2010 & Previous Lab Publications

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1. Dynamic changes in the human methylome during differentiation
   Laurent L, Wong E, Li G, Huynh T, Tsirigos A, Ong CT, Low HM, Kin Sung KW, Rigoutsos I, Loring J, Wei CL. - Genome Res. 2010 Mar;20(3):320-31. Epub 2010 Feb 4.PMID: 20133333 [PubMed - in process]  Related articles    Free article
   
2. Friedreich's ataxia induced pluripotent stem cells model intergenerational GAA TTC triplet repeat instability.
   Ku S, Soragni E, Campau E, Thomas EA, Altun G, Laurent LC, Loring JF, Napierala M, Gottesfeld JM. - Cell Stem Cell. 2010 Nov 5;7(5):631-7.  PMID: 21211785 [PubMed - in process]  Related Citations
   
3. Growth of an industry: how U.S. scientists and clinicians have enabled stem cell tourism.
   Devereaux M, Loring JF.
   Am J Bioeth. 2010 May;10(5):45-6. No abstract available.   PMID: 20461650 [PubMed - indexed for MEDLINE] Related citations
   
4. A call to standardize teratoma assays used to define human pluripotent cell lines.
   Müller FJ, Goldmann J, Löser P, Loring JF.
   Cell Stem Cell. 2010 May 7;6(5):412-4.
   PMID: 20452314 [PubMed - indexed for MEDLINE]  Related citations
   
5. A 3-dimensional extracellular matrix as a delivery system for the transplantation of glioma-targeting neural stem/progenitor cells.
   Hansen K, Müller FJ, Messing M, Zeigler F, Loring JF, Lamszus K, Westphal M, Schmidt NO.- Neuro Oncol. 2010 Feb 14. [Epub ahead of print] PMID: 20156807 [PubMed - as supplied by publisher]   Related articles
   
6. A modest proposal in response to Rhodes and Schiano.
   Devereaux M, Loring JF.Am J Bioeth. 2010 Feb;10(2):20-2. No abstract available. PMID: 20131166 [PubMed - indexed for MEDLINE]  Related articles
   
7. Propagation of human embryonic and induced pluripotent stem cells in an indirect co-culture system.
   Abraham S, Sheridan SD, Laurent LC, Albert K, Stubban C, Ulitsky I, Miller B, Loring JF, Rao RR.- Biochem Biophys Res Commun. 2010 Mar 5;393(2):211-6. Epub 2010 Feb 1.PMID: 20117095 [PubMed - indexed for MEDLINE]  Related articles
   
8. Restricted ethnic diversity in human embryonic stem cell lines.
   Laurent LC, Nievergelt CM, Lynch C, Fakunle E, Harness JV, Schmidt U, Galat V, Laslett AL, Otonkoski T, Keirstead HS, Schork A, Park HS, Loring JF.  Nat Methods. 2010 Jan;7(1):6-7. No abstract available. PMID: 20038950 [PubMed - indexed for MEDLINE] Related articles
   
9. DNA methylation in embryonic stem cells.
   Altun G, Loring JF, Laurent LC.
   J Cell Biochem. 2010 Jan 1;109(1):1-6. Review.PMID: 19899110 [PubMed - indexed for MEDLINE] Related articles
   
10. Neural stem cells improve cognition via BDNF in a transgenic model of Alzheimer disease.
    Blurton-Jones M, Kitazawa M, Martinez-Coria H, Castello NA, Müller FJ, Loring JF, Yamasaki TR, Poon WW, Green KN, LaFerla FM.
    Proc Natl Acad Sci U S A. 2009 Aug 11;106(32):13594-9. Epub 2009 Jul 24.PMID: 19633196 [PubMed - indexed for MEDLINE] Related articles    Free article 
11. Preparation of autogenic human feeder cells for growth of human embryonic stem cells.
    Gonzalez R, Loring JF, Snyder EY.
    Curr Protoc Stem Cell Biol. 2008 Mar;Chapter 1:Unit 1C.5.1-1C.5.15.PMID: 18770638 [PubMed - indexed for MEDLINE] Related articles 
12. Regulatory networks define phenotypic classes of human stem cell lines.
    Müller FJ, Laurent LC, Kostka D, Ulitsky I, Williams R, Lu C, Park IH, Rao MS, Shamir R, Schwartz PH, Schmidt NO, Loring JF.
    Nature. 2008 Sep 18;455(7211):401-5. Epub 2008 Aug 24.PMID: 18724358 [PubMed - indexed for MEDLINE] Related articles    Free article
    
