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Genomics and Microarray Data Analysis

The Genomics focus area centers primarily around Next-Generation Sequencing (NGS) and RNA Microarrays, along with statistical data analysis on primary data and downstream functional analyses.

NGS and microarray data analysis services include:

  • RNA-Seq and microRNA-Seq data analysis
  • CHIP-Seq data analysis
  • Custom Bioinformatics workflows for NGS applications (RNA-Seq, ChIP-Seq, microRNA-Seq)
  • Gene expression analysis of in house and published microarray datasets (Affymetrix, Illumina, ...)
  • Quality control, alignment/mapping
  • de novo genome/transcriptome assembly (in the absence of a reference genome)
  • Integration and application of published and popular algorithms/tools
  • Multiple genome browser support for visualization of NGS results
  • Develop and integrate data analysis and visualization tools, including leveraging of R and other programming languages
  • Establishing and maintaining customized genomic databases

Personnel:

Genomics Core Florida Campus

Genomics Core California Campus