Recent PDB releases or updates: week of 26 September 2008

• 1t70.pdb. hydrolase 07-may-04 1t70
  Title: crystal structure of a novel phosphatase from deinococcus radiodurans
  Author: d. h. shin, w. wang, r. kim, h. yokota, s. -h. kim, berkeley structural genomics center (bsgc)
  Keywords: protein structure initiative
  
• 1vk9.pdb. structural genomics, unknown function 06-may-04 1vk9 Zn Se
  Title: crystal structure of an adp-ribosylated protein with unknown function (tm1506) from thermotoga maritima at 2.70 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: hypothetical protein, structural genomics, jcsg, psi, protein structure initiative, joint center for structural genomics
  
• 1zcz.pdb. transferase/hydrolase 13-apr-05 1zcz K
  Title: crystal structure of phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolase (tm1249) from thermotoga maritima at 1.88 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: psi
  
• 2add.pdb. hydrolase 20-jul-05 2add
  Title: crystal structure of fructan 1-exohydrolase iia from cichorium intybus in complex with sucrose
  Author: m. verhaest, k. le roy, c. de ranter, a. van laere, w. van den ende, a. rabijns
  
  
• 2ade.pdb. hydrolase 20-jul-05 2ade
  Title: crystal structure of fructan 1-exohydrolase iia from cichorium intybus in complex with fructose
  Author: m. verhaest, k. le roy, c. de ranter, a. van laere, w. van den ende, a. rabijns
  
  
• 2aey.pdb. hydrolase 25-jul-05 2aey
  Title: crystal structure of fructan 1-exohydrolase iia from cichorium intybus in complex with 2,5 dideoxy-2,5-immino-d- mannitol
  Author: m. verhaest, k. le roy, c. de ranter, a. van laere, w. van den ende, a. rabijns
  
  
• 2aez.pdb. hydrolase 25-jul-05 2aez
  Title: crystal structure of fructan 1-exohydrolase iia (e201q) from cichorium intybus in complex with 1-kestose
  Author: m. verhaest, w. lammens, k. le roy, c. de ranter, a. van laere, w. van den ende, a. rabijns
  
  
• 2avh.pdb. deoxyribonucleic acid 30-aug-05 2avh K
  Title: g4t3g4 dimeric quadruplex structure
  Author: p. hazel, g. n. parkinson, s. neidle
  Keywords: loop
  
• 2avj.pdb. deoxyribonucleic acid 30-aug-05 2avj K Br As
  Title: g4(br)uttg4 dimeric quadruplex
  Author: p. hazel, g. n. parkinson, s. neidle
  Keywords: loop
  
• 2ets.pdb. structural genomics, unknown function 27-oct-05 2ets Cl Se
  Title: crystal structure of (np_646154.1) from staphylococcus aureus mw2 at 2.25 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: psi, protein structure initiative, joint center for structural genomics, jcsg
  
• 2f7d.pdb. hydrolase 30-nov-05 2f7d
  Title: a mutant rabbit cathepsin k with a nitrile inhibitor
  Author: j. r. somoza
  
  
• 2gu1.pdb. hydrolase 28-apr-06 2gu1 Zn Na
  Title: crystal structure of a zinc containing peptidase from vibrio cholerae
  Author: r. sugadev, d. kumaran, s. swaminathan, s. k. burley, new york structural genomix research consortium (nysgxrc)
  Keywords: alpha/beta, beta barrel, structural genomics, psi, protein structure initiative, new york structural genomix research consortium, nysgxrc
  
• 2gw0.pdb. deoxyribonucleic acid 03-may-06 2gw0 Na Ca
  Title: a d(tggggt)- sodium and calcium complex.
  Author: m. p. h. lee, g. n. parkinson, s. neidle
  Keywords: quadruplex, g-quadruplex, tetraplex, g-tetraplex, quadruple helix, parallel-stranded, d(tggggt), hydrated calcium ion, calcium, calcium ion, sodium, sodium ion.
  
• 2hoy.pdb. isomerase 17-jul-06 2hoy
  Title: inter-subunit signaling in gsam
  Author: j. stetefeld
  
  
• 2hoz.pdb. isomerase 17-jul-06 2hoz
  Title: inter-subunit signaling in gsam
  Author: j. stetefeld
  
  
• 2hp1.pdb. isomerase 17-jul-06 2hp1
  Title: inter-subunit signaling in gsam
  Author: j. stetefeld
  
  
• 2hp2.pdb. isomerase 17-jul-06 2hp2
  Title: inter-subunit signaling in gsam
  Author: j. stetefeld
  
  
• 2hs7.pdb. hydrolase 21-jul-06 2hs7 (powder diffraction)
  Title: multipattern rietveld refinement with protein powder data: an approach to higher resolution
  Author: r. b. von dreele
  Keywords: rietveld refinement, lysozyme
  
• 2hs9.pdb. hydrolase 21-jul-06 2hs9 (powder diffraction)
  Title: multipattern rietveld refinement with protein powder data: an approach to higher resolution
  Author: r. b. von dreele
  Keywords: rietveld refinement, lysozyme
  
• 2hso.pdb. hydrolase 22-jul-06 2hso (powder diffraction)
  Title: multipattern rietveld refinement with protein powder data: an approach to higher resolution
  Author: r. b. von dreele
  Keywords: rietveld refinement, lysozyme
  
• 2huj.pdb. structural genomics, unknown function 26-jul-06 2huj Se
  Title: crystal structure of a protein of uknown function (np_471338.1) from listeria innocua at 1.74 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: hypothetical protein, structural genomics, psi- 2, protein structure initiative, joint center for structural genomics, jcsg
  
• 2i04.pdb. peptide binding protein 09-aug-06 2i04
  Title: x-ray crystal structure of magi-1 pdz1 bound to the c- terminal peptide of hpv18 e6
  Author: x. s. chen, y. zhang, j. dasgupta, l. banks, m. thomas
  Keywords: e6 binding, tumor suppressor
  
• 2i0i.pdb. peptide binding protein 10-aug-06 2i0i
  Title: x-ray crystal structure of sap97 pdz3 bound to the c- terminal peptide of hpv18 e6
  Author: x. s. chen, y. zhang, j. dasgupta, l. banks, m. thomas
  Keywords: hpv18 e6, tumor suppressor, cervical carcinoma
  
• 2i0l.pdb. peptide binding protein 10-aug-06 2i0l
  Title: x-ray crystal structure of sap97 pdz2 bound to the c- terminal peptide of hpv18 e6.
  Author: x. s. chen, y. zhang, j. dasgupta, l. banks, m. thomas
  Keywords: hpv18 e6, tumor suppressor, carcinoma
  
• 2i5q.pdb. lyase 25-aug-06 2i5q
  Title: crystal structure of apo l-rhamnonate dehydratase from escherichia coli
  Author: a. a. fedorov, e. v. fedorov, j. m. sauder, s. k. burley, j. a. gerlt, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: clone name 9265b1bct1p1_10997_1, structural genomics, psi, protein structure initiative, new york structural genomix research consortium, nysgxrc
  
• 2i8e.pdb. structural genomics, unknown function 01-sep-06 2i8e I Se
  Title: structure of sso1404, a predicted dna repair-associated protein from sulfolobus solfataricus p2
  Author: s. wang, m. d. zimmerman, m. kudritska, m. chruszcz, a. savchenko, a. edwards, w. minor, midwest center for structural genomics (mcsg)
  Keywords: unknown function, structural genomics, midwest center for structural genomics, mcsg, psi, protein structure initiative
  
• 2jkf.pdb. protein-binding 28-aug-08 2jkf
  Title: plasmodium falciparum profilin
  Author: i. kursula, p. kursula, m. ganter, s. panjikar, k. matuschewski, h. schueler
  Keywords: plasmodium falciparum, malaria, profilin, cytoskeleton, actin filament structural protein, protein-binding
  
• 2jkg.pdb. protein-binding 28-aug-08 2jkg Mg
  Title: plasmodium falciparum profilin
  Author: i. kursula, p. kursula, m. ganter, s. panjikar, k. matuschewski, h. schueler
  Keywords: plasmodium falciparum, protein-binding, malaria, profilin, cytoskeleton, actin filament
  
• 2jl1.pdb. oxidoreductase 02-sep-08 2jl1
  Title: structural insight into bioremediation of triphenylmethane dyes by citrobacter sp. triphenylmethane reductase
  Author: y. kim, h. j. park, s. n. kwak, m. h. kim
  Keywords: oxidoreductase, bioremediation, triphenylmethane
  
• 2jmr.pdb. cell adhesion 29-nov-06 2jmr He Hg (NMR, 20 structures)
  Title: nmr structure of the e. coli type 1 pilus subunit fimf
  Author: a. d. gossert, p. bettendorff, c. puorger, m. vetsch, t. herrmann, f. fiorito, s. hiller, r. glockshuber, k. wuthrich
  Keywords: cell adhesion
  
• 2jo4.pdb. de novo protein 21-feb-07 2jo4 Hg (NMR, 10 structures)
  Title: tetrameric structure of kia7 peptide
  Author: j. lopez de la osa, c. gonzalez, d. v. laurents, a. chakrabartty, d. a. bateman
  Keywords: oligomer, prebiotic, de novo protein
  
• 2jo5.pdb. de novo protein 21-feb-07 2jo5 Hg (NMR, 10 structures)
  Title: tetrameric structure of kia7f peptide
  Author: j. lopez de la osa, c. gonzalez, d. v. laurents, a. chakrabartty, d. a. bateman
  Keywords: oligomer, prebiotic, de novo protein
  
• 2jpe.pdb. transcription 07-may-07 2jpe He Hg (NMR, 20 structures)
  Title: fha domain of nipp1
  Author: h. kumeta, k. ogura, y. fujioka, n. tanuma, k. kikuchi, f. inagaki
  Keywords: nipp1, mrna splicing
  
• 2jqe.pdb. signaling protein 31-may-07 2jqe Hg (NMR, 10 structures)
  Title: soution structure of af54 m-domain
  Author: u. ilangovan, a. p. hinck
  Keywords: srp54, nmr structure, solution, signaling protein
  
• 2jqs.pdb. neuropeptide 07-jun-07 2jqs (NMR, 30 structures)
  Title: conformation of dip-ast5 from 2d nmr data
  Author: e. meyerowitz, c. huang, s. mohanty
  Keywords: 3.10 helix among residues leu3-tyr4-ser5, neuropeptide
  
• 2jqu.pdb. neuropeptide 07-jun-07 2jqu (NMR, 30 structures)
  Title: conformation of dip-ast8 from 2d nmr data
  Author: e. meyerowitz, c. huang, s. mohanty
  Keywords: loose alpha turn among residues ser3-phe7, neuropeptide
  
• 2jrg.pdb. ribonucleic acid 26-jun-07 2jrg Ho (NMR, 11 structures)
  Title: nmr solution structure of the anticodon of e. coli trna- val3 with 2 modifications (cmo5u34 m6a37)
  Author: f. a. p. vendeix, a. dziergowska, e. m. gustilo, w. d. graham, b. sproat, a. malkiewicz, p. f. agris
  Keywords: valine, trna, anticodon stem loop, trna domain, rna hairpin, uridine 5-oxyacetic acid, cmo5u, n6- methyladenosine, m6a
  
