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Scripps Research Study Reveals New Activation Mechanism for Pain Sensing Channel

First-Time Findings Describe Potential New Pain Therapy Target

LA JOLLA, CA, January 21, 2007—A group of scientists at The Scripps Research Institute has identified a mechanism that enables certain compounds to activate a pain sensing protein. The findings could lead to the development of potential new therapies for managing acute and chronic pain.

The study was published January 21, 2007 in an advanced online edition of the journal Nature.

The researchers found that TRPA1, a protein that helps transmit pain signals, is a direct sensor of reactive chemicals. “While many noxious and pungent compounds were known to activate this pain receptor, we discovered that they do so by directly and irreversibly binding to the cysteine amino acids of this protein,” said Ardem Patapoutian, a Scripps Research scientist whose laboratory conducted the study. “Our study shows that TRPA1 activation is directly linked to chemical insult.”

“Cysteines, one of the twenty building blocks of all proteins, are known to undergo oxidation/reduction reactions,” Patapoutian continued. “Somehow the TRPA1 protein is tuned to sense cysteine modifications. In fact, any cysteine reactive agent seems to activate TRPA1, although we don’t know exactly how cysteine binding translates into ion channel activation.”

But this activation mechanism comes with an interesting property.

“Generally, compounds that activate ion channels bind in a lock-and-key mechanism that is readily reversible,” said Lindsey Macpherson, another author of the study and a Ph.D. candidate in the Scripps Research Kellogg School of Science and Technology. “The mechanism by which noxious compounds activate TRPA1 is unique. For example, compounds that activate an ion channels through a lock-and-key mechanism have structural similarity. TRPA1 activators have no structural similarity; instead, they share a common potential for chemical reactivity, and their binding is long-lasting.”

TRPA1 is not unique among proteins to be activated by cysteine modifying agents, the study noted. Another signaling protein known as Kelch-like ECH-associated protein 1 (KEAP1) is activated by many of the same compounds that activate TRPA1; KEAP1 is a sensor for oxidative damage from free radicals and upregulates expression of antioxidant enzymes. Apparently, reactive compounds can activate at least two pathways through cysteine modification as a warning against cell damage, the study concluded.

“Our findings, which are the result of a successful collaboration with the Ben Cravatt and Peter Schultz labs at Scripps Research, show that modification of reactive cysteines within TRPA1 can cause channel activation,” Macpherson said. “Our research efforts are now aimed at further understanding how binding of these compounds activate the channel, and identifying the physiological role of TRPA1 in sensing oxidative stress.” The protein is currently being investigated by several pharmaceutical companies as a potential target for chronic pain, Patapoutian noted.

Other authors of the study, Noxious Compounds Activate TRPA1 Ion Channels Through Covalent Modification Of Cysteines, are Adrienne E. Dubin, Michael J. Evans, Felix Marr, and Benjamin F. Cravatt of The Scripps Research Institute; and Peter G. Schultz of The Scripps Research Institute and Genomics Institute of the Novartis Research Foundation.

The study was supported by the National Institutes of Health and the Novartis Research Foundation.

About The Scripps Research Institute

The Scripps Research Institute is one of the world's largest independent, non-profit biomedical research organizations, at the forefront of basic biomedical science that seeks to comprehend the most fundamental processes of life. Scripps Research is internationally recognized for its discoveries in immunology, molecular and cellular biology, chemistry, neurosciences, autoimmune, cardiovascular, and infectious diseases, and synthetic vaccine development. Established in its current configuration in 1961, it employs approximately 3,000 scientists, postdoctoral fellows, scientific and other technicians, doctoral degree graduate students, and administrative and technical support personnel. Scripps Research is headquartered in La Jolla, California. It also includes Scripps Florida, whose researchers focus on basic biomedical science, drug discovery, and technology development. Currently operating from temporary facilities in Jupiter, Scripps Florida will move to its permanent campus in 2009.

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