec-07 2vke Cl Co
  Title: tet repressor class d complexed with cobalt and tetracycline
  Author: g. j. palm, w. hinrichs
  Keywords: metal-binding, helix-turn-helix, transcription regulator, transcription regulation, metal coordination, antibiotic resistance, cobalt, plasmid, repressor, magnesium, dna-binding
  
• 2vm8.pdb. signaling protein 24-jan-08 2vm8 Mg
  Title: human crmp-2 crystallised in the presence of mg
  Author: p. kursula
  Keywords: phosphoprotein, differentiation, crmp, cytoplasm, tim barrel, polymorphism, axonal pathfinding, developmental protein, signaling protein
  
• 2vpv.pdb. cell cycle 05-mar-08 2vpv
  Title: dimerization domain of mif2p
  Author: r. l. cohen, c. w. espelin, p. k. sorger, s. c. harrison, k. t. simons
  Keywords: mitosis, centromere, cell cycle, dna-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold, dimerization domain
  
• 2vwd.pdb. hydrolase 20-jun-08 2vwd Cl
  Title: nipah virus attachment glycoprotein
  Author: t. a. bowden, m. crispin, d. j. harvey, a. r. aricescu, j. m. grimes, e. y. jones, d. i. stuart
  Keywords: transmembrane, viral attachment, envelope protein, paramyxovirus, signal-anchor, hemagglutinin, niv, hev, nipah, hev-g, virus, niv-g, hendra, virion, membrane, henipavirus, glycoprotein
  
• 2vxg.pdb. gene regulation 04-jul-08 2vxg
  Title: crystal structure of the conserved c-terminal region of ge- 1
  Author: m. jinek, a. eulalio, a. lingel, s. helms, e. conti, e. izaurralde
  Keywords: edc4, hedls, mrna decay, p-body, gene regulation
  
• 2vy1.pdb. transcription 16-jul-08 2vy1
  Title: structure of leafy transcription factor from arabidopsis thaliana in complex with dna from ap1 promoter
  Author: c. hames, d. ptchelkine, c. grimm, e. thevenon, e. moyroud, f. gerard, j. l. martiel, r. benlloch, f. parcy, c. w. muller
  Keywords: polymorphism, transcription, developmental protein, transcription regulation, homeotic genes, differentiation, flower development, leafy, nucleus, activator, flowering, coiled coil
  
• 2vyy.pdb. oxygen transport 29-jul-08 2vyy Fe
  Title: mutant ala55trp of cerebratuls lacteus mini-hemoglobin
  Author: m. d. salter, k. nienhaus, g. u. nienhaus, s. dewilde, l. moens, a. pesce, m. nardini, m. bolognesi, j. s. olson
  Keywords: mini-hemoglobin, oxygen transport, heme, iron, transport, metal-binding
  
• 2vyz.pdb. oxygen transport 29-jul-08 2vyz Fe
  Title: mutant ala55phe of cerebratulus lacteus mini-hemoglobin
  Author: m. d. salter, k. nienhaus, g. u. nienhaus, s. dewilde, l. moens, a. pesce, m. nardini, m. bolognesi, j. s. olson
  Keywords: mini-hemoglobin, oxygen transport, heme, iron, transport, metal-binding
  
• 2vz1.pdb. oxidoreductase 29-jul-08 2vz1 Ca
  Title: premat-galactose oxidase
  Author: m. s. rogers, r. hurtado-guerrero, s. j. firbank, m. a. halcrow, d. m. dooley, s. e. v. phillips, p. f. knowles, m. j. mcpherson
  Keywords: copper, secreted, kelch repeat, metal-binding, galactose oxidase, anaerobic processing, thioether bond, thio-ether bond
  
• 2vz3.pdb. oxidoreductase 29-jul-08 2vz3 Cu
  Title: bleached galactose oxidase
  Author: m. s. rogers, r. hurtado-guerrero, s. j. firbank, m. a. halcrow, d. m. dooley, s. e. v. phillips, p. f. knowles, m. j. mcpherson
  Keywords: copper, secreted, kelch repeat, metal-binding, galactose oxidase, anaerobic processing, thioether bond, thio-ether bond
  
• 2w0n.pdb. transferase 19-aug-08 2w0n He Hg (NMR, 10 structures)
  Title: plasticity of pas domain and potential role for signal transduction in the histidine-kinase dcus
  Author: m. etzkorn, h. kneuper, p. duennwald, v. vijayan, j. kraemer, c. griesinger, s. becker, g. unden, m. baldus
  Keywords: two-component regulatory system, pas, dcus, kinase, membrane, transferase, solid state nmr, cell inner membrane, cell membrane, transmembrane, phosphoprotein
  
• 2z7e.pdb. biosynthetic protein 20-aug-07 2z7e Fe
  Title: crystal structure of aquifex aeolicus iscu with bound [2fe- 2s] cluster
  Author: y. shimomura, k. wada, y. takahashi, k. fukuyama
  Keywords: iron, biosynthesis, [2fe-2s], isc, iscu, nifu, asymmetric trimer, three conserved cys, biosynthetic protein
  
• 2zah.pdb. virus 05-oct-07 2zah Ca
  Title: x-ray structure of melon necrotic spot virus
  Author: y. wada, t. tsukihara, t. omura
  Keywords: coat protein, b-annulus, tombusvirus, carmovirus, fungal vector, mnsv, capsid protein, icosahedral virus
  
• 2zan.pdb. protein transport 08-oct-07 2zan Mg
  Title: crystal structure of mouse skd1/vps4b atp-form
  Author: m. inoue, m. kawasaki, h. kamikubo, m. kataoka, r. kato, t. yoshimori, s. wakatsuki
  Keywords: vps4b, aaa atpase, atp-binding, coiled coil, membrane, nucleotide-binding, phosphorylation, protein transport, transport
  
• 2zao.pdb. protein transport 08-oct-07 2zao
  Title: crystal structure of mouse skd1/vps4b adp-form
  Author: m. inoue, m. kawasaki, h. kamikubo, m. kataoka, r. kato, t. yoshimori, s. wakatsuki
  Keywords: vps4b, aaa atpase, atp-binding, coiled coil, membrane, nucleotide-binding, phosphorylation, protein transport, transport
  
• 2zas.pdb. transcription 09-oct-07 2zas
  Title: crystal structure of human estrogen-related receptor gamma ligand binding domain complex with 4-alpha-cumylphenol, a bisphenol a derivative
  Author: a. matsushima, y. kakuta, t. teramoto, y. shimohigashi
  Keywords: bpa, 4-alpha-cumylphenol, nuclear receptor, transcription, activator, alternative splicing, dna-binding, metal-binding, nucleus, polymorphism, transcription regulation, zinc, zinc-finger
  
• 2zbs.pdb. transcription 27-oct-07 2zbs
  Title: crystal structure of human estrogen-related receptor gamma ligand binding domain apo form
  Author: a. matsushima, y. kakuta, t. teramoto, y. shimohigashi
  Keywords: nuclear receptor, transcription, apo form, activator, alternative splicing, dna-binding, metal-binding, nucleus, polymorphism, transcription regulation, zinc, zinc- finger
  
• 2zca.pdb. structural genomics, unknown function 08-nov-07 2zca Se
  Title: crystal structure of tthb189, a crispr-associated protein, cse2 family from thermus thermophilus hb8
  Author: y. agari, a. shinkai, s. yokoyama, s. kuramitsu, riken structural genomics/proteomics initiative (rsgi)
  Keywords: unknown function
  
• 2zka.pdb. oxidoreductase 13-mar-08 2zka Na
  Title: urate oxidase complexed with 8-azaxanthine under 1.0 mpa oxygen pressure
  Author: n. colloc'h, l. gabison, m. chiadmi, j. h. abraini, t. prange
  Keywords: gaz-protein complex, t-fold domaun, acetylation, oxidoreductase, peroxisome, purine metabolism, tetramer
  