• 2jv7.pdb. metal binding protein 12-sep-07 2jv7 He Hg (NMR, 20 structures)
  Title: nmr solution structure of histoplasma capsulatum cbp homodimer
  Author: m. r. beck, g. t. dekoster, d. p. cistola, w. e. goldman
  Keywords: calcium binding protein, homodimer, nmr, all alpha helical, glycoprotein, secreted, metal binding protein
  
• 2jws.pdb. de novo protein 24-oct-07 2jws He Hg (NMR, 20 structures)
  Title: solution nmr structures of two designed proteins with 88% sequence identity but different fold and function
  Author: y. he, y. chen, p. alexander, p. bryan, j. orban
  Keywords: folding, nmr, protein design, protein structure, de novo protein
  
• 2jwu.pdb. de novo protein 25-oct-07 2jwu He Hg (NMR, 20 structures)
  Title: solution nmr structures of two designed proteins with 88% sequence identity but different fold and function
  Author: y. he, y. chen, p. alexander, p. bryan, j. orban
  Keywords: folding, nmr, protein design, protein structure, de novo protein
  
• 2jxb.pdb. signaling protein complex 09-nov-07 2jxb He Hg (NMR, 20 structures)
  Title: structure of cd3epsilon-nck2 first sh3 domain complex
  Author: k. takeuchi, h. yang, e. ng, s. park, z. j. sun, e. l. reinherz, g. wagner
  Keywords: cd3epsilon, t-cell receptor, sh3 domain, immunology, cytoplasm, sh2 domain, signaling protein complex
  
• 2jz3.pdb. transcription inhibitor/transcription 27-dec-07 2jz3 He Hg (NMR, 20 structures)
  Title: socs box elonginbc ternary complex
  Author: j. j. babon, j. sabo, a. soetopo, s. yao, m. f. bailey, j. zhang, n. a. nicola, r. s. norton
  Keywords: signaling protein, transcription inhibitor/transcription complex
  
• 2k2n.pdb. transferase 04-apr-08 2k2n He Hg (NMR, 20 structures)
  Title: solution structure of a cyanobacterial phytochrome gaf domain in the red light-absorbing ground state
  Author: c. c. cornilescu, g. cornilescu, a. t. ulijasz, r. d. vierstra, j. l. markley
  Keywords: gaf domain, phycocyanobilin, pcb, bacteriophytochrome, cyanobacterial phytochrome, kinase, phosphoprotein, transferase
  
• 2k2w.pdb. cell cycle 14-apr-08 2k2w He Hg (NMR, 20 structures)
  Title: second brct domain of nbs1
  Author: c. xu, g. cui, m. botuyan, g. mer
  Keywords: dna repair, cell cycle checkpoint
  
• 2k4g.pdb. peptide nucleic acid 07-jun-08 2k4g (NMR, 11 structures)
  Title: solution structure of a peptide nucleic acid duplex, 10 structures
  Author: w. he, e. hatcher, a. balaeff, d. beratan, r. gil, m. madrid, c. achim
  Keywords: pna, pna-pna duplex, left-handed duplex, p-form
  
• 2k56.pdb. unknown function 26-jun-08 2k56 He Hg (NMR, 20 structures)
  Title: bank vole prion protein (121-231)
  Author: b. christen, s. hornemann, k. wuthrich
  Keywords: membrane, unknown function
  
• 2k6a.pdb. structural protein 07-jul-08 2k6a He Hg (NMR, 20 structures)
  Title: solution structure of eas d15 truncation mutant
  Author: a. h. kwan
  Keywords: eas, rodlets, assembly, amyloid, cell wall, cell wall biogenesis/degradation, secreted, structural protein
  
• 2k6o.pdb. antimicrobial protein 14-jul-08 2k6o He Hg (NMR, 4 structures)
  Title: human ll-37 structure
  Author: g. wang
  Keywords: antimicrobial protein
  
• 2o8r.pdb. transferase 12-dec-06 2o8r Se
  Title: crystal structure of polyphosphate kinase from porphyromonas gingivalis
  Author: y. patskovsky, r. toro, j. m. sauder, m. dickey, j. m. adams, s. ozyurt, s. r. wasserman, s. c. almo, s. k. burley, new york structural genomics research consortium (nysgrc), new york structural genomix research consortium (nysgxrc)
  Keywords: structural genomics, protein structure initiative, psi, nysgrc, new york structural genomics research consortium, structural genomics, new york structural genomix research consortium, nysgxrc
  
• 2ok9.pdb. toxin 16-jan-07 2ok9 Br
  Title: prtx-i-bpb
  Author: d. p. marchi-salvador, c. a. h. fernandes, a. m. soares, m. r. m. fontes
  Keywords: lys49-pla2, bothrops pirajai, piratoxin i
  
• 2okt.pdb. ligase 17-jan-07 2okt
  Title: crystal structure of o-succinylbenzoic acid synthetase from staphylococcus aureus, ligand-free form
  Author: y. patskovsky, r. toro, v. malashkevich, j. m. sauder, s. ozyurt, d. smith, m. dickey, m. maletic, a. powell, t. gheyi, s. r. wasserman, j. gerlt, s. c. almo, s. k. burley, new york structural genomix research consortium (nysgxrc)
  Keywords: nysgxrc
  
• 2oog.pdb. hydrolase 25-jan-07 2oog Zn
  Title: crystal structure of glycerophosphoryl diester phosphodiesterase from staphylococcus aureus
  Author: y. patskovsky, e. fedorov, r. toro, j. m. sauder, d. smith, j. freeman, m. maletic, a. powell, t. gheyi, s. r. wasserman, s. c. almo, s. k. burley, new york structural genomix research consortium (nysgxrc)
  Keywords: glycerophosphoryl diester phosphodiesterase, structural genomics, protein structure initiative, psi, new york structural genomix research consortium, nysgrc, nysgxrc, hydrolase
  
• 2pne.pdb. antifreeze protein 24-apr-07 2pne
  Title: crystal structure of the snow flea antifreeze protein
  Author: b. l. pentelute, kent s. b. h. , z. p. gates, v. tereshko, a. a. kossiakoff, j. kurutz, j. dashnau, j. m. vaderkooi
  Keywords: chemical protein synthesis, native chemical ligation
  
• 2qsd.pdb. structural genomics, unknown function 30-jul-07 2qsd Se
  Title: crystal structure of a protein il1583 from idiomarina loihiensis
  Author: y. patskovsky, j. bonanno, j. m. sauder, r. romero, m. rutter, j. koss, c. mckenzie, t. gheyi, k. bain, s. r. wasserman, s. k. burley, new york structural genomix research consortium (nysgxrc)
  Keywords: psi-2, protein structure initiative, nysgrc, new york structural genomics research consortium, new york structural genomix research consortium, nysgxrc, structural genomics, unknown function
  
• 2qug.pdb. protease inhibitor 05-aug-07 2qug
  Title: crystal structure of alpha-1-antitrypsin, crystal form a
  Author: g. hansen, c. j. morton, m. c. pearce, s. c. feil, j. j. adams, m. w. parker, s. p. bottomley
  Keywords: polymerisation, protein aggregation, protein unfolding, serpin, acute phase, disease mutation, glycoprotein, polymorphism, protease inhibitor, secreted, serine protease inhibitor
  
• 2qz5.pdb. signaling protein, lipid binding protein16-aug-07 2qz5
  Title: crystal structure of the c-terminal domain of aida
  Author: l. s. zheng
  Keywords: aida, signaling protein, lipid binding protein, alternative splicing, coiled coil, developmental protein
  
• 2qzq.pdb. signaling protein, lipid binding protein17-aug-07 2qzq Se
  Title: crystal structure of c-terminal of aida
  Author: l. s. zheng, j. w. wu
  Keywords: coiled coil, signaling protein, lipid binding protein
  
• 2r6m.pdb. metal binding protein 06-sep-07 2r6m Zn
  Title: crystal structure of rat ck2-beta subunit
  Author: y. shen
  Keywords: regulatory subunit, phosphorylation, wnt signaling pathway, metal binding protein
  
• 2r7i.pdb. transferase 08-sep-07 2r7i
  Title: crystal structure of catalytic subunit of protein kinase ck2
  Author: y. shen
  Keywords: kinase, atp-binding, nucleotide-binding, serine/threonine-protein kinase, transferase, wnt signaling pathway
  
• 2r88.pdb. transport protein 10-sep-07 2r88
  Title: crystal structure of the long-chain fatty acid transporter fadl mutant delta s3 kink
  Author: e. m. hearn, d. r. patel, b. w. lepore, m. indic, b. van den berg
  Keywords: outer membrane protein, lipid transport, phage recognition, transmembrane, transport, transport protein
  
• 2r89.pdb. transport protein 10-sep-07 2r89
  Title: crystal structure of the long-chain fatty acid transporter fadl mutant delta n3
  Author: e. m. hearn, d. r. patel, b. w. lepore, m. indic, b. van den berg
  Keywords: outer membrane protein, lipid transport, phage recognition, transmembrane, transport, transport protein
  
• 2r8a.pdb. transport protein 10-sep-07 2r8a
  Title: crystal structure of the long-chain fatty acid transporter fadl mutant delta n8
  Author: e. m. hearn, d. r. patel, b. w. lepore, m. indic, b. van den berg
  Keywords: outer membrane protein, lipid transport, phage recognition, transmembrane, transport, transport protein
  
• 2r8e.pdb. hydrolase 10-sep-07 2r8e Cl Mg
  Title: crystal structure of yrbi from escherichia coli in complex with mg
  Author: o. v. tsodikov, p. aggarwal, j. r. rubin, j. a. stuckey, r. woodard, t. biswas
  Keywords: yrbi, divalent metal, had superfamily, kdo 8-p, hydrolase, lipopolysaccharide biosynthesis, magnesium
  
• 2r8u.pdb. cell cycle 11-sep-07 2r8u Mo
  Title: structure of fragment of human end-binding protein 1 (eb1) containing the n-terminal domain at 1.35 a resolution
  Author: x. huang, l. l. lovelace, d. smith, l. lebioda
  Keywords: acetylation, cell cycle, cell division, cytoplasm, microtubule, mitosis, phosphorylation
  
• 2r8x.pdb. hydrolase 11-sep-07 2r8x Cl
  Title: crystal structure of yrbi phosphatase from escherichia coli
  Author: o. v. tsodikov, p. aggarwal, j. r. rubin, j. a. stuckey, r. w. woodard, t. biswas
  Keywords: phosphatase kdo8-p, hydrolase
  
• 2r8y.pdb. hydrolase 11-sep-07 2r8y Cl Ca
  Title: crystal structure of yrbi phosphatase from escherichia coli in a complex with ca
  Author: o. v. tsodikov, p. aggarwal, j. r. rubin, j. a. stuckey, r. w. woodard, t. biswas
  Keywords: phosphatase, divalent metal, ca, had superfamily, kdo8-p, hydrolase
  
• 2r8z.pdb. hydrolase 11-sep-07 2r8z Ca
  Title: crystal structure of yrbi phosphatase from escherichia coli in complex with a phosphate and a calcium ion
  Author: o. v. tsodikov, p. aggarwal, j. r. rubin, j. a. stuckey, r. w. woodard, t. biswas
  Keywords: phosphatase, divalent metal, phosphate, kdo8-p, had superfamily, hydrolase, lipopolysaccharide biosynthesis, magnesium
  