13. Differentiation of neural lineage cells from human pluripotent stem cells.
    Schwartz PH, Brick DJ, Stover AE, Loring JF, Müller FJ.
    Methods. 2008 Jun;45(2):142-58. Epub 2008 May 29. Review.PMID: 18593611 [PubMed - indexed for MEDLINE] Related articles   Free article
    
14. The ACTCellerate initiative: large-scale combinatorial cloning of novel human embryonic stem cell derivatives.
    West MD, Sargent RG, Long J, Brown C, Chu JS, Kessler S, Derugin N, Sampathkumar J, Burrows C, Vaziri H, Williams R, Chapman KB, Larocca D, Loring JF, Murai J. Regen Med. 2008 May;3(3):287-308.PMID: 18462054 [PubMed - indexed for MEDLINE] Related articles    Free article
15. Comprehensive microRNA profiling reveals a unique human embryonic stem cell signature dominated by a single seed sequence.
    Laurent LC, Chen J, Ulitsky I, Mueller FJ, Lu C, Shamir R, Fan JB, Loring JF.
    Stem Cells. 2008 Jun;26(6):1506-16. Epub 2008 Apr 10.PMID: 18403753 [PubMed - indexed for MEDLINE] Related articles   Free article 
16. Unraveling epigenetic regulation in embryonic stem cells.
    Bibikova M, Laurent LC, Ren B, Loring JF, Fan JB.
    Cell Stem Cell. 2008 Feb 7;2(2):123-34. Review.PMID: 18371433 [PubMed - indexed for MEDLINE] Related article 
17. Isolation of human embryonic stem cell-derived teratomas for the assessment of pluripotency.
    Gertow K, Przyborski S, Loring JF, Auerbach JM, Epifano O, Otonkoski T, Damjanov I, Ahrlund-Richter L.
    Curr Protoc Stem Cell Biol. 2007 Oct;Chapter 1:Unit1B.4.PMID: 18785162 [PubMed - indexed for MEDLINE] Related articles
18. Adhesive interactions between human neural stem cells and inflamed human vascular endothelium are mediated by integrins.
    Mueller FJ, Serobyan N, Schraufstatter IU, DiScipio R, Wakeman D, Loring JF, Snyder EY, Khaldoyanidi SK.
    Stem Cells. 2006 Nov;24(11):2367-72.PMID: 17071855 [PubMed - indexed for MEDLINE] Related articles Free article
19. Human embryonic stem cells have a unique epigenetic signature.
    Bibikova M, Chudin E, Wu B, Zhou L, Garcia EW, Liu Y, Shin S, Plaia TW, Auerbach JM, Arking DE, Gonzalez R, Crook J, Davidson B, Schulz TC, Robins A, Khanna A, Sartipy P, Hyllner J, Vanguri P, Savant-Bhonsale S, Smith AK, Chakravarti A, Maitra A, Rao M, Barker DL, Loring JF, Fan JB.
    Genome Res. 2006 Sep;16(9):1075-83. Epub 2006 Aug 9.PMID: 16899657 [PubMed - indexed for MEDLINE] Related articles    Free articl 
20. Cryopreservation by slow cooling with DMSO diminished production of Oct-4 pluripotency marker in human embryonic stem cells.
    Katkov II, Kim MS, Bajpai R, Altman YS, Mercola M, Loring JF, Terskikh AV, Snyder EY, Levine F.
    Cryobiology. 2006 Oct;53(2):194-205. Epub 2006 Jul 12.PMID: 16839540 [PubMed - indexed for MEDLINE] Related articles
     
21. Genome wide profiling of human embryonic stem cells (hESCs), their derivatives and embryonal carcinoma cells to develop base profiles of U.S. Federal government approved hESC lines.
    Liu Y, Shin S, Zeng X, Zhan M, Gonzalez R, Mueller FJ, Schwartz CM, Xue H, Li H, Baker SC, Chudin E, Barker DL, McDaniel TK, Oeser S, Loring JF, Mattson MP, Rao MS.
    BMC Dev Biol. 2006 May 3;6:20.PMID: 16672070 [PubMed - indexed for MEDLINE] Related articles Free article 
    
    
22. Transcriptome coexpression map of human embryonic stem cells.
    Li H, Liu Y, Shin S, Sun Y, Loring JF, Mattson MP, Rao MS, Zhan M.
    BMC Genomics. 2006 May 2;7:103.PMID: 16670017 [PubMed - indexed for MEDLINE] Related articles Free article
     
23. Science and law. Intellectual property and human embryonic stem cell research.
    Loring JF, Campbell C.
    Science. 2006 Mar 24;311(5768):1716-7. No abstract available. PMID: 16556826 [PubMed - indexed for MEDLINE] Related articles
     
24. Beyond fraud--stem-cell research continues.
    Snyder EY, Loring JF.
    N Engl J Med. 2006 Jan 26;354(4):321-4. No abstract available. PMID: 16436761 [PubMed - indexed for MEDLINE] Related articles
     