• 2zkb.pdb. oxidoreductase 14-mar-08 2zkb Na
  Title: urate oxidase complexed with 8-azaxanthine under 2.5 mpa oxygen pressure
  Author: n. colloc'h, l. gabison, m. chiadmi, j. h. abraini, t. prange
  Keywords: gaz-protein complex, t-fold domain, acetylation, oxidoreductase, peroxisome, purine metabolism, tetramer
  
• 2zlb.pdb. transferase 04-apr-08 2zlb
  Title: crystal structure of apo form of rat catechol-o- methyltransferase
  Author: e. tsuji
  Keywords: transmembrane, transferase (methyltransferase)
  
• 2zmm.pdb. hydrolase 19-apr-08 2zmm Cl Mg Br
  Title: crystal structure of ptp1b-inhibitor complex
  Author: w. xu, j. wu
  Keywords: protein-inhibitor complex, acetylation, endoplasmic reticulum, hydrolase, membrane, oxidation, phosphoprotein, polymorphism, protein phosphatase
  
• 2zn7.pdb. hydrolase 22-apr-08 2zn7 Br
  Title: crystal structures of ptp1b-inhibitor complexes
  Author: w. xu, j. wu
  Keywords: protein-inhibitor complex, acetylation, endoplasmic reticulum, hydrolase, membrane, oxidation, phosphoprotein, polymorphism, protein phosphatase
  
• 2zo9.pdb. hydrolase 07-may-08 2zo9 Fe
  Title: malonate-bound structure of the glycerophosphodiesterase from enterobacter aerogenes (gpdq) and characterization of the native fe2+ metal ion preference
  Author: c. j. jackson, p. d. carr, d. l. ollis
  Keywords: metalloenzyme, zinc, iron, phosphodiesterase, hydrolase
  
• 2zoa.pdb. hydrolase 07-may-08 2zoa Fe
  Title: malonate-bound structure of the glycerophosphodiesterase from enterobacter aerogenes (gpdq) collected at 1.280 angstrom
  Author: d. l. ollis, c. j. jackson, p. d. carr
  Keywords: metalloenzyme, zinc, iron, phosphodiesterase, hydrolase
  
• 3b54.pdb. transferase 25-oct-07 3b54
  Title: saccharomyces cerevisiae nucleoside diphosphate kinase
  Author: h. b. wang, r. bao, y. x. cheng
  Keywords: atp-binding, cytoplasm, kinase, magnesium, metal-binding, mitochondrion, nucleotide metabolism, nucleotide-binding, phosphorylation, transferase
  
• 3b7e.pdb. hydrolase 30-oct-07 3b7e Ca
  Title: neuraminidase of a/brevig mission/1/1918 h1n1 strain in complex with zanamivir
  Author: x. xu
  Keywords: glycosidase, hydrolase, membrane, transmembrane, virion
  
• 3b7r.pdb. hydrolase 31-oct-07 3b7r Zn Yb
  Title: leukotriene a4 hydrolase complexed with inhibitor rb3040
  Author: f. tholander, j. haeggstrom, m. thunnissen, a. muroya, b. -p. roques, m. -c. fournie-zaluski
  Keywords: analogue peptide, hydrolysis, alternative splicing, cytoplasm, hydrolase, leukotriene biosynthesis, metal-binding, metalloprotease, multifunctional enzyme, protease, zinc
  
• 3b7s.pdb. hydrolase 31-oct-07 3b7s Zn Yb
  Title: [e296q]lta4h in complex with rsr substrate
  Author: f. tholander, j. haeggstrom, m. thunnissen, a. muroya, b. -p. roques, m. -c. fournie-zaluski
  Keywords: analogue peptide, hydrolysis, alternative splicing, cytoplasm, hydrolase, leukotriene biosynthesis, metal-binding, metalloprotease, multifunctional enzyme, protease, zinc, tripeptide substrate
  
• 3b7t.pdb. hydrolase 31-oct-07 3b7t Zn Yb
  Title: [e296q]lta4h in complex with arg-ala-arg substrate
  Author: f. tholander, j. haeggstrom, m. thunnissen, a. muroya, b. -p. roques, m. -c. fournie-zaluski
  Keywords: analogue peptide, hydrolysis, alternative splicing, cytoplasm, hydrolase, leukotriene biosynthesis, metal-binding, metalloprotease, multifunctional enzyme, protease, zinc, tripeptide substrate
  
• 3b7u.pdb. hydrolase 31-oct-07 3b7u Zn Yb
  Title: leukotriene a4 hydrolase complexed with kelatorphan
  Author: f. tholander, j. haeggstrom, m. thunnissen, a. muroya, b. -p. roques, m. -c. fournie-zaluski
  Keywords: analogue peptide, hydrolysis, alternative splicing, cytoplasm, hydrolase, leukotriene biosynthesis, metal-binding, metalloprotease, multifunctional enzyme, protease, zinc
  
• 3bcq.pdb. transport protein/oxygen binding 13-nov-07 3bcq Fe
  Title: crystal structure of oxy-hemoglobin from brycon cephalus
  Author: c. d. poy, a. m. leopoldino, p. rahal, w. f. de azevedo, g. o. b. rodriguez, m. t. murakami
  Keywords: fish, brycon cephalus, heme, iron, metal- binding, oxygen transport, transport, transport protein/oxygen binding complex
  
• 3bet.pdb. lyase 20-nov-07 3bet Zn
  Title: crystal structure of the human carbonic anhydrase ii in complex with stx 641 at 1.85 angstroms resolution
  Author: a. di fiore, g. de simone
  Keywords: acetylation, cytoplasm, disease mutation, lyase, metal-binding, polymorphism, zinc
  
• 3bgv.pdb. transferase 27-nov-07 3bgv
  Title: the crystals structure of mrna cap guanine-n7 methyltransferase
  Author: v. v. lunin, h. wu, h. zeng, t. antoshenko, f. mackenzie, j. weigelt, c. h. arrowsmith, a. m. edwards, a. bochkarev, j. min, a. n. plotnikov, structural genomics consortium (sgc)
  Keywords: alternative splicing, mrna capping, mrna processing, nucleus, phosphoprotein, rna-binding, s- adenosyl-l-methionine, structural genomics, structural genomics consortium, sgc
  
• 3bki.pdb. transport protein 06-dec-07 3bki
  Title: crystal structure of the glur2 ligand binding core (s1s2j) in complex with fqx at 1.87 angstroms
  Author: l. cruz, e. estebanez-perpina, s. pfaff, s. borngraeber, n. bao, r. fletterick, p. england
  Keywords: postsynaptic cell membrane, rna editing, synapse, transmembrane, transport, transport protein
  
• 3bqm.pdb. cell adhesion 20-dec-07 3bqm F
  Title: lfa-1 i domain bound to inhibitors
  Author: l. f. silvian
  Keywords: leukocyte function associated antigen-1, alternative splicing, calcium, cell adhesion, glycoprotein, integrin, magnesium, membrane, polymorphism, receptor, transmembrane
  
• 3bqn.pdb. cell adhesion 20-dec-07 3bqn F
  Title: lfa-1 i domain bound to inhibitors
  Author: l. f. silvian
  Keywords: leukocyte function associated antigen-1, alternative splicing, calcium, cell adhesion, glycoprotein, magnesium, membrane, polymorphism, receptor, transmembrane
  
• 3bwh.pdb. translation 09-jan-08 3bwh
  Title: atomic resolution structure of cucurmosin, a novel type 1 rip from the sarcocarp of cucurbita moschata
  Author: l. chen
  Keywords: translation
  