• 2r96.pdb. oxidoreductase, electron transport 12-sep-07 2r96
  Title: crystal structure of e. coli wrba in complex with fmn
  Author: i. kuta smatanova, j. wolfova, j. brynda, j. r. mesters, r. grandori, j. carey
  Keywords: quinone oxidoreductase, flavoprotein, flavodoxin-like fold, fmn-binding, oxidoreductase
  
• 2r97.pdb. oxidoreductase, electron transport 12-sep-07 2r97
  Title: crystal structure of e. coli wrba in complex with fmn
  Author: i. kuta smatanova, j. wolfova, j. brynda, j. r. mesters, r. grandori, j. carey
  Keywords: quinone oxidoreductase, flavoprotein, flavodoxin-like fold, fmn-binding, oxidoreductase
  
• 2r9c.pdb. hydrolase 12-sep-07 2r9c Cl Ca
  Title: calpain 1 proteolytic core inactivated by zlak-3001, an alpha-ketoamide
  Author: j. qian, r. l. campbell, p. l. davies
  Keywords: peptidase, inhibitor, alpha-ketoamide, calcium, cytoplasm, hydrolase, membrane, thiol protease
  
• 2r9f.pdb. hydrolase 12-sep-07 2r9f Cl Ca
  Title: calpain 1 proteolytic core inactivated by zlak-3002, an alpha-ketoamide
  Author: j. qian, r. l. campbell, p. l. davies
  Keywords: peptidase, inhibitor, alpha-ketoamide, calcium, cytoplasm, hydrolase, membrane, thiol protease
  
• 2rcw.pdb. transferase 20-sep-07 2rcw
  Title: parp complexed with a620223
  Author: c. h. park
  Keywords: adp-ribosylation, dna damage, dna repair, dna-binding, glycosyltransferase, metal-binding, nad, nucleus, phosphorylation, polymorphism, transferase, zinc, zinc-finger
  
• 2rd6.pdb. transferase 21-sep-07 2rd6
  Title: parp complexed with a861695
  Author: c. h. park
  Keywords: adp-ribosylation, dna damage, dna repair, dna-binding, glycosyltransferase, metal-binding, nad, nucleus, phosphorylation, polymorphism, transferase, zinc, zinc-finger
  
• 2rhk.pdb. viral protein/nuclear protein 09-oct-07 2rhk Zn
  Title: crystal structure of influenza a ns1a protein in complex with f2f3 fragment of human cellular factor cpsf30
  Author: k. das, l. -c. ma, r. xiao, b. radvansky, j. aramini, l. zhao, e. arnold, r. m. krug, g. t. montelione
  Keywords: suppressor of rna silencing, metal- binding, mrna processing, zinc, zinc-finger, metal binding protein, viral protein/metal binding protein complex, viral protein/nuclear protein complex
  
• 2rjv.pdb. structural protein 15-oct-07 2rjv
  Title: crystal structure of the h41y mutant of villin headpiece, p 21 21 21 space group
  Author: j. meng, c. j. mcknight
  Keywords: actin capping, actin-binding, calcium, cytoplasm, cytoskeleton, structural protein
  
• 2rjy.pdb. structural protein 16-oct-07 2rjy
  Title: crystal structure of villin headpiece, p21 21 21 space group
  Author: j. meng, c. j. mcknight
  Keywords: actin capping, actin-binding, calcium, cytoplasm, cytoskeleton, structural protein
  
• 2rn1.pdb. ribonucleic acid 05-dec-07 2rn1 Ho (NMR, 17 structures)
  Title: liquid crystal solution structure of the kissing complex formed by the apical loop of the hiv tar rna and a high affinity rna aptamer optimized by selex
  Author: h. van melckebeke, m. devany, c. di primo, f. beaurain, j. toulme, d. l. bryce, j. boisbouvier
  Keywords: hiv tar, high affinity rna aptamer selected by selex, liquid crystal nmr, ga base pair
  
• 2va4.pdb. cell adhesion 30-aug-07 2va4
  Title: crystal structure of ncam2 ig34
  Author: n. kulahin, k. k. rasmussen, o. kristensen, v. berezin, e. bock, p. walmod, m. gajhede
  Keywords: phosphorylation, immunoglobulin domain, membrane, adhesion, glycoprotein, cell adhesion
  
• 2vaj.pdb. cell adhesion 31-aug-07 2vaj
  Title: crystal structure of ncam2 ig1 (i4122 cell unit)
  Author: n. kulahin, k. k. rasmussen, o. kristensen, j. s. kastrup, j. -c. navarro-poulsen, v. berezin, e. bock, p. walmod, m. gajhede
  Keywords: cell adhesion
  
• 2vat.pdb. transferase 04-sep-07 2vat
  Title: crystal structure of deacetylcephalosporin c acetyltransferase in complex with coenzyme a
  Author: s. lejon, j. ellis, k. valegard
  Keywords: a/b- hydrolase fold, transferase, acyltransferase, acetyl coenzyme a, antibiotic biosynthesis, cephalosporin biosynthesis
  
• 2vav.pdb. transferase 04-sep-07 2vav
  Title: crystal structure of deacetylcephalosporin c acetyltransferase (dac-soak)
  Author: s. lejon, j. ellis, k. valegard
  Keywords: a/b- hydrolase fold, transferase, acyltransferase, acetyl coenzyme a, antibiotic biosynthesis, cephalosporin biosynthesis
  
• 2vax.pdb. transferase 04-sep-07 2vax
  Title: crystal structure of deacetylcephalosporin c acetyltransferase (cephalosporin c-soak)
  Author: s. lejon, j. ellis, k. valegard
  Keywords: cephalosporin biosynthesis, a/b- hydrolase fold, antibiotic biosynthesis, transferase, acyltransferase, acetyl transferase
  
• 2vbd.pdb. oxidoreductase 10-sep-07 2vbd Fe
  Title: isopenicillin n synthase with substrate analogue l,l,l- acomp (unexposed)
  Author: w. ge, i. j. clifton, r. m. adlington, j. e. baldwin, p. j. rutledge
  Keywords: penicillin biosynthesis, iron, oxygenase, vitamin c, metal-binding, monocyclic intermediate, oxidoreductase, b-lactam antibiotic
  
• 2vdt.pdb. transferase 11-oct-07 2vdt Ca
  Title: crystallographic structure of levansucrase from bacillus subtilis mutant s164a
  Author: m. e. ortiz-soto, m. rivera, e. rudino-pinera, c. olvera, a. lopez-munguia
  Keywords: glycosyltransferase, glycoside hydrolase, levan, secreted, transferase, levansucrase
  
• 2vf9.pdb. virus 01-nov-07 2vf9 Ca
  Title: crystal structure of bacteriophage prr1
  Author: m. persson, k. tars, l. liljas
  Keywords: rna-binding, capsid protein, structural protein, virus
  
• 2vh3.pdb. unknown function 17-nov-07 2vh3 Zn
  Title: ranasmurfin
  Author: m. oke, r. y. ching, l. g. carter, k. a. johnson, h. liu, s. a. mcmahon, c. bloch jr, c. h. botting, m. a. walsh, a. a. latiff, m. w. kennedy, a. cooper, j. h. naismith
  Keywords: bisltq, unknown function
  
• 2vp8.pdb. transferase 27-feb-08 2vp8
  Title: structure of mycobacterium tuberculosis rv1207
  Author: m. gengenbacher, t. xu, p. niyomwattanakit, g. spraggon, t. dick
  Keywords: mycobacterium tuberculosis, rv1207, transferase, folate biosynthesis, antibiotic resistance
  
• 2vpl.pdb. translation 01-mar-08 2vpl K
  Title: the structure of the complex between the first domain of l1 protein from thermus thermophilus and mrna from methanococcus jannaschii
  Author: v. kljashtorny, s. tishchenko, n. nevskaya, s. nikonov, m. garber
  Keywords: rna/protein complex, translation regulation, translation, repressor, rna-binding, trna-binding, rrna-binding
  
• 2vrb.pdb. oxidoreductase 31-mar-08 2vrb
  Title: crystal structure of the citrobacter sp. triphenylmethane reductase complexed with nadp(h)
  Author: y. kim, h. j. park, s. n. kwak, j. s. lee, t. k. oh, m. h. kim
  Keywords: sdr family, oxidoreductase, triphenylmethane reduction
  
• 2vrc.pdb. oxidoreductase 31-mar-08 2vrc Se
  Title: crystal structure of the citrobacter sp. triphenylmethane reductase complexed with nadp(h)
  Author: y. kim, h. j. park, s. n. kwak, j. s. lee, t. k. oh, m. h. kim
  Keywords: sdr family, oxidoreductase, triphenylmethane reduction
  
• 2vt0.pdb. hydrolase 03-may-08 2vt0
  Title: x-ray structure of a conjugate with conduritol-beta-epoxide of acid-beta-glucosidase overexpressed in cultured plant cells
  Author: b. brumshtein, h. m. greenblatt, y. shaaltiel, d. aviezer, i. silman, a. h. futerman, j. l. sussman
  Keywords: polymorphism, glycoprotein, ispc, membrane, cerezyme, lysosome, structural genomics, alternative splicing
  
• 2vtv.pdb. hydrolase 16-may-08 2vtv
  Title: phaz7 depolymerase from paucimonas lemoignei
  Author: a. c. papageorgiou, s. hermawan, c. b. singh, d. jendrossek
  Keywords: polymerase
  
• 2vuo.pdb. immune system 27-may-08 2vuo
  Title: crystal structure of the rabbit igg fc fragment
  Author: e. girardi, m. d. holdom, a. m. davies, b. j. sutton, a. j. beavil
  Keywords: immunoglobulin c region, igg, rabbit, fc fragment, glycosylation, immunoglobulins, immunoglobulin domain
  
• 2vxl.pdb. transferase 07-jul-08 2vxl Mn
  Title: screening a limited structure-based library identifies udp- galnac-specific mutants of alpha-1,3 galactosyltransferase
  Author: p. tumbale, h. jamaluddin, n. thiyagarajan, k. r. acharya, k. brew
  Keywords: galactosyltransferase, transmembrane, golgi apparatus, enzyme mechanism, glycoprotein, metal-binding, signal-anchor, alpha-1, membrane, manganese, transferase, transferase substrate specificity
  
• 2vxm.pdb. transferase 07-jul-08 2vxm
  Title: screening a limited structure-based library identifies udp- galnac-specific mutants of alpha-1,3 galactosyltransferase
  Author: p. tumbale, h. jamaluddin, n. thiyagarajan, k. r. acharya, k. brew
  Keywords: glycosyltransferase galactosyltransferase, transferase substrate specificity
  
• 2vy1.pdb. transcription 16-jul-08 2vy1
  Title: structure of leafy transcription factor from arabidopsis thaliana in complex with dna from ap1 promoter
  Author: c. hames, d. ptchelkine, c. grimm, e. thevenon, e. moyroud, f. gerard, j. l. martiel, r. benlloch, f. parcy, c. w. muller
  Keywords: polymorphism, transcription, developmental protein, transcription regulation, homeotic genes, differentiation, flower development, leafy, nucleus, activator, flowering, coiled coil
  