25. Gene therapy: can neural stem cells deliver?
    Müller FJ, Snyder EY, Loring JF.
    Nat Rev Neurosci. 2006 Jan;7(1):75-84. Review. Erratum in: Nat Rev Neurosci. 2006 Feb;7(2):167. PMID: 16371952 [PubMed - indexed for MEDLINE] Related articles
     
26. At the interface of the immune system and the nervous system: how neuroinflammation modulates the fate of neural progenitors in vivo.
    Mueller FJ, McKercher SR, Imitola J, Loring JF, Yip S, Khoury SJ, Snyder EY.
    Ernst Schering Res Found Workshop. 2005;(53):83-114. Review.PMID: 16315610 [PubMed - indexed for MEDLINE] Related articles
     
27. NTera2: a model system to study dopaminergic differentiation of human embryonic stem cells.
    Schwartz CM, Spivak CE, Baker SC, McDaniel TK, Loring JF, Nguyen C, Chrest FJ, Wersto R, Arenas E, Zeng X, Freed WJ, Rao MS.
    Stem Cells Dev. 2005 Oct;14(5):517-34.PMID: 16305337 [PubMed - indexed for MEDLINE] Related articles
     
28. Assessing self-renewal and differentiation in human embryonic stem cell lines.
    Cai J, Chen J, Liu Y, Miura T, Luo Y, Loring JF, Freed WJ, Rao MS, Zeng X.
    Stem Cells. 2006 Mar;24(3):516-30. Epub 2005 Nov 17.PMID: 16293578 [PubMed - indexed for MEDLINE] Related articles Free article
     
29. Establishing standards for the characterization of human embryonic stem cell lines.
    Loring JF, Rao MS.
    Stem Cells. 2006 Jan;24(1):145-50. Epub 2005 Oct 27.PMID: 16253979 [PubMed - indexed for MEDLINE] Related articles Free article 
    
    
30. Evolution of microarray analysis.
    Loring JF.
    Neurobiol Aging. 2006 Aug;27(8):1084-6. Epub 2005 Sep 13. Review.PMID: 16165253 [PubMed - indexed for MEDLINE] Related articles
     
31. A role for stem cell biology in the physiological and pathological aspects of aging.
    Snyder EY, Loring JF.
    J Am Geriatr Soc. 2005 Sep;53(9 Suppl):S287-91.PMID: 16131354 [PubMed - indexed for MEDLINE] Related articles 
    
    
32. Selectively reduced expression of synaptic plasticity-related genes in amyloid precursor protein + presenilin-1 transgenic mice.
    Dickey CA, Loring JF, Montgomery J, Gordon MN, Eastman PS, Morgan D.
    J Neurosci. 2003 Jun 15;23(12):5219-26.PMID: 12832546 [PubMed - indexed for MEDLINE] Related articles Free article
     
33. Complexity of inflammatory responses in endothelial cells and vascular smooth muscle cells determined by microarray analysis.
    Bandman O, Coleman RT, Loring JF, Seilhamer JJ, Cocks BG.
    Ann N Y Acad Sci. 2002 Dec;975:77-90.PMID: 12538156 [PubMed - indexed for MEDLINE] Related articles
     
34. A gene expression profile of embryonic stem cells and embryonic stem cell-derived neurons.
    Loring JF, Porter JG, Seilhammer J, Kaser MR, Wesselschmidt R.
    Restor Neurol Neurosci. 2001;18(2-3):81-8.PMID: 11847430 [PubMed - indexed for MEDLINE] Related articles
     
35. A gene expression profile of Alzheimer's disease.
    Loring JF, Wen X, Lee JM, Seilhamer J, Somogyi R.
    DNA Cell Biol. 2001 Nov;20(11):683-95. Erratum in: DNA Cell Biol 2002 Mar;21(3):241. PMID: 11788046 [PubMed - indexed for MEDLINE] Related articles
     
36. The nature of religion.
    Loring JF.
    Neurobiol Aging. 2001 Jan-Feb;22(1):157; discussion 161-3. No abstract available. PMID: 11164291 [PubMed - indexed for MEDLINE] Related articles
     
37. High-throughput quantitative histological analysis of Alzheimer's disease pathology using a confocal digital microscanner.
    Hanzel DK, Trojanowski JQ, Johnston RF, Loring JF.
    Nat Biotechnol. 1999 Jan;17(1):53-7.PMID: 9920269 [PubMed - indexed for MEDLINE] Related articles
     