• 3bws.pdb. unknown function 10-jan-08 3bws Se
  Title: crystal structure of the leptospiral antigen lp49
  Author: p. o. giuseppe, f. o. neves, a. l. t. o. nascimento, b. g. guimaraes
  Keywords: immunoglobulin-like, 7-bladed beta propeller, unknown function
  
• 3c1b.pdb. structural protein/dna 22-jan-08 3c1b
  Title: the effect of h3 k79 dimethylation and h4 k20 trimethylation on nucleosome and chromatin structure
  Author: x. lu, m. simon, j. chodaparambil, j. hansen, k. shokat, k. luger
  Keywords: nucleus, phosphoprotein, ubl conjugation, structural protein/dna complex
  
• 3c1c.pdb. structural protein/dna 22-jan-08 3c1c
  Title: the effect of h3 k79 dimethylation and h4 k20 trimethylation on nucleosome and chromatin structure
  Author: x. lu, m. simon, j. chodaparambil, j. hansen, k. shokat, k. luger
  Keywords: phosphoprotein, ubl conjugation, structural protein/dna complex
  
• 3c7u.pdb. hydrolase/hydrolase inhibitor 08-feb-08 3c7u
  Title: structural insight into the kinetics and cp of interactions between tem-1-lactamase and blip
  Author: j. wang, d. -c. chow
  Keywords: antibiotic resistance, hydrolase, plasmid, secreted, hydrolase/hydrolase inhibitor complex
  
• 3c7v.pdb. hydrolase/hydrolase inhibitor 08-feb-08 3c7v
  Title: structural insight into the kinetics and delta-cp of interactions between tem-1 beta-lactamase and blip
  Author: j. wang, d. -c. chow
  Keywords: antibiotic resistance, hydrolase, plasmid, secreted, hydrolase/hydrolase inhibitor complex
  
• 3c9w.pdb. transferase 18-feb-08 3c9w
  Title: crystal structure of erk-2 with hypothemycin covalently bound
  Author: r. j. rosenfeld
  Keywords: acetylation, atp-binding, cell cycle, kinase, nucleotide-binding, phosphoprotein, serine/threonine- protein kinase, transferase
  
• 3cbb.pdb. transcription/dna 21-feb-08 3cbb Zn
  Title: crystal structure of hepatocyte nuclear factor 4alpha in complex with dna: diabetes gene product
  Author: p. lu, g. rha, m. melikishvili, b. c. adkins, m. g. fried, y. -i. chi
  Keywords: protein-dna complex, diabetes, transcription/dna complex
  
• 3cjf.pdb. transferase 12-mar-08 3cjf
  Title: crystal structure of vegfr2 in complex with a 3,4,5- trimethoxy aniline containing pyrimidine
  Author: r. t. nolte
  Keywords: membrane, nucleotide- binding, phosphoprotein, polymorphism, transferase, transmembrane, tyrosine-protein kinase
  
• 3cjg.pdb. transferase 12-mar-08 3cjg
  Title: crystal structure of vegfr2 in complex with a 3,4,5- trimethoxy aniline containing pyrimidine
  Author: r. t. nolte
  Keywords: membrane, nucleotide- binding, phosphoprotein, polymorphism, transferase, transmembrane, tyrosine-protein kinase
  
• 3cjw.pdb. transcription 14-mar-08 3cjw
  Title: crystal structure of the human coup-tfii ligand binding domain
  Author: s. w. kruse, r. reynolds, c. vonrhein, h. e. xu
  Keywords: nuclear receptor, ligand binding domain, orphan receptor, three-layered helical sandwich, dna-binding, metal-binding, nucleus, receptor, transcription, transcription regulation, zinc, zinc-finger
  
• 3cmj.pdb. hydrolase 22-mar-08 3cmj Na
  Title: crystal structure of engineered beta-glucosidase from soil metagenome
  Author: k. y. hwang, k. h. nam
  Keywords: hydrolase
  
• 3cov.pdb. ligase 29-mar-08 3cov
  Title: crystal structure of mycobacterium tuberculosis pantothenate synthetase at 1.5 ang resolution- apo form
  Author: a. ciulli, d. y. chirgadze, t. l. blundell, c. abell
  Keywords: pantothenate biosynthesis, enzymes, ligase, drug design, atp-binding, cytoplasm, magnesium, metal-binding, nucleotide-binding
  
• 3cow.pdb. ligase 29-mar-08 3cow
  Title: crystal structure of mycobacterium tuberculosis pantothenate synthetase at 1.8 ang resolution- in complex with sulphonamide inhibitor 2
  Author: a. ciulli, d. y. chirgadze, t. l. blundell, c. abell
  Keywords: pantothenate biosynthesis, enzymes, ligase, inhibitors, drug design, atp-binding, cytoplasm, magnesium, metal-binding, nucleotide-binding
  
• 3coy.pdb. ligase 29-mar-08 3coy
  Title: crystal structure of mycobacterium tuberculosis pantothenate synthetase at 2.05 ang resolution- in complex with sulphonamide inhibitor 3
  Author: a. ciulli, d. y. chirgadze, t. l. blundell, c. abell
  Keywords: pantothenate biosynthesis, enzymes, ligase, inhibitors, drug design, atp-binding, cytoplasm, magnesium, metal-binding, nucleotide-binding
  
• 3coz.pdb. ligase 29-mar-08 3coz
  Title: crystal structure of mycobacterium tuberculosis pantothenate synthetase at 2.0 ang resolution- in complex with sulphonamide inhibitor 4
  Author: a. ciulli, d. y. chirgadze, t. l. blundell, c. abell
  Keywords: pantothenate biosynthesis, enzymes, ligase, inhibitors, drug design, atp-binding, cytoplasm, magnesium, metal-binding, nucleotide-binding
  
• 3crp.pdb. protein binding 07-apr-08 3crp Na
  Title: a heterospecific leucine zipper tetramer
  Author: j. liu
  Keywords: anti-parallel tetramer, protein complex, heterospecific interaction, activator, amino-acid biosynthesis, dna-binding, nucleus, phosphoprotein, transcription, transcription regulation, protein binding
  
• 3cvm.pdb. blood clotting 18-apr-08 3cvm He Hg
  Title: high resolution structure of a stable plasminogen activator inhibitor type-1 in its protease cleaved form
  Author: j. k. jensen, p. g. w. gettins
  Keywords: cleaved serpin, glycoprotein, plasminogen activation, polymorphism, protease inhibitor, secreted, serine protease inhibitor, blood clotting
  
• 3d0l.pdb. immune system 01-may-08 3d0l
  Title: crystal structure of the hiv-1 broadly neutralizing antibody 2f5 in complex with the gp41 fp-mper hyb3k construct 514gigalflgflgaags528kk-ahx- 655kneqelleldkwaslwn671
  Author: j. p. julien, s. bryson, b. g. de la torre, d. andreu, j. l. nieva, e. f. pai
  Keywords: antibody, neutralization, epitope, 2f5, gp41, immune system
  
• 3d0p.pdb. hydrolase/dna 02-may-08 3d0p Na
  Title: insights into rna/dna hybrid recognition and processing by rnase h from the crystal structure of a non-specific enzyme-dsdna complex
  Author: p. s. pallan, m. egli
  Keywords: a-form, b-form, metal ions, protein- dna complex, x-ray crystallography, cytoplasm, endonuclease, hydrolase, magnesium, manganese, metal-binding, nuclease, hydrolase/dna complex
  
• 3d3j.pdb. protein binding 12-may-08 3d3j
  Title: crystal structure of human edc3p
  Author: s. h. m. ling
  Keywords: cytoplasm, phosphoprotein, protein binding
  
• 3d3k.pdb. protein binding 12-may-08 3d3k
  Title: crystal structure of human edc3p
  Author: s. h. m. ling
  Keywords: cytoplasm, phosphoprotein, protein binding
  