• 2vy2.pdb. transcription 16-jul-08 2vy2
  Title: structure of leafy transcription factor from arabidopsis thaliana in complex with dna from ag-i promoter
  Author: c. hames, d. ptchelkine, c. grimm, e. thevenon, e. moyroud, f. gerard, j. l. martiel, r. benlloch, f. parcy, c. w. muller
  Keywords: crystal structure
  
• 2vyi.pdb. chaperone 24-jul-08 2vyi
  Title: crystal structure of the tpr domain of human sgt
  Author: s. dutta, y. j. tan
  Keywords: chaperone, tpr repeat, phosphoprotein, tetratricopeptide repeat protein, host-virus interaction
  
• 2vyt.pdb. transcription 28-jul-08 2vyt
  Title: the mbt repeats of human scml2 bind to peptides containing mono methylated lysine.
  Author: c. m. santiveri, b. lechtenberg, m. d. allen, a. sathyamurthy, a. m. jaulent, s. m. v. freund, m. bycroft
  Keywords: mbt repeats, transcription, phosphoprotein, alternative splicing, transcription regulation, nucleus, repressor, chromatin, human scml2
  
• 2w06.pdb. transferase 08-aug-08 2w06
  Title: structure of cdk2 in complex with an imidazolyl pyrimidine, compound 5c
  Author: m. anderson, d. m. andrews, a. j. barker, c. a. brassington, k. f. byth, j. d. culshaw, m. r. v. finlay, e. fisher, h. h. j. mcmiken, c. p. green, d. w. heaton, i. a. nash, n. j. newcombe, s. e. oakes, a. roberts, j. j. stanway, a. p. thomas, j. a. tucker, h. m. weir
  Keywords: mitosis, cell cycle, transferase, serine/threonine-protein kinase, atp-binding, polymorphism, cell division, phosphoprotein, phosphorylation, nucleotide-binding
  
• 2w0c.pdb. virus 13-aug-08 2w0c Ca
  Title: x-ray structure of the entire lipid-containing bacteriophage pm2
  Author: n. g. a. abrescia, j. m. grimes, h. m. kivela, r. assenberg, g. c. sutton, s. j. butcher, j. k. h. bamford, d. h. bamford, d. i. stuart
  Keywords: member of prd1-adeno viral lineage, membrane-containing bacteriophage, virus virion, membrane, transmembrane, capsid protein
  
• 2yxj.pdb. apoptosis 26-apr-07 2yxj Cl
  Title: crystal structure of bcl-xl in complex with abt-737
  Author: p. e. czabotar, e. f. lee, b. j. smith, k. deshayes, k. zobel, w. d. fairlie, p. m. colman
  Keywords: cancer therapeutic
  
• 2z8t.pdb. hydrolase 10-sep-07 2z8t
  Title: crystal structure of protein-glutaminase of c.proteolyticum strain 9670
  Author: r. hashizume, b. mikami, s. yamaguchi
  Keywords: glutaminase, hydrolase
  
• 2z97.pdb. oxidoreductase 18-sep-07 2z97 K Fe
  Title: crystal structure of ferric cytochrome p450cam reconstituted with 7-methyl-7-depropionated hemin
  Author: t. hayashi, k. harada, k. sakurai, s. hirota, h. shimada
  Keywords: monooxygenase, camphor-hydroxylase, heme, iron, membrane, metal-binding, oxidoreductase
  
• 2z9e.pdb. biosynthetic protein 19-sep-07 2z9e Se
  Title: crystal structure of n-his tagged axcesd protein from acetobacter xylinum
  Author: s. q. hu, y. g. gao, m. yao, k. tajima, y. zhou, i. tanaka
  Keywords: octamer, tetramer of dimers, molecule ring, cellulose biosynthesis, biosynthetic protein, structural genomics, nppsfa, national project on protein structural and functional analyses
  
• 2z9f.pdb. biosynthetic protein 19-sep-07 2z9f
  Title: crystal structure of axcesd protein from acetobacter xylinum
  Author: s. q. hu, y. g. gao, m. yao, k. tajima, y. zhou, i. tanaka
  Keywords: octamer, tetramer of dimers, molecule ring, cellulose biosynthesis, structural genomics, nppsfa, national project on protein structural and functional analyses, biosynthetic protein
  
• 2zc7.pdb. hydrolase 02-nov-07 2zc7
  Title: crystal structure of class c beta-lactamase act-1
  Author: a. shimizu-ibuka, h. sakai, m. galleni
  Keywords: hydrolase
  
• 2zdt.pdb. transferase 27-nov-07 2zdt Cl
  Title: crystal structure of human jnk3 complexed with an isoquinolone inhibitor
  Author: s. sogabe, y. asano, s. fukumoto, n. habuka, a. fujishima
  Keywords: alternative splicing, atp-binding, chromosomal rearrangement, cytoplasm, epilepsy, nucleotide- binding, phosphoprotein, serine/threonine-protein kinase, transferase
  
• 2zdu.pdb. transferase 27-nov-07 2zdu Br
  Title: crystal structure of human jnk3 complexed with an isoquinolone inhibitor
  Author: s. sogabe, t. ohra, f. itoh, n. habuka, a. fujishima
  Keywords: alternative splicing, atp-binding, chromosomal rearrangement, cytoplasm, epilepsy, nucleotide- binding, phosphoprotein, serine/threonine-protein kinase, transferase
  
• 2zfi.pdb. transport protein 07-jan-08 2zfi Mg
  Title: crystal structure of the kif1a motor domain before mg release
  Author: r. nitta, y. okada, n. hirokawa
  Keywords: alpha and beta protein, enzyme, atpase, p-loop, motor protein, atp-binding, coiled coil, microtubule, nucleotide-binding, transport protein
  
• 2zfj.pdb. transport protein 08-jan-08 2zfj Mg
  Title: crystal structure of the kif1a motor domain during mg release: mg-releasing transition-1
  Author: r. nitta, y. okada, n. hirokawa
  Keywords: alpha and beta protein, enzyme, atpase, p-loop, motor protein, atp-binding, coiled coil, microtubule, nucleotide-binding, transport protein
  
• 2zfk.pdb. transport protein 08-jan-08 2zfk Mg
  Title: crystal structure of the kif1a motor domain during mg release: mg-releasing transition-2
  Author: r. nitta, y. okada, n. hirokawa
  Keywords: alpha and beta protein, enzyme, atpase, p-loop, motor protein, atp-binding, coiled coil, microtubule, nucleotide-binding, transport protein
  
• 2zfl.pdb. transport protein 08-jan-08 2zfl
  Title: crystal structure of the kif1a motor domain during mg release: mg-releasing transition-3
  Author: r. nitta, y. okada, n. hirokawa
  Keywords: alpha and beta protein, enzyme, atpase, p-loop, motor protein, atp-binding, coiled coil, microtubule, nucleotide-binding, transport protein
  
• 2zfm.pdb. transport protein 08-jan-08 2zfm
  Title: crystal structure of the kif1a motor domain after mg release
  Author: r. nitta, y. okada, n. hirokawa
  Keywords: alpha and beta protein, enzyme, atpase, p-loop, motor protein, atp-binding, coiled coil, microtubule, nucleotide-binding, transport protein
  
• 2zfn.pdb. transferase 08-jan-08 2zfn Se
  Title: self-acetylation mediated histone h3 lysine 56 acetylation by rtt109
  Author: y. a. yuan
  Keywords: dna damage, dna repair, nucleus, transcription, transcription regulation, transferase
  
• 2zkj.pdb. transferase 25-mar-08 2zkj Mg
  Title: crystal structure of human pdk4-adp complex
  Author: m. kato, r. m. wynn, j. l. chuang, s. -c. tso, j. li, d. t. chuang
  Keywords: homodimer, ghkl superfamily, carbohydrate metabolism, glucose metabolism, kinase, mitochondrion, phosphoprotein, transferase, transit peptide
  
• 2znr.pdb. hydrolase 01-may-08 2znr Pr Zn
  Title: crystal structure of the dub domain of human amsh-lp
  Author: y. sato, y. azusa, a. yamagata, h. mimura, x. wang, m. yamashita, k. ookata, o. nureki, k. iwai, m. komada, s. fukai
  Keywords: alternative splicing, hydrolase, metal-binding, metalloprotease, protease, ubl conjugation pathway, zinc
  
• 2znv.pdb. hydrolase/signaling protein 01-may-08 2znv Zn
  Title: crystal structure of human amsh-lp dub domain in complex with lys63-linked ubiquitin dimer
  Author: y. sato, y. azusa, a. yamagata, h. mimura, x. wang, m. yamashita, k. ookata, o. nureki, k. iwai, m. komada, s. fukai
  Keywords: metal binding protein, alternative splicing, hydrolase, metal-binding, metalloprotease, protease, ubl conjugation pathway, zinc, cytoplasm, nucleus, phosphoprotein, hydrolase/signaling protein comple...
  
• 3b6o.pdb. hydrolase 29-oct-07 3b6o Li
  Title: structure of trex1 in complex with a nucleotide and an inhibitor ion (lithium)
  Author: m. brucet, j. querol-audi, i. fita, a. celada
  Keywords: dedd, exonuclease, dnaq, lithium, catalysis, inhibition, deoxy-thimidine monophosphate (dtmp), dna damage, dna repair, hydrolase, magnesium, nucleus, phosphorylation
  
• 3b6p.pdb. hydrolase 29-oct-07 3b6p Zn Na
  Title: structure of trex1 in complex with a nucleotide and inhibitor ions (sodium and zinc)
  Author: m. brucet, j. querol-audi, i. fita, a. celada
  Keywords: dedd, exonuclease, dnaq, sodium, zinc, catalysis, inhibition, deoxy-thimidine monophosphate (dtmp), dna damage, dna repair, hydrolase, magnesium, nucleus, phosphorylation
  
• 3b9s.pdb. cytokine 06-nov-07 3b9s
  Title: macrophage migration inhibitory factor (mif) complexed with inhibitor, 4-ipp.
  Author: s. zierow, g. crichlow, e. lolis
  Keywords: cytokine
  
• 3bap.pdb. rna binding protein 08-nov-07 3bap Se
  Title: crystal structure of the 25 kda subunit of human cleavage factor im
  Author: m. coseno, s. doublie
  Keywords: rna processing, cleavage factor, mrna processing, nucleus, phosphoprotein, rna-binding, rna binding protein
  
• 3bbb.pdb. transferase 09-nov-07 3bbb
  Title: crystal structure of the nm23-h2 transcription factor complex with dinucleotide d(ag)
  Author: a. weichsel, w. r. montfort
  Keywords: phosphorylation, transcription regulation, transferase
  
• 3bbc.pdb. transferase 09-nov-07 3bbc
  Title: crystal structure of r88a mutant of the nm23-h2 transcription factor
  Author: a. weichsel, w. r. montfort
  Keywords: phosphorylation, transcription regulation, transferase
  
• 3bbf.pdb. transferase 09-nov-07 3bbf Mg
  Title: crystal structure of the nm23-h2 transcription factor complex with gdp
  Author: a. weichsel, w. r. montfort
  Keywords: phosphorylation, transcription regulation, transferase
  