38. Twofold overexpression of human beta-amyloid precursor proteins in transgenic mice does not affect the neuromotor, cognitive, or neurodegenerative sequelae following experimental brain injury.
    Murai H, Pierce JE, Raghupathi R, Smith DH, Saatman KE, Trojanowski JQ, Lee VM, Loring JF, Eckman C, Younkin S, McIntosh TK.
    J Comp Neurol. 1998 Mar 23;392(4):428-38.PMID: 9514508 [PubMed - indexed for MEDLINE] Related articles 
39. Phenotypic analysis of mice expressing exclusively apolipoprotein B48 or apolipoprotein B100.
    Farese RV Jr, Véniant MM, Cham CM, Flynn LM, Pierotti V, Loring JF, Traber M, Ruland S, Stokowski RS, Huszar D, Young SG.
    Proc Natl Acad Sci U S A. 1996 Jun 25;93(13):6393-8.PMID: 8692825 [PubMed - indexed for MEDLINE] Related articles Free article 
    
    
40. Rational design of an animal model for Alzheimer's disease: introduction of multiple human genomic transgenes to reproduce AD pathology in a rodent.
    Loring JF, Paszty C, Rose A, McIntosh TK, Murai H, Pierce JE, Schramm SR, Wymore K, Lee VM, Trojanowski JQ, Peterson KR.
    Neurobiol Aging. 1996 Mar-Apr;17(2):173-82.PMID: 8744398 [PubMed - indexed for MEDLINE] Related articles 
41. Lethal alpha-thalassaemia created by gene targeting in mice and its genetic rescue.
    Pászty C, Mohandas N, Stevens ME, Loring JF, Liebhaber SA, Brion CM, Rubin EM.
    Nat Genet. 1995 Sep;11(1):33-9.PMID: 7550311 [PubMed - indexed for MEDLINE] Related articles 
42. Expression of APP in brains of transgenic mice containing the entire human APP gene.
    Buxbaum JD, Christensen JL, Ruefli AA, Greengard P, Loring JF.
    Biochem Biophys Res Commun. 1993 Dec 15;197(2):639-45.PMID: 8267600 [PubMed - indexed for MEDLINE] Related articles 
43. Transgenic mice containing a human heavy chain immunoglobulin gene fragment cloned in a yeast artificial chromosome.
    Choi TK, Hollenbach PW, Pearson BE, Ueda RM, Weddell GN, Kurahara CG, Woodhouse CS, Kay RM, Loring JF.
    Nat Genet. 1993 Jun;4(2):117-23. Erratum in: Nat Genet 1993 Jul;4(3):320. PMID: 8348148 [PubMed - indexed for MEDLINE] Related articles 
44. Immunoglobulin gene rearrangement in B cell deficient mice generated by targeted deletion of the JH locus.
    Chen J, Trounstine M, Alt FW, Young F, Kurahara C, Loring JF, Huszar D.
    Int Immunol. 1993 Jun;5(6):647-56.PMID: 8347558 [PubMed - indexed for MEDLINE] Related articles 
45. B cell development in mice that lack one or both immunoglobulin kappa light chain genes.
    Chen J, Trounstine M, Kurahara C, Young F, Kuo CC, Xu Y, Loring JF, Alt FW, Huszar D.
    EMBO J. 1993 Mar;12(3):821-30.PMID: 8458340 [PubMed - indexed for MEDLINE] Related articles Free article 
46. Migratory pathways of HNK-1-immunoreactive neural crest cells in the rat embryo.
    Erickson CA, Loring JF, Lester SM.
    Dev Biol. 1989 Jul;134(1):112-8.PMID: 2659408 [PubMed - indexed for MEDLINE] Related articles 
47. Survival and function of aggregate cultures of rat fetal dopamine neurons grafted in a rat model of Parkinson's disease.
    Strecker RE, Miao R, Loring JF.
    Exp Brain Res. 1989;76(2):315-22.PMID: 2569985 [PubMed - indexed for MEDLINE] Related articles 
48. Migration and differentiation of neural crest and ventral neural tube cells in vitro: implications for in vitro and in vivo studies of the neural crest.
    Loring JF, Barker DL, Erickson CA.
    J Neurosci. 1988 Mar;8(3):1001-15.PMID: 3346712 [PubMed - indexed for MEDLINE] Related articles 
49. Neural crest cell migratory pathways in the trunk of the chick embryo.
    Loring JF, Erickson CA.
    Dev Biol. 1987 May;121(1):220-36.PMID: 3552788 [PubMed - indexed for MEDLINE] Related articles 
50. Sprouting and functional regeneration of an identified serotonergic neuron following axotomy. 
    Murphy AD, Barker DL, Loring JF, Kater SB.
    J Neurobiol. 1985 Mar;16(2):137-51.PMID: 2985748 [PubMed - indexed for MEDLINE] Related articles

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