• 3d4y.pdb. hydrolase 15-may-08 3d4y Zn
  Title: golgi mannosidase ii complex with mannoimidazole
  Author: d. a. kuntz, c. a. tarling, s. g. withers, d. r. rose
  Keywords: hydrolase
  
• 3d4z.pdb. hydrolase 15-may-08 3d4z Zn
  Title: golgi mannosidase ii complex with gluco-imidazole
  Author: d. a. kuntz, c. a. tarling, s. g. withers, d. r. rose
  Keywords: hydrolase
  
• 3d50.pdb. hydrolase 15-may-08 3d50 Zn
  Title: golgi mannosidase ii complex with n-octyl-6-epi-valienamine
  Author: d. a. kuntz, c. a. tarling, s. g. withers, d. r. rose
  Keywords: hydrolase
  
• 3d51.pdb. hydrolase 15-may-08 3d51 Zn
  Title: golgi mannosidase ii complex with gluco-hydroxyiminolactam
  Author: d. a. kuntz, c. a. tarling, s. g. withers, d. r. rose
  Keywords: hydrolase
  
• 3d52.pdb. hydrolase 15-may-08 3d52 Cl Zn
  Title: golgi mannosidase ii complex with an n-aryl carbamate derivative of gluco-hydroxyiminolactam
  Author: d. a. kuntz, c. a. tarling, s. g. withers, d. r. rose
  Keywords: golgi apparatus, hydrolase, membrane, metal-binding, signal-anchor, transmembrane, zinc
  
• 3d5a.pdb. ribosome 16-may-08 3d5a Mg Zn
  Title: structural basis for translation termination on the 70s ribosome. this file contains the 30s subunit, release factor 1 (rf1), two trna, and mrna molecules of one 70s ribosome. the entire crystal structure contains two 70s ribosomes as described in remark 400.
  Author: m. laurberg, h. asahara, a. korostelev, j. zhu, s. trakhanov, h. f. noller
  Keywords: coiled coil, ribonucleoprotein, ribosomal protein, rna-binding, rrna-binding, metal-binding, zinc, zinc-finger, trna-binding, cytoplasm, protein biosynthesis
  
• 3d5b.pdb. ribosome 16-may-08 3d5b Mg
  Title: structural basis for translation termination on the 70s ribosome. this file contains the 50s subunit of one 70s ribosome. the entire crystal structure contains two 70s ribosomes as described in remark 400.
  Author: m. laurberg, h. asahara, a. korostelev, j. zhu, s. trakhanov, h. f. noller
  Keywords: ribonucleoprotein, ribosomal protein, rna-binding, rrna-binding, trna-binding, metal-binding, zinc
  
• 3d5c.pdb. ribosome 16-may-08 3d5c Mg Zn
  Title: structural basis for translation termination on the 70s ribosome. this file contains the 30s subunit, release factor 1 (rf1), two trna, and mrna molecules of the second 70s ribosome. the entire crystal structure contains two 70s ribosomes as described in remark 400.
  Author: m. laurberg, h. asahara, a. korostelev, j. zhu, s. trakhanov, h. f. noller
  Keywords: coiled coil, ribonucleoprotein, ribosomal protein, rna-binding, rrna-binding, metal-binding, zinc, zinc-finger, trna-binding, cytoplasm, protein biosynthesis
  
• 3d5d.pdb. ribosome 16-may-08 3d5d Mg
  Title: structural basis for translation termination on the 70s ribosome. this file contains the 50s subunit of the second 70s ribosome. the entire crystal structure contains two 70s ribosomes as described in remark 400.
  Author: m. laurberg, h. asahara, a. korostelev, j. zhu, s. trakhanov, h. f. noller
  Keywords: ribonucleoprotein, ribosomal protein, rna-binding, rrna-binding, trna-binding, metal-binding, zinc
  
• 3d5q.pdb. oxidoreductase 16-may-08 3d5q F
  Title: crystal structure of 11b-hsd1 in complex with triazole inhibitor
  Author: z. wang, j. liu, a. sudom, n. p. c. walker
  Keywords: 11beta, hydroxysteroid, dehydrogenase, endoplasmic reticulum, glycoprotein, lipid metabolism, membrane, microsome, nadp, polymorphism, signal-anchor, steroid metabolism, transmembrane
  
• 3d6y.pdb. transcription regulator/dna 20-may-08 3d6y
  Title: crystal structure of r275e mutant of bmrr bound to dna and berberine
  Author: k. j. newberry, r. g. brennan
  Keywords: transcription regulation, protein-dna complex, activator, dna-binding, transcription regulator/dna complex
  
• 3d6z.pdb. transcription regulator/dna 20-may-08 3d6z
  Title: crystal structure of r275e mutant of bmrr bound to dna and rhodamine
  Author: k. j. newberry, r. g. brennan
  Keywords: transcription regulation, protein-dna complex, activator, dna-binding, transcription regulator/dna complex
  
• 3d70.pdb. transcription regulator/dna 20-may-08 3d70
  Title: crystal structure of e253a mutant of bmrr bound to 22-bp oligonucleotide
  Author: k. j. newberry, r. g. brennan
  Keywords: transcription regulation, protein-dna complex, activator, dna-binding, transcription regulator/dna complex
  
• 3d71.pdb. transcription regulator/dna 20-may-08 3d71 F Zn
  Title: crystal structure of e253q bmrr bound to 22 base pair promoter site
  Author: k. j. newberry, j. l. huffman, r. g. brennan
  Keywords: protein-dna complex, multidrug binding protein, merr family, winged-helix, activator, dna- binding, transcription regulation, transcription regulator/dna complex
  
• 3da3.pdb. antibiotic 28-may-08 3da3 Mg
  Title: crystal structure of colicin m, a novel phosphatase specifically imported by escherichia coli
  Author: k. zeth, r. albrecht, r. m. christin, v. braun
  Keywords: phosphatase, xray, dimer, three functional domains, antibiotic, antimicrobial, bacteriocin, plasmid, tonb box
  
• 3da4.pdb. antibiotic 28-may-08 3da4
  Title: crystal structure of colicin m, a novel phosphatase specifically imported by escherichia coli
  Author: k. zeth, r. albrecht, v. braun
  Keywords: phosphatase, crystal structure, antibiotic, antimicrobial, bacteriocin, plasmid, tonb box
  
• 3db8.pdb. transferase 30-may-08 3db8 Cl
  Title: crystal structure of an activated (thr->asp) polo-like kinase 1 (plk1) catalytic domain in complex with compound 041
  Author: r. a. elling, e. j. hanan, w. lew, m. j. romanowski
  Keywords: plk1, catalytic domain, small-molecule inhibitor, kinase, transferase
  
• 3dbc.pdb. transferase 31-may-08 3dbc
  Title: crystal structure of an activated (thr->asp) polo-like kinase 1 (plk1) catalytic domain in complex with compound 257
  Author: r. a. elling, j. zhu, k. j. barr, m. j. romanowski
  Keywords: plk1, catalytic domain, small-molecule inhibitor, kinase, transferase
  
• 3dbd.pdb. transferase 31-may-08 3dbd Cl
  Title: crystal structure of an activated (thr->asp) polo-like kinase 1 (plk1) catalytic domain in complex with compound 094
  Author: r. a. elling, k. j. barr, m. j. romanowski
  Keywords: plk1, catalytic domain, small-molecule inhibitor, kinase, transferase
  
• 3dbe.pdb. transferase 31-may-08 3dbe Cl
  Title: crystal structure of an activated (thr->asp) polo-like kinase 1 (plk1) catalytic domain in complex with compound 557
  Author: r. a. elling, k. j. barr, m. j. romanowski
  Keywords: plk1, catalytic domain, small-molecule inhibitor, kinase, transferase
  