• 3bho.pdb. nuclear protein 28-nov-07 3bho
  Title: crystal structure of the 25kda subunit of human cleavage factor im
  Author: m. coseno, s. doublie
  Keywords: rna processing, cleavage factor, diadenosine tetraphosphate, mrna processing, nucleus, phosphoprotein, rna-binding, nuclear protein
  
• 3bip.pdb. transcription 30-nov-07 3bip
  Title: crystal structure of yeast spt16 n-terminal domain
  Author: a. p. vandemark, h. xin, l. mccullough, r. rawlins, s. bentley, a. heroux, s. j. david, c. p. hill, t. formosa
  Keywords: transcription regulation
  
• 3biq.pdb. transcription 30-nov-07 3biq
  Title: crystal structure of yeast spt16 n-terminal domain
  Author: a. p. vandemark, h. xin, l. mccullough, r. rawlins, s. bentley, a. heroux, s. j. david, c. p. hill, t. formosa
  Keywords: transcription regulation
  
• 3bit.pdb. transcription 30-nov-07 3bit Cl Se
  Title: crystal structure of yeast spt16 n-terminal domain
  Author: a. p. vandemark, h. xin, l. mccullough, r. rawlins, s. bentley, a. heroux, s. j. david, c. p. hill, t. formosa
  Keywords: transcription regulation
  
• 3bkk.pdb. hydrolase 07-dec-07 3bkk Cl Zn
  Title: tesis ace co-crystal structure with ketone ace inhibitor kaf
  Author: j. m. watermeyer, b. t. sewell
  Keywords: zinc
  
• 3bkl.pdb. hydrolase 07-dec-07 3bkl Cl Zn
  Title: tesis ace co-crystal structure with ketone ace inhibitor kaw
  Author: j. m. watermeyer, b. t. sewell
  Keywords: zinc
  
• 3boa.pdb. isomerase 17-dec-07 3boa
  Title: crystal structure of yeast protein disulfide isomerase.
  Author: g. tian, w. j. lennarz, h. schindelin
  Keywords: endoplasmic reticulum,molecular flexibility,protein folding,thioredoxin, glycoprotein, isomerase, redox-active center
  
• 3bog.pdb. antifreeze protein 17-dec-07 3bog Se
  Title: snow flea antifreeze protein quasi-racemate
  Author: b. l. pentelute, kent s. b. h. , z. p. gates, v. tereshko, a. a. kossiakoff, j. kurutz, j. dashnau, j. m. vaderkooi
  Keywords: sfafp, mirror image proteins, racemic protein crystallography, antifreeze protein
  
• 3boi.pdb. antifreeze protein 17-dec-07 3boi
  Title: snow flea antifreeze protein racemate
  Author: b. l. pentelute, kent s. b. h. , z. p. gates, v. tereshko, a. a. kossiakoff, j. kurutz, j. dashnau, j. m. vaderkooi
  Keywords: sfafp, mirror image proteins, racemic protein crystallography, antifreeze protein
  
• 3box.pdb. lyase 18-dec-07 3box Mg
  Title: crystal structure of l-rhamnonate dehydratase from salmonella typhimurium complexed with mg
  Author: a. a. fedorov, e. v. fedorov, j. m. sauder, s. k. burley, j. a. gerlt, s. c. almo, new york structural genomix research consortium (nysgxrc)
  Keywords: nysgxrc, target 9265a, clone name 9265a2bst6p1, l-rhamnonate dehydratase, psi-2, protein structure initiative, new york structural genomix research consortium, lyase
  
• 3bt7.pdb. transferase/rna 27-dec-07 3bt7
  Title: structure of e. coli 5-methyluridine methyltransferase trma in complex with 19 nucleotide t-arm analogue
  Author: a. alian, r. m. stroud, j. finer-moore
  Keywords: methyltransferase, trma, rumt, s-adenosyl-l- methionine, trna processing, transferase/rna complex
  
• 3byp.pdb. transport protein 16-jan-08 3byp
  Title: mode of action of a putative zinc transporter czrb
  Author: v. cherezov, v. srinivasan, d. m. e. szebenyi, m. caffrey
  Keywords: zinc transporter, transport protein
  
• 3byr.pdb. transport protein 16-jan-08 3byr Zn
  Title: mode of action of a putative zinc transporter czrb (zn form)
  Author: v. cherezov, v. srinivasan, d. m. e. szebenyi, m. caffrey
  Keywords: zinc transporter, transport protein
  
• 3c0j.pdb. lyase 21-jan-08 3c0j K
  Title: structure of e. coli dihydrodipicolinate synthase complexed with hydroxypyruvate
  Author: r. c. j. dobson
  Keywords: lysine biosynthase, amino- acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase, lysine biosynthesis, schiff base
  
• 3c2w.pdb. signaling protein 25-jan-08 3c2w
  Title: crystal structure of the photosensory core domain of p. aeruginosa bacteriophytochrome pabphp in the pfr state
  Author: x. yang, j. kuk, k. moffat
  Keywords: chromophore, kinase, phosphoprotein, photoreceptor protein, receptor, sensory transduction, transferase, signaling protein
  
• 3cco.pdb. deoxyribonucleic acid 26-feb-08 3cco K Na
  Title: structural adaptation and conservation in quadruplex-drug recognition
  Author: g. n. parkinson, s. neidle
  Keywords: dna, propeller, dimeric, human telomere parallel stranded, ligand, complex, naphthalene diimidine
  
• 3cdm.pdb. deoxyribonucleic acid 27-feb-08 3cdm K
  Title: structural adaptation and conservation in quadruplex-drug recognition
  Author: g. n. parkinson, s. neidle
  Keywords: dna, propeller, intramolecular, human telomere parallel stranded, ligand, complex
  
• 3ce3.pdb. transferase 28-feb-08 3ce3 F
  Title: crystal structure of the tyrosine kinase domain of the hepatocyte growth factor receptor c-met in complex with a pyrrolopyridinepyridone based inhibitor
  Author: j. sack
  Keywords: signal transduction, grb2, shc, atp-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene, transferase, transmembrane, tyrosine-protein kinase
  
• 3cgi.pdb. unknown function 05-mar-08 3cgi
  Title: crystal structure of the pduu shell protein from the pdu microcompartment
  Author: c. s. crowley, m. r. sawaya, t. o. yeates
  Keywords: beta barrel, bacterial microcompartment, propanediol, signaling protein, unknown function
  
• 3ckh.pdb. transferase 15-mar-08 3ckh
  Title: crystal structure of eph a4 receptor
  Author: j. h. shi, j. x. song
  Keywords: atp-binding, glycoprotein, kinase, membrane, nucleotide-binding, phosphoprotein, transferase, transmembrane, tyrosine-protein kinase
  
• 3cm0.pdb. transferase 20-mar-08 3cm0
  Title: crystal structure of adenylate kinase from thermus thermophilus hb8
  Author: n. nakagawa, n. kondo, r. masui, z. matsuda, i. iwamoto, s. yokoyama, s. kuramitsu, riken structural genomics/proteomics initiative (rsgi)
  Keywords: atp-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, riken structural genomics/proteomics initiative, rsgi
  
• 3cma.pdb. ribosome 21-mar-08 3cma Cl Sr Mg K Na Cd
  Title: the structure of cca and cca-phe-cap-bio bound to the large ribosomal subunit of haloarcula marismortui
  Author: m. simonovic, t. a. steitz
  Keywords: protein-protein complex, rna-rna complex, protein-rna complex, peptidyl-trna hydrolysis
  
• 3cme.pdb. ribosome 21-mar-08 3cme Cl Sr Mg K Na Cd
  Title: the structure of ca and cca-phe-cap-bio bound to the large ribosomal subunit of haloarcula marismortui
  Author: m. simonovic, t. a. steitz
  Keywords: protein-protein complex, rna-rna complex, protein-rna complex, hydrolysis of peptidyl-trna
  
• 3cpo.pdb. isomerase 31-mar-08 3cpo F
  Title: crystal structure of ketosteroid isomerase d40n with bound 2-fluorophenol
  Author: j. m. m. caaveiro, b. pybus, d. ringe, g. petsko
  Keywords: active site, binding, hydrogen bond, geometry, isomerase, lipid metabolism, steroid metabolism
  
• 3cvh.pdb. immune system 18-apr-08 3cvh
  Title: how tcr-like antibody recognizes mhc-bound peptide
  Author: t. mareeva, e. martinez-hackert, y. sykulev
  Keywords: tcr, glycoprotein, immune response, membrane, mhc i, transmembrane, acetylation, allergen, phosphoprotein, polymorphism, secreted, immunoglobulin domain, immune system
  
• 3cvi.pdb. immune system 18-apr-08 3cvi
  Title: how tcr-like antibody recognizes mhc-bound peptide
  Author: t. mareeva, e. martinez-hackert, y. sykulev
  Keywords: immune system
  
• 3cwl.pdb. protease inhibitor 22-apr-08 3cwl Cl
  Title: crystal structure of alpha-1-antitrypsin, crystal form b
  Author: c. j. morton, g. hansen, s. c. feil, j. j. adams, m. w. parker
  Keywords: blood coagulation
  
• 3cwm.pdb. protease inhibitor 22-apr-08 3cwm
  Title: crystal structure of alpha-1-antitrypsin complexed with citrate
  Author: c. j. morton, g. hansen, s. c. feil, j. j. adams, m. w. parker
  Keywords: blood coagulation
  
• 3cxo.pdb. lyase 24-apr-08 3cxo Mg
  Title: crystal structure of l-rhamnonate dehydratase from salmonella typhimurium complexed with mg and 3-deoxy-l- rhamnonate
  Author: a. a. fedorov, e. v. fedorov, j. f. rakus, b. k. hubbard, j. a. gerlt, s. c. almo
  Keywords: enolase superfamily, 3-deoxy-l- rhamnonate, lyase
  
• 3cxv.pdb. oxidoreductase 25-apr-08 3cxv Fe
  Title: crystal structure of the cytochrome p450 cyp121 a233g mutant from mycobacterium tuberculosis
  Author: d. leys
  Keywords: cyp121, mycobacterium tuberculosis, cytoplasm, heme, iron, metal-binding, monooxygenase, oxidoreductase
  
• 3cxx.pdb. oxidoreductase 25-apr-08 3cxx Fe
  Title: crystal structure of cytochrome p450 cyp121 f338h from m. tuberculosis
  Author: d. leys
  Keywords: cyp121, mycobacterium tuberculosis, cytoplasm, heme, iron, metal-binding, monooxygenase, oxidoreductase
  
• 3cxy.pdb. oxidoreductase 25-apr-08 3cxy Fe
  Title: crystal structure of the cytochrome p450 cyp121 p346l mutant from m. tuberculosis
  Author: d. leys
  Keywords: cyp121, mycobacterium tuberculosis, cytoplasm, heme, iron, metal-binding, monooxygenase, oxidoreductase
  
• 3cxz.pdb. oxidoreductase 25-apr-08 3cxz Fe
  Title: crystal structure of cytochrome p450 cyp121 r386l mutant from m. tuberculosis
  Author: d. leys
  Keywords: cyp121, mycobacterium tuberculosis, cytoplasm, heme, iron, metal-binding, monooxygenase, oxidoreductase
  
