Cerius²·Ludi

6       Tutorials contents

The following tutorials are designed to introduce you to all of the typical applications of Ludi.

1.   Tutorial lesson 1: de novo inhibitor design for trypsin

In this tutorial you use Ludi to search for fragments that can bind to trypsin, a proteolytic enzyme.

In this tutorial you use Ludi to search for fragments that can be linked to a known HIV protease inhibitor to make a new inhibitor.

In this tutorial you use the Ludi targeted mode to search for fragments that can bind to the zinc atom in carbonic anhydrase.

In this tutorial you use Ludi to design a novel ligand for the HMG CoA system.

In this tutorial you add a new entry to a Ludi library and then use that library and library filtering in a search for fragments that can bind to trypsin.