• 3dbf.pdb. transferase 31-may-08 3dbf Cl
  Title: crystal structure of an activated (thr->asp) polo-like kinase 1 (plk1) catalytic domain in complex with compound 562
  Author: r. a. elling, j. zhu, k. j. barr, m. j. romanowski
  Keywords: plk1, catalytic domain, small-molecule inhibitor, kinase, transferase
  
• 3dbs.pdb. transferase 02-jun-08 3dbs
  Title: structure of pi3k gamma in complex with gdc0941
  Author: c. wiesmann, m. ultsch
  Keywords: inhibitor, kinase, transferase
  
• 3ddt.pdb. ligase 06-jun-08 3ddt Zn
  Title: crystal structure of the b2 box from murf1 in dimeric state
  Author: o. mayans, m. mrosek
  Keywords: ring-like fold, coiled coil, cytoplasm, ligase, metal-binding, muscle protein, nucleus, polymorphism, ubl conjugation pathway, zinc, zinc-finger
  
• 3ddv.pdb. transcription regulator 06-jun-08 3ddv Mg
  Title: the crystal structure of the transcriptional regulator (gntr family) from enterococcus faecalis v583
  Author: r. zhang, m. zhou, m. bargassa, z. otwinowski, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: structure genomics, psi2, mcsg, structural genomics, protein structure initiative, midwest center for structural genomics, transcription regulator
  
• 3din.pdb. membrane protein, protein transport 20-jun-08 3din Mg F Be
  Title: crystal structure of the protein-translocation complex formed by the secy channel and the seca atpase
  Author: j. zimmer, t. a. rapoport
  Keywords: membrane protein, atpase, atp- binding, cytoplasm, inner membrane, nucleotide-binding, protein transport, transport, transmembrane
  
• 3djl.pdb. oxidoreductase 23-jun-08 3djl Ca
  Title: crystal structure of alkylation response protein e. coli aidb
  Author: b. f. eichman, a. h. metz, t. bowles
  Keywords: beta-barrel, fad, flavoprotein, oxidoreductase
  
• 3dlk.pdb. transferase 27-jun-08 3dlk
  Title: crystal structure of an engineered form of the hiv-1 reverse transcriptase, rt69a
  Author: w. c. ho, j. d. bauman, d. m. himmel, k. das, e. arnold
  Keywords: hiv, reverse transcriptase, rt, crystal engineering, rna-binding, rna-directed dna polymerase, transferase, viral nucleoprotein
  
• 3dll.pdb. ribosome 27-jun-08 3dll Mg F Zn
  Title: the oxazolidinone antibiotics perturb the ribosomal peptidyl-transferase center and effect trna positioning
  Author: d. n. wilson, f. schluenzen, j. m. harms, a. l. starosta, s. r. connell, p. fucini
  Keywords: antibiotic, oxazolidinone, linezolid, ribonucleoprotein, ribosomal protein, rna-binding, rrna- binding, trna-binding, methylation, metal-binding, zinc, zinc-finger
  
• 3dm0.pdb. sugar binding protein,signaling protein 30-jun-08 3dm0
  Title: maltose binding protein fusion with rack1 from a. thaliana
  Author: h. ullah, e. l. scappini, a. f. moon, l. v. williams, d. l. armstrong, l. c. pedersen
  Keywords: signaling protein
  
• 3dmf.pdb. transferase 01-jul-08 3dmf
  Title: t. thermophilus 16s rrna n2 g1207 methyltransferase (rsmc) in complex with adomet
  Author: h. demirci, s. t. gregory, a. e. dahlberg, g. jogl
  Keywords: 16s rrna methyltransferase, g1207 methyltransferase, s-adenosyl-l-methionine, translation, transferase
  
• 3dmg.pdb. transferase 01-jul-08 3dmg
  Title: t. thermophilus 16s rrna n2 g1207 methyltransferase (rsmc) in complex with adohcy
  Author: h. demirci, s. t. gregory, a. e. dahlberg, g. jogl
  Keywords: 16s rrna methyltransferase, n2 g1207 methyltransferase, s-adenosyl-l-homocysteine, translation, methyltransferase, transferase
  
• 3dmh.pdb. transferase 01-jul-08 3dmh
  Title: t. thermophilus 16s rrna n2 g1207 methyltransferase (rsmc) in complex with adomet and guanosine
  Author: h. demirci, s. t. gregory, a. e. dahlberg, g. jogl
  Keywords: 16s rrna methyltransferase, n2 g1207 methyltransferase, s-adenosyl-l-homocysteine, translation, methyltransferase, transferase
  
• 3dmk.pdb. cell adhesion 01-jul-08 3dmk
  Title: crystal structure of down syndrome cell adhesion molecule (dscam) isoform 1.30.30, n-terminal eight ig domains
  Author: m. r. sawaya, w. m. wojtowicz, d. eisenberg, s. l. zipursky
  Keywords: immunoglobulin domain, cell adhesion
  
• 3dr2.pdb. hydrolase 10-jul-08 3dr2 Ca
  Title: structural and functional analyses of xc5397 from xanthomonas campestris: a gluconolactonase important in glucose secondary metabolic pathways
  Author: c. -n. chen, k. -h. chin, a. h. -j. wang, s. h. chou
  Keywords: gluconolactonase crystal structure, smp-30, six-bladed-propeller dimer, vitamin c, hydrolase
  
• 3drq.pdb. immune system 11-jul-08 3drq
  Title: crystal structure of the hiv-1 broadly neutralizing antibody 2f5 in complex with the gp41 fp-mper hyb3k construct 514gigalflgflgaags528kk-ahx- 655kneqelleldkwaslwn671 soaked in peg/2-propanol solution
  Author: j. p. julien, s. bryson, b. g. de la torre, d. andreu, j. l. nieva, e. f. pai
  Keywords: 2f5, gp41, nmab, immune system
  
• 3ds6.pdb. transferase 11-jul-08 3ds6
  Title: p38 complex with a phthalazine inhibitor
  Author: bradley herberich, rashid syed, vivian li, david grosfeld
  Keywords: alternative splicing, atp-binding, cytoplasm, kinase, nucleotide-binding, nucleus, phosphoprotein, polymorphism, serine/threonine-protein kinase, transferase
  
• 3dsh.pdb. dna binding protein 12-jul-08 3dsh
  Title: crystal structure of dimeric interferon regulatory factor 5 (irf-5) transactivation domain
  Author: w. chen, s. s. lam, h. srinath, z. jiang, j. j. correia, c. schiffer, k. a. fitzgerald, k. lin, w. e. royer jr.
  Keywords: dna-binding, nucleus, transcription, transcription regulation, dna binding protein
  
• 3dt2.pdb. lyase 14-jul-08 3dt2 Mn Na
  Title: the structure of rat cytosolic pepck in complex with oxalate and gtp
  Author: s. m. sullivan, t. holyoak
  Keywords: gluconeogenesis, lyase, cytoplasm, decarboxylase, gtp-binding, nucleotide-binding
  
• 3dt4.pdb. lyase 14-jul-08 3dt4 Mn Na
  Title: the structure of rat cytosolic pepck in complex with oxalate and gtp
  Author: s. m. sullivan, t. holyoak
  Keywords: gluconeogenesis, lyase, cytoplasm, decarboxylase, gtp-binding, nucleotide-binding
  
• 3dt7.pdb. lyase 14-jul-08 3dt7 Mn Na
  Title: the structure of rat cytosolic pepck in complex with beta- sulfopyruvate and gtp
  Author: s. m. sullivan, t. holyoak
  Keywords: gluconeogenesis, lyase, cytoplasm, decarboxylase, gtp-binding, nucleotide-binding
  