• 3cy0.pdb. oxidoreductase 25-apr-08 3cy0 Fe
  Title: crystal structure of cytochrome p450 cyp121 s237a mutant from mycobacterium tuberculosis
  Author: d. leys
  Keywords: cyp121, mycobacterium tuberculosis, cytoplasm, heme, iron, metal-binding, monooxygenase, oxidoreductase
  
• 3cy1.pdb. oxidoreductase 25-apr-08 3cy1 Fe
  Title: crystal structure of the cytochrome p450 cyp121 s279a mutant from m. tuberculosis
  Author: d. leys
  Keywords: cyp121, mycobacterium tuberculosis, cytoplasm, heme, iron, metal-binding, monooxygenase, oxidoreductase
  
• 3cyy.pdb. peptide binding protein 27-apr-08 3cyy
  Title: the crystal structure of zo-1 pdz2 in complex with the cx43 peptide
  Author: l. pan, m. zhang
  Keywords: alternative splicing, cell junction, membrane, phosphoprotein, polymorphism, sh3 domain, tight junction, gap junction, transmembrane, peptide binding protein
  
• 3d1m.pdb. signaling protein / cell adhesion 06-may-08 3d1m Zn Ca
  Title: crystal structure of sonic hedgehog bound to the third fniii domain of cdo
  Author: j. s. mclellan, d. j. leahy
  Keywords: signaling protein / cell adhesion complex
  
• 3d2r.pdb. transferase 08-may-08 3d2r Mg
  Title: crystal structure of pyruvate dehydrogenase kinase isoform 4 in complex with adp
  Author: m. kato, r. m. wynn, l. c. chuang, s. -c. tso, j. li, d. t. chuang
  Keywords: homodimer, ghkl superfamily, kinase, carbohydrate metabolism, glucose metabolism, mitochondrion, phosphoprotein, polymorphism, transferase, transit peptide
  
• 3d80.pdb. oxidoreductase 22-may-08 3d80
  Title: structural analysis of a holo enzyme complex of mouse dihydrofolate reductase with nadph and a ternary complex wtih the potent and selective inhibitor 2,4-diamino-6-(2'- hydroxydibenz[b,f]azepin-5-yl)methylpteridine
  Author: v. cody
  Keywords: nadp, one-carbon metabolism, oxidoreductase
  
• 3d84.pdb. oxidoreductase 22-may-08 3d84
  Title: structural analysis of a holo enzyme complex of mouse dihydrofolate reductase with nadph and a ternary complex with the potent and selective inhibitor 2.4-diamino-6-(-2'- hydroxydibenz[b,f]azepin-5-yl)methylpteridine
  Author: vivian cody
  Keywords: nadp, one-carbon metabolism, oxidoreductase
  
• 3d9c.pdb. hydrolase 27-may-08 3d9c Se
  Title: crystal structure ptp1b complex with aryl seleninic acid
  Author: m. abdo, s. liu, b. zhou, c. d. walls, s. knapp, z. -y. zhang
  Keywords: inhibitor, covalent bond, acetylation, endoplasmic reticulum, hydrolase, membrane, oxidation, phosphoprotein, polymorphism, protein phosphatase
  
• 3d9s.pdb. membrane protein 27-may-08 3d9s
  Title: human aquaporin 5 (aqp5)- high resolution x-ray structure
  Author: r. horsefield, k. norden, m. fellert, a. backmark, s. tornroth- horsefield, a. c. terwisscha van scheltinga, j. kvassman, p. kjellbom, u. johanson, r. neutze
  Keywords: aqp, aquaglyceroporin, membrane protein, water transport, x-ray diffraction, lipid, phosphatidylserine, psf, npa, ar/r, water channel, glycoprotein, membrane, transmembrane, transport
  
• 3dam.pdb. ligase 29-may-08 3dam Fe
  Title: crystal structure of allene oxide synthase
  Author: l. li, x. wang
  Keywords: fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding, oxylipin biosynthesis, ligase
  
• 3dan.pdb. lyase 29-may-08 3dan Fe
  Title: crystal structure of allene oxide synthase
  Author: l. li, x. wang
  Keywords: fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding, oxylipin biosynthesis
  
• 3dba.pdb. hydrolase 30-may-08 3dba
  Title: crystal structure of the cgmp-bound gaf a domain from the photoreceptor phosphodiesterase 6c
  Author: s. e. martinez, c. c. heikaus, r. e. klevit, j. a. beavo
  Keywords: 5' cgmp, gaf domain, cyclic nucleotide phosphodiesterase, cgmp, hydrolase, lipoprotein, membrane, prenylation, sensory transduction, vision
  
• 3dbm.pdb. lyase 01-jun-08 3dbm Fe
  Title: crystal structure of allene oxide synthase
  Author: l. li, x. wang
  Keywords: fatty acid biosynthesis, heme, iron, lipid synthesis, metal-binding, oxylipin biosynthesis, lyase
  
• 3ddk.pdb. transferase, viral protein 05-jun-08 3ddk Na
  Title: coxsackievirus b3 3dpol rna dependent rna polymerase
  Author: g. campagnola, m. h. weygandt, k. e. scoggin, o. b. peersen
  Keywords: viral polymerase, rna virus, transferase, viral protein
  
• 3dgc.pdb. cytokine/signaling protein 13-jun-08 3dgc Cl U
  Title: structure of il-22/il-22r1
  Author: b. c. jones, n. j. logsdon, m. r. walter
  Keywords: il-22r1, cytokine, receptor, signaling molecule, glycoprotein, polymorphism, secreted, membrane, transmembrane, cytokine/signaling protein complex
  
• 3dh7.pdb. isomerase 17-jun-08 3dh7
  Title: structure of t. thermophilus idi-2 in complex with ppi
  Author: j. de ruyck, j. wouters
  Keywords: idi, complex, isomerase, plasmid
  
• 3djl.pdb. oxidoreductase 23-jun-08 3djl Ca
  Title: crystal structure of alkylation response protein e. coli aidb
  Author: b. f. eichman, a. h. metz, t. bowles
  Keywords: beta-barrel, fad, flavoprotein, oxidoreductase
  
• 3dkt.pdb. structural protein/virus like particle 26-jun-08 3dkt
  Title: crystal structure of thermotoga maritima encapsulin
  Author: m. sutter, d. boehringer, s. gutmann, e. weber-ban, n. ban
  Keywords: structural protein/virus like particle complex
  
• 3dll.pdb. ribosome 27-jun-08 3dll Mg F Zn
  Title: the oxazolidinone antibiotics perturb the ribosomal peptidyl-transferase center and effect trna positioning
  Author: d. n. wilson, f. schluenzen, j. m. harms, a. l. starosta, s. r. connell, p. fucini
  Keywords: antibiotic, oxazolidinone, linezolid, ribonucleoprotein, ribosomal protein, rna-binding, rrna- binding, trna-binding, methylation, metal-binding, zinc, zinc-finger
  
• 3dpg.pdb. hydrolase/dna 08-jul-08 3dpg Ca
  Title: sgrai with noncognate dna bound
  Author: p. w. dunten, n. c. horton, e. j. little
  Keywords: base-pair mismatch, hydrolase/dna complex
  
• 3dpw.pdb. luminescent protein 09-jul-08 3dpw
  Title: structure of the yellow fluorescent protein citrine frozen at 1 atmosphere number 1: structure 1 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dpx.pdb. luminescent protein 09-jul-08 3dpx
  Title: structure of the yellow fluorescent protein citrine frozen at 5000 atmospheres: structure 26 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dpz.pdb. luminescent protein 09-jul-08 3dpz
  Title: structure of the yellow fluorescent protein citrine frozen at 4000 atmospheres number 3: structure 25 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dq1.pdb. luminescent protein 09-jul-08 3dq1
  Title: structure of the yellow fluorescent protein citrine frozen at 4000 atmospheres number 2: structure 24 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dq2.pdb. luminescent protein 09-jul-08 3dq2
  Title: structure of the yellow fluorescent protein citrine frozen at 4000 atmospheres number 1: structure 23 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dq3.pdb. luminescent protein 09-jul-08 3dq3
  Title: structure of the yellow fluorescent protein citrine frozen at 2500 atmospheres: structure 22 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dq4.pdb. luminescent protein 09-jul-08 3dq4
  Title: structure of the yellow fluorescent protein citrine frozen at 2000 atmospheres number 2: structure 20 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dq5.pdb. luminescent protein 09-jul-08 3dq5
  Title: structure of the yellow fluorescent protein citrine frozen at 1960 atmospheres: structure 19 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dq6.pdb. luminescent protein 09-jul-08 3dq6
  Title: structure of the yellow fluorescent protein citrine frozen at 1920 atmospheres number 2: structure 18 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dq7.pdb. luminescent protein 09-jul-08 3dq7
  Title: structure of the yellow fluorescent protein citrine frozen at 1920 atmospheres number 1: structure 17 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dq8.pdb. luminescent protein 09-jul-08 3dq8
  Title: structure of the yellow fluorescent protein citrine frozen at 1500 atmospheres number 2: structure 16 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dq9.pdb. luminescent protein 09-jul-08 3dq9
  Title: structure of the yellow fluorescent protein citrine frozen at 1500 atmospheres number 1: structure 15 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dqa.pdb. luminescent protein 09-jul-08 3dqa
  Title: structure of the yellow fluorescent protein citrine frozen at 1250 atmospheres number 4: structure 14 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dqb.pdb. signaling protein 09-jul-08 3dqb
  Title: crystal structure of the active g-protein-coupled receptor opsin in complex with a c-terminal peptide derived from the galpha subunit of transducin
  Author: p. scheerer, j. h. park, p. w. hildebrand, y. j. kim, n. krauss, h. - w. choe, k. p. hofmann, o. p. ernst
  Keywords: g-protein-coupled receptor, rhodopsin, opsin
  
• 3dqc.pdb. luminescent protein 09-jul-08 3dqc
  Title: structure of the yellow fluorescent protein citrine frozen at 1250 atmospheres number 3: structure 13 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dqd.pdb. luminescent protein 09-jul-08 3dqd
  Title: structure of the yellow fluorescent protein citrine frozen at 1250 atmospheres number 2: structure 12 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dqe.pdb. luminescent protein 09-jul-08 3dqe
  Title: structure of the yellow fluorescent protein citrine frozen at 1250 atmospheres number 1: structure 11 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dqf.pdb. luminescent protein 09-jul-08 3dqf
  Title: structure of the yellow fluorescent protein citrine frozen at 1000 atmospheres number 6: structure 10 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dqh.pdb. luminescent protein 09-jul-08 3dqh
  Title: structure of the yellow fluorescent protein citrine frozen at 1000 atmospheres number 5: structure 9 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dqi.pdb. luminescent protein 09-jul-08 3dqi
  Title: structure of the yellow fluorescent protein citrine frozen at 1000 atmospheres number 4: structure 8 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dqj.pdb. luminescent protein 09-jul-08 3dqj
  Title: structure of the yellow fluorescent protein citrine frozen at 1000 atmospheres number 3: structure 7 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dqk.pdb. luminescent protein 09-jul-08 3dqk
  Title: structure of the yellow fluorescent protein citrine frozen at 1000 atmospheres number 2: structure 6 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dql.pdb. luminescent protein 09-jul-08 3dql
  Title: structure of the yellow fluorescent protein citrine frozen at 1000 atmospheres number 1: structure 5 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dqm.pdb. luminescent protein 09-jul-08 3dqm
  Title: structure of the yellow fluorescent protein citrine frozen at 750 atmospheres: structure 4 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dqn.pdb. luminescent protein 09-jul-08 3dqn
  Title: structure of the yellow fluorescent protein citrine frozen at 500 atmospheres: structure 3 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dqo.pdb. luminescent protein 09-jul-08 3dqo
  Title: structure of the yellow fluorescent protein citrine frozen at 1 atmosphere number 2: structure 2 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dqu.pdb. luminescent protein 09-jul-08 3dqu
  Title: structure of the yellow fluorescent protein citrine frozen at 2000 atmospheres number 1: structure 20 in a series of 26 high pressure structures
  Author: b. barstow, c. u. kim
  Keywords: beta barrel, chromophore, fluorescent protein, high pressure, luminescence, photoprotein, luminescent protein
  
• 3dqw.pdb. transferase 09-jul-08 3dqw Mg
  Title: c-src kinase domain thr338ile mutant in complex with atpgs
  Author: m. azam, m. a. seeliger, n. gray, j. kuriyan, g. q. daley
  Keywords: kinase, active, gatekeeper, alternative splicing, atp- binding, lipoprotein, myristate, nucleotide-binding, phosphoprotein, proto-oncogene, sh2 domain, sh3 domain, transferase, tyrosine-protein kinas...
  