• 3dtb.pdb. lyase 14-jul-08 3dtb Mn Na
  Title: the structure of rat cytosolic pepck in complex with phosphoglycolate and gdp
  Author: s. m. sullivan, t. holyoak
  Keywords: gluconeogenesis, lyase, cytoplasm, decarboxylase, gtp-binding, nucleotide-binding
  
• 3dtm.pdb. hydrolase 15-jul-08 3dtm
  Title: increased folding stability of tem-1 beta-lactamase by in- vitro selection
  Author: i. kather, r. p. jakob, h. dobbek, f. x. schmid
  Keywords: hydrolase, antibiotic resistance, plasmid
  
• 3dtp.pdb. contractile protein 15-jul-08 3dtp He (cryo-electron microscopy)
  Title: tarantula heavy meromyosin obtained by flexible docking to tarantula muscle thick filament cryo-em 3d-map
  Author: l. alamo, w. wriggers, a. pinto, f. bartoli, l. salazar, f. zhao, r. craig, r. padron
  Keywords: smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain, regulatory light chain, motor protein, coiled-coil, contractile protein
  
• 3dtw.pdb. transferase 16-jul-08 3dtw Cl F
  Title: crystal structure of the vegfr2 kinase domain in complex with a benzisoxazole inhibitor
  Author: d. a. whittington, a. m. long, p. rose, y. gu, h. zhao
  Keywords: receptor tyrosine kinase, transferase
  
• 3duh.pdb. immune system/cytokine 17-jul-08 3duh
  Title: structure of interleukin-23
  Author: p. j. lupardus, k. c. garcia
  Keywords: immune system/cytokine complex
  
• 3dvu.pdb. viral protein/apoptosis 20-jul-08 3dvu
  Title: crystal structure of the complex of murine gamma- herpesvirus 68 bcl-2 homolog m11 and the beclin 1 bh3 domain
  Author: s. sinha
  Keywords: protein-protein complex, viral bcl-2, beclin 1, apoptosis, m11, antiviral defense, bh3 domain, coiled coil, cytoplasm, golgi apparatus, membrane, polymorphism, viral protein/apoptosis complex
  
• 3dw8.pdb. hydrolase 21-jul-08 3dw8 Mn
  Title: structure of a protein phosphatase 2a holoenzyme with b55 subunit
  Author: y. xu, y. chen, p. zhang, p. d. jeffrey, y. shi
  Keywords: holoenzyme, b55, pr55, acetylation, polymorphism, wd repeat, cytoplasm, hydrolase, iron, manganese, metal- binding, methylation, phosphoprotein, protein phosphatase
  
• 3dwl.pdb. structural protein 22-jul-08 3dwl
  Title: crystal structure of fission yeast arp2/3 complex lacking the arp2 subunit
  Author: b. j. nolen, t. d. pollard
  Keywords: actin-binding, atp-binding, cytoplasm, cytoskeleton, nucleotide-binding, wd repeat, structural protein
  
• 3dy5.pdb. lyase, oxidoreductase 25-jul-08 3dy5 Fe
  Title: allene oxide synthase 8r-lipoxygenase from plexaura homomalla
  Author: n. c. gilbert, m. niebuhr, h. tsuruta, m. e. newcomer
  Keywords: oxylipin biosynthesis
  
• 3dy6.pdb. transcription 25-jul-08 3dy6 I
  Title: ppardelta complexed with an anthranilic acid partial agonist
  Author: m. l. lambert, r. xu, b. g. shearer, t. m. wilson
  Keywords: nulear receptor, activator, alternative splicing, dna- binding, metal-binding, nucleus, transcription, transcription regulation, zinc, zinc-finger
  
• 3dyb.pdb. hydrolase 25-jul-08 3dyb He Hg Ca
  Title: proteinase k- digalacturonic acid complex
  Author: s. b. larson, j. s. day, a. mcpherson, r. cudney, c. nguyen, center for high-throughput structural biology (chtsb)
  Keywords: serine protease, zymogen
  
• 3e1u.pdb. hydrolase 04-aug-08 3e1u Zn
  Title: the crystal structure of the anti-viral apobec3g catalytic domain
  Author: l. holden, c. prochnow, y. p. chang, r. bransteitter, l. chelico, u. sen, r. c. stevens, r. f. goodman, x. s. chen
  Keywords: alternative splicing, antiviral defense, cytoplasm, host- virus interaction, hydrolase, metal-binding, nucleus, polymorphism, ubl conjugation, zinc
  
• 3e2m.pdb. cell adhesion 05-aug-08 3e2m F
  Title: lfa-1 i domain bound to inhibitors
  Author: l. f. silvian
  Keywords: leukocyte function associated antigen-1, alternative splicing, calcium, cell adhesion, glycoprotein, magnesium, membrane, polymorphism, receptor, transmembrane
  
• 3e38.pdb. structural genomics, unknown function 06-aug-08 3e38 Zn Se As
  Title: crystal structure of two-domain protein containing predicted php-like metal-dependent phosphoesterase (yp_001300751.1) from bacteroides vulgatus atcc 8482 at 2.20 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: unknown function
  
• 3e3h.pdb. hydrolase 07-aug-08 3e3h Co
  Title: crystal structure of the op hydrolase mutant from brevundimonas diminuta
  Author: p. li, t. e. reeves, j. k. grimsley, j. r. wild
  Keywords: membrane, metal-binding, plasmid, zinc
  
• 3e5c.pdb. ribonucleic acid 13-aug-08 3e5c Sr
  Title: crystal structure of the smk box (sam-iii) riboswitch with sam
  Author: c. lu
  Keywords: rna
  
• 3e5e.pdb. ribonucleic acid 13-aug-08 3e5e Sr
  Title: crystal structures of the smk box (sam-iii) riboswitch with sah
  Author: c. lu
  Keywords: rna
  
• 3e5f.pdb. ribonucleic acid 13-aug-08 3e5f Sr Se
  Title: crystal structures of the smk box (sam-iii) riboswitch with se-sam
  Author: c. lu
  Keywords: rna
  
• 3e65.pdb. oxidoreductase 14-aug-08 3e65 F Fe
  Title: murine inos dimer with heme, pterin and inhibitor ar-c120011
  Author: r. j. rosenfeld, e. d. garcin, e. d. getzoff
  Keywords: inducible nitric oxide synthase, calmodulin-binding, fad, fmn, heme, iron, metal-binding, nadp, oxidoreductase, polymorphism, zinc
  
• 3e67.pdb. oxidoreductase 14-aug-08 3e67 Fe
  Title: murine inos dimer with inhibitor 4-map bound
  Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stueh, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
  Keywords: oxygenase domain, dimer, isozyme- specific inhibitors, calmodulin-binding, fad, fmn, heme, iron, metal-binding, nadp, oxidoreductase, polymorphism, zinc
  
• 3e68.pdb. oxidoreductase 14-aug-08 3e68 Fe
  Title: structure of murine inos oxygenase domain with inhibitor ar- c130232
  Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stueh, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
  Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase, calmodulin-binding, fad, fmn, iron, metal- binding, nadp, polymorphism, zinc
  
• 3e6j.pdb. immune system 15-aug-08 3e6j
  Title: crystal structure of variable lymphocyte receptor (vlr) rbc36 in complex with h-trisaccharide
  Author: b. w. han, b. r. herrin, m. d. cooper, i. a. wilson
  Keywords: vlr, leucine-rich repeat, lrr, adaptive immunity, immune system, sea lamprey, jawless fish, receptor
  
• 3e6l.pdb. oxidoreductase 15-aug-08 3e6l Cl Fe
  Title: structure of murine inos oxygenase domain with inhibitor ar- c132283
  Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stueh, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
  Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase, calmodulin-binding, fad, fmn, iron, metal- binding, nadp, polymorphism, zinc
  
• 3e6n.pdb. oxidoreductase 15-aug-08 3e6n Fe
  Title: structure of murine inos oxygenase domain with inhibitor ar- c125813
  Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stueh, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
  Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase, calmodulin-binding, fad, fmn, iron, metal- binding, nadp, polymorphism, zinc
  
• 3e6o.pdb. oxidoreductase 15-aug-08 3e6o F Fe
  Title: structure of murine inos oxygenase domain with inhibitor ar- c124355
  Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stueh, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
  Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase, calmodulin-binding, fad, fmn, iron, metal- binding, nadp, polymorphism, zinc
  
• 3e6t.pdb. oxidoreductase 15-aug-08 3e6t F Fe
  Title: structure of murine inos oxygenase domain with inhibitor ar- c118901
  Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stueh, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
  Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase, calmodulin-binding, fad, fmn, iron, metal- binding, nadp, polymorphism, zinc
  
• 3e7g.pdb. oxidoreductase 18-aug-08 3e7g Zn Fe
  Title: structure of human inosox with inhibitor ar-c95791
  Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stueh, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
  Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase, alternative splicing, calcium, calmodulin- binding, fad, fmn, iron, metal-binding, nadp, phosphoprotein, polymorphism, zinc
  
• 3e7i.pdb. oxidoreductase 18-aug-08 3e7i F Zn Fe
  Title: structure of murine inos oxygenase domain with inhibitor ar- c94864
  Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stuehr, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
  Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase calmodulin-binding, fad, fmn, iron, metal- binding, nadp, oxidoreductase, polymorphism, zinc
  
• 3e7m.pdb. oxidoreductase 18-aug-08 3e7m Zn Fe
  Title: structure of murine inos oxygenase domain with inhibitor ar- c95791
  Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stuehr, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
  Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase calmodulin-binding, fad, fmn, iron, metal- binding, nadp, oxidoreductase, polymorphism, zinc
  
• 3e7s.pdb. oxidoreductase 18-aug-08 3e7s Zn Fe As
  Title: structure of bovine inos oxygenase domain with inhibitor ar- c95791
  Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stuehr, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
  Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase calmodulin-binding, fad, fmn, iron, metal- binding, nadp, oxidoreductase, polymorphism, zinc
  
• 3e7t.pdb. oxidoreductase 18-aug-08 3e7t F Fe
  Title: structure of murine inos oxygenase domain with inhibitor ar- c102222
  Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stuehr, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
  Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase calmodulin-binding, fad, fmn, iron, metal- binding, nadp, oxidoreductase, polymorphism, zinc
  
• 3e9l.pdb. rna binding protein, splicing 22-aug-08 3e9l Cl Na
  Title: crystal structure of human prp8, residues 1755-2016
  Author: v. pena, a. rozov, c. w. wahl
  Keywords: disease mutation, mrna processing, mrna splicing, nucleus, phosphoprotein, polymorphism, retinitis pigmentosa, rna-binding, sensory transduction, spliceosome, vision, rna binding protein, splicing
  
• 3e9o.pdb. rna binding protein, splicing 22-aug-08 3e9o Se
  Title: crystal structure of yeast prp8, residues 1836-2092
  Author: v. pena, a. rozov, c. w. wahl
  Keywords: mrna processing, mrna splicing, nucleus, phosphoprotein, rna-binding, spliceosome, rna binding protein, splicing
  
• 3e9p.pdb. rna binding protein, splicing 22-aug-08 3e9p
  Title: crystal structure of yeast prp8, residues 1827-2092
  Author: v. pena, a. rozov, c. w. wahl
  Keywords: mrna processing, mrna splicing, nucleus, phosphoprotein, rna-binding, spliceosome, rna binding protein, splicing
  
• 3e9s.pdb. hydrolase 23-aug-08 3e9s Cl Zn
  Title: a new class of papain-like protease/deubiquitinase inhibitors blocks sars virus replication
  Author: a. d. mesecar, k. ratia, s. pegan
  Keywords: virus, coronavirus, papain, papain-like, protease, plpro, nsp3, cytoplasm, hydrolase, membrane, metal-binding, ribosomal frameshifting, rna-binding, thiol protease, transmembrane, zinc, zinc-finger
  
• 3eah.pdb. oxidoreductase 25-aug-08 3eah Cl Zn Fe
  Title: structure of inhibited human enos oxygenase domain
  Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stuehr, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
  Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase calmodulin-binding, fad, fmn, iron, metal- binding, nadp, oxidoreductase, polymorphism, zinc
  
• 3eai.pdb. oxidoreductase 25-aug-08 3eai Fe
  Title: structure of inhibited murine inos oxygenase domain
  Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stuehr, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
  Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase calmodulin-binding, fad, fmn, iron, metal- binding, nadp, oxidoreductase, polymorphism, zinc
  
• 3eb8.pdb. hydrolase 27-aug-08 3eb8
  Title: vira
  Author: k. l. germane, b. w. spiller
  Keywords: alpha helix, hydrolase, plasmid, protease, secreted, thiol protease, virulence
  
• 3ebd.pdb. oxidoreductase 27-aug-08 3ebd Fe
  Title: structure of inhibited murine inos oxygenase domain
  Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stuehr, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
  Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase calmodulin-binding, fad, fmn, iron, metal- binding, nadp, oxidoreductase, polymorphism, zinc
  
• 3ebf.pdb. oxidoreductase 27-aug-08 3ebf Fe
  Title: structure of inhibited murine inos oxygenase domain
  Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stuehr, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
  Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase calmodulin-binding, fad, fmn, iron, metal- binding, nadp, oxidoreductase, polymorphism, zinc
  
• 3ecj.pdb. oxidoreductase 31-aug-08 3ecj Cl Fe Ca
  Title: structure of e323l mutant of homoprotocatechuate 2,3- dioxygenase from brevibacterium fuscum at 1.65a resolution
  Author: e. g. kovaleva, j. d. lipscomb
  Keywords: oxygenase, extradiol, feii, crystal packing, dioxygenase
  
• 3eck.pdb. oxidoreductase 31-aug-08 3eck Cl Fe Ca
  Title: structure of e323l homoprotocatechuate 2,3-dioxygenase from brevibacterium fuscum in complex with putative o-o bond cleavage intermediate formed via in crystallo reaction with 4-sulfonyl catechol at low oxygen concentrations
  Author: e. g. kovaleva, j. d. lipscomb
  Keywords: oxygenase, extradiol, feii, crystal packing, dioxygenase
  
• 3ecy.pdb. hydrolase 02-sep-08 3ecy
  Title: crystal structural analysis of drosophila melanogaster dutpase
  Author: e. takacs, o. barabas, b. g. vertessy
  Keywords: dimeric assembly, hydrolase
  
• 3edn.pdb. biosynthetic protein 03-sep-08 3edn Mg Se
  Title: crystal structure of the bacillus anthracis phenazine biosynthesis protein, phzf family
  Author: s. m. anderson, j. s. brunzelle, o. onopriyenko, a. savchenko, w. f. anderson, center for structural genomics of infectious diseases (csgid)
  Keywords: alpha and beta protein class, structural genomics, center for structural genomics of infectious diseases, csgid, biosynthetic protein
  
• 3efj.pdb. transferase 09-sep-08 3efj F
  Title: structure of c-met with pyrimidone inhibitor 7
  Author: n. d'angelo, s. bellon, d. whittington
  Keywords: transmembrane, tyrosine-protein kinase
  
• 3efk.pdb. transferase 09-sep-08 3efk F
  Title: structure of c-met with pyrimidone inhibitor 50
  Author: s. f. bellon, n. d'angelo, d. whittington, i. dussault
  Keywords: proto-oncogene, receptor, transferase, transmembrane, tyrosine-protein kinase
  