• 3dqx.pdb. transferase 09-jul-08 3dqx
  Title: chicken c-src kinase domain in complex with atpgs
  Author: m. azam, m. a. seeliger, n. gray, j. kuriyan, g. q. daley
  Keywords: kinase, active, alternative splicing, atp-binding, lipoprotein, myristate, nucleotide-binding, phosphoprotein, proto-oncogene, sh2 domain, sh3 domain, transferase, tyrosine-protein kinase
  
• 3dsi.pdb. lyase 12-jul-08 3dsi Fe
  Title: crystal structure of arabidopsis thaliana allene oxide synthase (aos, cytochrome p450 74a, cyp74a) complexed with 13(s)-hot at 1.60 a resolution
  Author: d. s. lee, p. nioche, c. s. raman
  Keywords: lyase, chloroplast, fatty acid biosynthesis, heme, iron, lipid synthesis, metal-binding, oxylipin biosynthesis, plastid, transit peptide
  
• 3dsj.pdb. lyase 12-jul-08 3dsj Fe
  Title: crystal structure of arabidopsis thaliana allene oxide synthase variant (f137l) (at-aos(f137l), cytochrome p450 74a, cyp74a) complexed with 13(s)-hod at 1.60 a resolution
  Author: d. s. lee, p. nioche, c. s. raman
  Keywords: lyase, chloroplast, fatty acid biosynthesis, heme, iron, lipid synthesis, metal-binding, oxylipin biosynthesis, plastid, transit peptide
  
• 3dsk.pdb. lyase 12-jul-08 3dsk Fe
  Title: crystal structure of arabidopsis thaliana allene oxide synthase variant (f137l) (at-aos(f137l), cytochrome p450 74a, cyp74a) complexed with 12r,13s-vernolic acid at 1.55 a resolution
  Author: d. s. lee, p. nioche, c. s. raman
  Keywords: chloroplast, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding, oxylipin biosynthesis, plastid, transit peptide
  
• 3dvo.pdb. hydrolase/dna 18-jul-08 3dvo Ca
  Title: sgrai with cognate dna and calcium bound
  Author: p. w. dunten, n. c. horton, e. j. little
  Keywords: hydrolase/dna complex
  
• 3dw9.pdb. hydrolase/dna 21-jul-08 3dw9 Mn
  Title: sgrai with cognate dna and manganese bound
  Author: p. w. dunten, n. c. horton, e. j. little
  Keywords: hydrolase/dna complex
  
• 3dwg.pdb. transferase 22-jul-08 3dwg
  Title: crystal structure of a sulfur carrier protein complex found in the cysteine biosynthetic pathway of mycobacterium tuberculosis
  Author: c. t. jurgenson, k. e. burns, t. p. begley, s. e. ealick
  Keywords: beta-grasp fold, amino-acid biosynthesis, cysteine biosynthesis, pyridoxal phosphate, transferase
  
• 3dwi.pdb. transferase 22-jul-08 3dwi
  Title: crystal structure of mycobacterium tuberculosis cysm, the cysteine synthase b
  Author: c. t. jurgenson, k. e. burns, t. p. begley, s. e. ealick
  Keywords: amino-acid biosynthesis, cysteine biosynthesis, pyridoxal phosphate, transferase
  
• 3dwm.pdb. transferase 22-jul-08 3dwm
  Title: crystal structure of mycobacterium tuberculosis cyso, an antigen
  Author: c. t. jurgenson, k. e. burns, t. p. begley, s. e. ealick
  Keywords: sulfur carrier protein, transferase
  
• 3dy8.pdb. hydrolase 25-jul-08 3dy8 Mg Mn
  Title: human phosphodiesterase 9 in complex with product 5'-gmp (e+p complex)
  Author: s. liu, m. n. mansour, k. dillman, j. perez, d. danley, f. menniti
  Keywords: enzyme mechanism, alternative splicing, cgmp, hydrolase, manganese, metal-binding, phosphoprotein
  
• 3dyl.pdb. hydrolase 28-jul-08 3dyl Mg Mn
  Title: human phosphdiesterase 9 substrate complex (es complex)
  Author: s. liu, m. n. mansour, k. dillman, j. perez, d. danley, f. menniti
  Keywords: phosphodiesterase, enzyme mechanism, alternative splicing, cgmp, hydrolase, manganese, metal- binding, phosphoprotein
  
• 3dyn.pdb. hydrolase 28-jul-08 3dyn Mg Zn
  Title: human phosphodiestrase 9 in complex with cgmp (zn inhibited)
  Author: s. liu, m. n. mansour, k. dillman, j. perez, d. danley, f. menniti
  Keywords: phophodiestrase, enzyme mechanism, alternative splicing, cgmp, hydrolase, manganese, metal- binding, phosphoprotein
  
• 3dyq.pdb. hydrolase 28-jul-08 3dyq Na
  Title: human phosphodiestrase 9 (inhibited by omitting divalent cation) in complex with cgmp
  Author: s. liu, m. n. mansour, k. dillman, j. perez, d. danley, f. menniti
  Keywords: phosphodiesterase, enzyme mechanism, alternative splicing, cgmp, hydrolase, manganese, metal- binding, phosphoprotein
  
• 3dys.pdb. hydrolase 28-jul-08 3dys Mg Mn
  Title: human phosphodiestrase-5'gmp complex (ep), produced by soaking with 20mm cgmp+20 mm mncl2+20 mm mgcl2 for 2 hours, and flash-cooled to liquid nitrogen temperature when substrate was still abudant.
  Author: s. liu, m. n. mansour, k. dillman, j. perez, d. danley, f. menniti
  Keywords: enzyme mechanism, alternative splicing, cgmp, hydrolase, manganese, metal-binding, phosphoprotein
  
• 3dze.pdb. electron transport 29-jul-08 3dze Mg Cd
  Title: crystal structure of bovine coupling factor b bound with cadmium
  Author: j. k. lee, r. m. stroud, g. i. belogrudov
  Keywords: cf(0), hydrogen ion transport, ion transport, membrane, mitochondrion, mitochondrion inner membrane, transit peptide, transport, transport protein, electron transport
  
• 3e07.pdb. cytokine 31-jul-08 3e07
  Title: crystal structure of spatzle cystine knot
  Author: a. hoffmann, a. funkner, p. neumann, s. juhnke, m. walther, a. schierhorn, u. weininger, j. balbach, g. reuter, m. t. stubbs, berkeley structural genomics center (bsgc)
  Keywords: toll ligand, structural genomics, berkeley structural genomics center, bsgc, alternative splicing, antimicrobial, cytokine, developmental protein, fungicide, glycoprotein, secreted
  
• 3e0d.pdb. transferase/dna 31-jul-08 3e0d Ca
  Title: insights into the replisome from the crystral structure of the ternary complex of the eubacterial dna polymerase iii alpha-subunit
  Author: r. a. wing, s. bailey, t. a. steitz
  Keywords: nucleotidyl transferase, polymerase, beta barrel, cytoplasm, dna replication, dna-directed dna polymerase, nucleotidyltransferase, transferase, transferase/dna complex
  
• 3e0g.pdb. signaling protein/cytokine 31-jul-08 3e0g
  Title: structure of the leukemia inhibitory factor receptor (lif- r) domains d1-d5
  Author: p. j. lupardus, k. c. garcia
  Keywords: signaling protein/cytokine complex
  
• 3e0v.pdb. transferase 01-aug-08 3e0v
  Title: crystal structure of pyruvate kinase from leishmania mexicana in complex with sulphate ions
  Author: l. b. tulloch, l. a. gillmore, m. d. walkinshaw
  Keywords: kinase, nad+ nadh, adp, atp, phosphoenolpyruvate, pep, glycolysis, trypanosomatid, leishmania, mexicana, allosteric enzyme, magnesium, metal-binding, transferase
  
• 3e0w.pdb. transferase 01-aug-08 3e0w
  Title: crystal structure of pyruvate kinase from leishmania mexicana
  Author: l. b. tulloch, l. a. gillmore, m. d. walkinshaw
  Keywords: kinase, nad+ nadh, adp, atp, phosphoenolpyruvate, pep, glycolysis, trypanosomatid, leishmania, mexicana, allosteric enzyme, magnesium, metal-binding, transferase
  
• 3e2j.pdb. electron transport 05-aug-08 3e2j Mg
  Title: crystal structure of bovine coupling factor b
  Author: r. m. stroud, j. k. lee, g. i. belogrudov
  Keywords: cf0, hydrogen ion transport, inner membrane, ion transport, membrane, mitochondrion, transit peptide, transport, electron transport
  
• 3e3z.pdb. electron transport 08-aug-08 3e3z Mg As
  Title: crystal structure of bovine coupling factor b bound with phenylarsine oxide
  Author: r. m. stroud, j. k. lee, g. i. belogrudov
  Keywords: cf0, hydrogen ion transport, inner membrane, ion transport, membrane, mitochondrion, transit peptide, transport, electron transport
  
• 3e4g.pdb. electron transport 11-aug-08 3e4g Mg
  Title: crystal structure of bovine coupling factor b, g28e mutant
  Author: r. m. stroud, j. k. lee, g. i. belogrudov
  Keywords: cf0, hydrogen ion transport, inner membrane, ion transport, membrane, mitochondrion, transit peptide, transport, electron transport
  
• 3e4r.pdb. transport protein 12-aug-08 3e4r
  Title: crystal structure of the alkanesulfonate binding protein (ssua) from the phytopathogenic bacteria xanthomonas axonopodis pv. citri bound to hepes
  Author: a. balan, f. t. araujo, m. sanches, d. y. chirgadze, t. b. blundell, j. a. r. g. barbosa
  Keywords: substrate-binding protein domain, transport protein, alkanesulfonate-binding protein
  