• 3efx.pdb. toxin 10-sep-08 3efx
  Title: novel binding site identified in a hybrid between cholera toxin and heat-labile enterotoxin, 1.9a crystal structure reveals the details
  Author: a. holmner, m. lebens, s. teneberg, j. angstrom, m. okvist, u. krengel
  Keywords: cholera toxin, heat-labile enterotoxin, blood group antigen
  
• 3egq.pdb. transcription regulator 11-sep-08 3egq Se
  Title: crystal structure of tetr-family transcriptional regulator (np_070644.1) from archaeoglobus fulgidus at 2.55 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: bacterial regulatory proteins, tetr family, transcription regulator
  
• 3ej8.pdb. oxidoreductase 17-sep-08 3ej8 Zn Fe
  Title: structure of double mutant of human inos oxygenase domain with bound immidazole
  Author: e. d. garcin, a. s. arvai, r. j. rosenfeld, m. d. kroeger, b. r. crane, g. andersson, g. andrews, p. j. hamley, p. r. mallinder, d. j. nicholls, s. a. st-gallay, a. c. tinker, n. p. gensmantel, a. mete, d. r. cheshire, s. connolly, d. j. stuehr, a. aberg, a. v. wallace, j. a. tainer, e. d. getzoff
  Keywords: nos, heme, tetrahydrobiopterin, oxidoreductase calmodulin-binding, fad, fmn, iron, metal- binding, nadp, oxidoreductase, polymorphism, zinc
  
• 3ejb.pdb. oxidoreductase/lipid transport 18-sep-08 3ejb Cl Fe
  Title: crystal structure of p450bioi in complex with tetradecanoic acid ligated acyl carrier protein
  Author: m. j. cryle, i. schlichting
  Keywords: oxidoreductase, oxidoreductase/lipid transport complex
  
• 3ejd.pdb. oxidoreductase/lipid transport 18-sep-08 3ejd Cl Fe
  Title: crystal structure of p450bioi in complex with hexadec-9z- enoic acid ligated acyl carrier protein
  Author: m. j. cryle, i. schlichting
  Keywords: oxidoreductase, oxidoreductase/lipid transport complex
  
• 3eje.pdb. oxidoreductase/lipid transport 18-sep-08 3eje Fe
  Title: crystal structure of p450bioi in complex with octadec-9z- enoic acid ligated acyl carrier protein
  Author: m. j. cryle, i. schlichting
  Keywords: oxidoreductase, oxidoreductase/lipid transport complex
  
• 3eku.pdb. contractile protein 19-sep-08 3eku Ca
  Title: crystal structure of monomeric actin bound to cytochalasin d
  Author: u. b. nair, p. b. joel, q. wan, s. lowey, m. a. rould, k. m. trybus
  Keywords: atp-state, fungal toxin, acetylation, atp- binding, cytoplasm, cytoskeleton, nucleotide-binding, contractile protein
  
• 3el2.pdb. contractile protein 19-sep-08 3el2 Ca
  Title: crystal structure of monomeric actin bound to ca-atp
  Author: u. b. nair, p. b. joel, q. wan, s. lowey, m. a. rould, k. m. trybus
  Keywords: atp-state, acetylation, atp-binding, cytoplasm, cytoskeleton, nucleotide-binding, contractile protein
  
• 3eme.pdb. structural genomics, unknown function 24-sep-08 3eme Se
  Title: crystal structure of rhodanese-like domain protein from staphylococcus aureus
  Author: y. kim, a. edwards, w. f. anderson, a. joachimiak, center for structural genomics of infectious diseases (csgid)
  Keywords: unknown function
  
• 3emh.pdb. gene regulation 24-sep-08 3emh
  Title: structural basis of wdr5-mll interaction
  Author: j. j. song, r. e. kingston
  Keywords: histone, wd40 repeat, x-ray crystallography, nucleus, phosphoprotein, wd repeat, zinc-finger, gene regulation
  
• 3emj.pdb. hydrolase 24-sep-08 3emj
  Title: 2.2 a crystal structure of inorganic pyrophosphatase from rickettsia prowazekii (p21 form)
  Author: seattle structural genomics center for infectious disease (ssgcid)
  Keywords: inorganic pyrophosphatase, seattle structural genomics center for infectious disease, ssgcid, cytoplasm, hydrolase, magnesium, metal-binding
  
• 3emy.pdb. hydrolase 25-sep-08 3emy Cd
  Title: crystal structure of trichoderma reesei aspartic proteinase complexed with pepstatin a
  Author: a. s. nascimento, s. krauchenco, a. m. golubev, a. gustchina, a. wlodawer, i. polikarpov
  Keywords: aspartic proteinase, aspartyl protease, hydrolase, protease
  
• 3en2.pdb. structural genomics, unknown function 25-sep-08 3en2 K Se
  Title: three-dimensional structure of the protein prib from ralstonia solanacearum at the resolution 2.3a. northeast structural genomics consortium target rsr213c.
  Author: a. p. kuzin, h. neely, h. wang, s. sahdev, e. l. foote, r. xiao, j. liu, j. k. everett, t. b. acton, b rost, g. t. montelione, j. f. hunt, l. tong, northeast structural genomics consortium (nesg)
  Keywords: structural genomics, psi-2, protein structure initiative, northeast structural genomics consortium, unknown function
  
• 3en8.pdb. structural genomics, unknown function 25-sep-08 3en8 Ca Se
  Title: crystal structure of ntf-2 like protein of unknown function (yp_553245.1) from burkholderia xenovorans lb400 at 1.85 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: ntf-2 like protein of unknown function, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, unknown function
  
• 3enb.pdb. rna binding protein 25-sep-08 3enb
  Title: crystal structure of prp8 core domain iv
  Author: m. j. schellenberg, d. b. ritchie, a. m. macmillan
  Keywords: rna binding protein
  
• 3eo2.pdb. splicing 26-sep-08 3eo2
  Title: crystal structure of the rhogef domain of human neuroepithelial cell-transforming gene 1 protein
  Author: l. nedyalkova, y. tong, w. tempel, f. mackenzie, c. h. arrowsmith, a. m. edwards, c. bountra, j. weigelt, a. bochkarev, h. park, structural genomics consortium (sgc)
  Keywords: guanine nucleotide exchange factor, structural genomics consortium, sgc, alternative splicing, cytoplasm, guanine-nucleotide releasing factor, nucleus, polymorphism, proto-oncogene
  
• 3eo3.pdb. isomerase, transferase 26-sep-08 3eo3 Zn
  Title: crystal structure of the n-acetylmannosamine kinase domain of human gne protein
  Author: l. nedyalkova, y. tong, w. m. rabeh, b. hong, w. tempel, f. mackenzie, c. h. arrowsmith, a. m. edwards, c. bountra, j. weigelt, a. bochkarev, h. park, structural genomics consortium (sgc)
  Keywords: phosphoprotein, transferase
  
• 3eo6.pdb. structural genomics, unknown function 26-sep-08 3eo6 Mg Se
  Title: crystal structure of protein of unknown function (duf1255) (afe_2634) from acidithiobacillus ferrooxidans ncib8455 at 0.97 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: protein of unknown function (duf1255), structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, unknown function
  
• 3eoi.pdb. structural genomics, unknown function 26-sep-08 3eoi
  Title: crystal structure of putative protein pilm from escherichia coli b7a
  Author: v. n. malashkevich, r. toro, j. b. bonanno, j. m. sauder, s. wasserman, s. k. burley, s. c. almo, new york sgx research center for structural genomics (nysgxrc)
  Keywords: crystal structure,protein structure initiative, new york structural genomix research consortium, nysgxrc, pilm, plasmid, psi-2, new york sgx research center for structural genomics, unknown function