• 3e5t.pdb. fluorescent protein 14-aug-08 3e5t
  Title: crystal structure analysis of fp611
  Author: h. nar, k. nienhaus, u. nienhaus, j. wiedenmann
  Keywords: luminescence, photoprotein, red fluorescent protein
  
• 3e5v.pdb. fluorescent protein 14-aug-08 3e5v
  Title: crystal structure analysis of eqfp611 double mutant t122r, n143s
  Author: h. nar, k. nienhaus, u. nienhaus, j. wiedenmann
  Keywords: luminescence, photoprotein, d2rfp630, cis- trans isomer, red fluorescent protein
  
• 3e5w.pdb. fluorescent protein 14-aug-08 3e5w
  Title: crystal structure analysis of fp611
  Author: h. nar, k. nienhaus, u. nienhaus, j. wiedenmann
  Keywords: luminescence, photoprotein, rfp639, eqfp611, cis trans isomer, red fluorescent protein
  
• 3e6i.pdb. oxidoreductase 15-aug-08 3e6i Fe
  Title: human cytochrome p450 2e1 in complex with the inhibitor indazole
  Author: p. r. porubsky, k. m. meneely, e. e. scott
  Keywords: p450 2e1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane, metal-binding, microsome
  
• 3e7k.pdb. membrane protein 18-aug-08 3e7k
  Title: crystal structure of an antiparallel coiled-coil tetramerization domain from trpm7 channels
  Author: y. fujiwara, d. l. minor
  Keywords: antiparallel, ion channel, assembly domain, trpm channel, trpm7, membrane protein
  
• 3e9q.pdb. oxidoreductase 23-aug-08 3e9q Zn Se
  Title: crystal structure of the short chain dehydrogenase from shigella flexneri
  Author: y. kim, x. xu, h. cui, a. savchenko, a. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, oxidoreductase
  
• 3e9x.pdb. metal binding protein 24-aug-08 3e9x Zn Fe
  Title: crystal structure of the complex of c-lobe of lactoferrin with nimesulide at 2.7 a resolution
  Author: r. mir, k. balaji, g. vikram, m. sinha, n. singh, a. bhushan, p. kaur, s. sharma, t. p. singh
  Keywords: metal binding protein
  
• 3ea0.pdb. hydrolase 24-aug-08 3ea0 Mg Se
  Title: crystal structure of para family atpase from chlorobium tepidum tls
  Author: y. kim, c. tesar, s. clancy, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, hydrolase
  
• 3eau.pdb. transport protein, oxidoreductase 26-aug-08 3eau
  Title: voltage-dependent k+ channel beta subunit in complex with cortisone
  Author: y. pan, j. weng, v. kabaleeswaran, h. li, y. cao, r. c. bhosle, m. zhou
  Keywords: cortisone, nadph, cytoplasm, ion transport, ionic channel, nadp, phosphoprotein, potassium, potassium transport, transport, voltage-gated channel, transport protein, oxidoreductase
  
• 3eb3.pdb. transport protein, oxidoreductase 26-aug-08 3eb3
  Title: voltage-dependent k+ channel beta subunit (w121a) in complex with cortisone
  Author: y. pan, j. weng, v. kabaleeswaran, h. li, y. cao, r. c. bhosle, m. zhou
  Keywords: cortisone, interface, cytoplasm, ion transport, ionic channel, nadp, phosphoprotein, potassium, potassium transport, transport, voltage-gated channel, transport protein, oxidoreductase
  
• 3eb4.pdb. transport protein, oxidoreductase 26-aug-08 3eb4
  Title: voltage-dependent k+ channel beta subunit (i211r) in complex with cortisone
  Author: y. pan, j. weng, v. kabaleeswaran, h. li, y. cao, r. c. bhosle, m. zhou
  Keywords: cortisone, interface, cytoplasm, ion transport, ionic channel, nadp, phosphoprotein, potassium, potassium transport, transport, voltage-gated channel, transport protein, oxidoreductase
  
• 3ebs.pdb. oxidoreductase 28-aug-08 3ebs Fe
  Title: human cytochrome p450 2a6 i208s/i300f/g301a/s369g in complex with phenacetin
  Author: n. m. devore, e. e. scott
  Keywords: p450 2a6, cyp2a13, p450 2a13, monooxygenase, oxidoreducatase, heme, endoplasmic reticulum, iron, membrane, metal-binding, microsome, phenacetin, oxidoreductase, polymorphism
  
• 3ec7.pdb. oxidoreductase 29-aug-08 3ec7 K Se
  Title: crystal structure of putative dehydrogenase from salmonella typhimurium lt2
  Author: y. kim, e. evdokimova, m. kudritska, a. savchenko, a. edwards, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, unknown function, oxidoreductase
  
• 3ed6.pdb. oxidoreductase 02-sep-08 3ed6 Mg
  Title: 1.7 angstrom resolution crystal structure of betaine aldehyde dehydrogenase (betb) from staphylococcus aureus
  Author: a. s. halavaty, l. shuvalova, g. minasov, i. dubrovska, j. winsor, s. n. peterson, w. f. anderson, center for structural genomics of infectious deseases (csgid), center for structural genomics of infectious diseases (csgid)
  Keywords: structural genomics, infectious deseases, nad, oxidoreductase, psi, protein structure initiative, center for structural genomics of infectious diseases, csgid
  
• 3edg.pdb. hydrolase 03-sep-08 3edg Zn
  Title: crystal structure of bone morphogenetic protein 1 protease domain
  Author: a. mac sweeney
  Keywords: metal- binding, metalloprotease, osteogenesis, polymorphism, protease, zinc, zymogen
  
• 3edh.pdb. hydrolase 03-sep-08 3edh Zn
  Title: crystal structure of bone morphogenetic protein 1 protease domain in complex with partially bound dmso
  Author: a. mac sweeney
  Keywords: metal- binding, metalloprotease, osteogenesis, polymorphism, protease, zinc, zymogen
  
• 3edi.pdb. hydrolase 03-sep-08 3edi Zn
  Title: crystal structure of tolloid-like protease 1 (tll-1) protease domain
  Author: a. mac sweeney
  Keywords: alternative splicing, calcium, developmental protein, differentiation, egf-like domain, glycoprotein, hydrolase, metal-binding, metalloprotease, polymorphism, protease, secreted, zinc, zymogen
  
• 3eds.pdb. hydrolase 03-sep-08 3eds Br
  Title: crystal structure of a mut/nudix family protein from bacillus thuringiensis
  Author: k. palani, d. kumaran, s. k. burley, s. swaminathan, new york sgx research center for structural genomics (nysgxrc)
  Keywords: mut/nudix protein, protein structure initiative ii(psi ii), nysgxrc, 11181d, structural genomics, new york sgx research center for structural genomics, hydrolase
  
• 3edz.pdb. hydrolase 03-sep-08 3edz Zn
  Title: crystal structure of catalytic domain of tace with hydroxamate inhibitor
  Author: r. d. mazzola, z. zhu, l. sinning, b. mckittrick, b. lavey, j. spitler, j. kozlowski, s. neng-yang, g. zhou, z. guo, p. orth, v. madison, j. sun, d. lundell, x. niu
  Keywords: transmembrane, zinc, zymogen
  
• 3efa.pdb. transferase 08-sep-08 3efa Se
  Title: crystal structure of putative n-acetyltransferase from lactobacillus plantarum
  Author: c. chang, h. li, g. cobb, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: lactobacillus plantarum, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, transferase
  
• 3efb.pdb. transcription 08-sep-08 3efb Se
  Title: crystal structure of probable sor operon regulator from shigella flexneri
  Author: y. kim, e. evdokimova, m. kudritska, a. savchenko, a. edwards, a. joachimiak, center for structural genomics of infectious diseases (csgid)
  Keywords: center for structural genomics of infectious diseases, csgid, transcription
  
• 3efe.pdb. chaperone 08-sep-08 3efe
  Title: the crystal structure of the thij/pfpi family protein from bacillus anthracis
  Author: r. zhang, x. xu, h. cui, a. savchenko, a. edwards, w. anderson, a. joachimiak, center for structural genomics of infectious diseases (csgid)
  Keywords: bacillus anthracis, structural genomics, csgid, center for structural genomics of infectious diseases, chaperone
  
• 3efx.pdb. toxin 10-sep-08 3efx
  Title: novel binding site identified in a hybrid between cholera toxin and heat-labile enterotoxin, 1.9a crystal structure reveals the details
  Author: a. holmner, m. lebens, s. teneberg, j. angstrom, m. okvist, u. krengel
  Keywords: cholera toxin, heat-labile enterotoxin, blood group antigen
  
• 3efz.pdb. signaling protein 10-sep-08 3efz
  Title: crystal structure of a 14-3-3 protein from cryptosporidium parvum (cgd1_2980)
  Author: a. k. wernimont, a. dong, w. qiu, j. lew, g. a. wasney, m. vedadi, i. kozieradzki, y. zhao, h. ren, z. alam, l. y. lin, m. sundstrom, j. weigelt, c. h. arrowsmith, a. m. edwards, a. bochkarev, r. hui, s. brokx, structural genomics consortium (sgc)
  Keywords: cell regulation, signaling protein, structural genomics, structural genomics consortium, sgc
  
• 3eg4.pdb. transferase 10-sep-08 3eg4
  Title: crystal structure of 2,3,4,5-tetrahydropyridine-2- carboxylate n-succinyltransferase from brucella melitensis biovar abortus 2308
  Author: seattle structural genomics center for infectious disease (ssgcid)
  Keywords: seattle structural genomics center for infectious disease
  
• 3egj.pdb. hydrolase 10-sep-08 3egj Ni
  Title: n-acetylglucosamine-6-phosphate deacetylase from vibrio cholerae.
  Author: j. osipiuk, n. maltseva, j. stam, w. f. anderson, a. joachimiak, center for structural genomics of infectious diseases (csgid)
  Keywords: carbohydrate metabolism, idp01616, hydrolase, structural genomics, center for structural genomics of infectious diseases, csgid
  
• 3egl.pdb. structural genomics, unknown function 11-sep-08 3egl Se
  Title: crystal structure of degv family protein cg2579 from corynebacterium glutamicum
  Author: y. kim, c. tesar, j. abdullah, a. joachimiak, midwest center for structural genomics (mcsg)
  Keywords: methylated lysines, structural genomics, psi-2, protein structure initiative, midwest center for structural genomics, mcsg, unknown function
  
• 3egv.pdb. transferase/ribosomal protein 11-sep-08 3egv Cl I
  Title: ribosomal protein l11 methyltransferase (prma) in complex with trimethylated ribosomal protein l11
  Author: h. demirci, s. t. gregory, a. e. dahlberg, g. jogl
  Keywords: multiple methyltransferase, cytoplasm, methyltransferase, transferase, methylation, ribonucleoprotein, ribosomal protein, rna-binding, rrna- binding, transferase/ribosomal protein complex
  
• 3ehc.pdb. structural genomics, unknown function 12-sep-08 3ehc Se
  Title: crystal structure of snoal-like polyketide cyclase (17741376) from agrobacterium tumefaciens str. c58 (dupont) at 2.12 a resolution
  Author: joint center for structural genomics (jcsg)
  Keywords: snoal-like polyketide cyclase, structural genomics, joint center for structural genomics, jcsg, protein structure initiative, psi-2, unknown function